Definition Vibrio harveyi ATCC BAA-1116 chromosome I, complete genome.
Accession NC_009783
Length 3,765,351

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Identifier: 156975483

GI number:

Start: 3238930

End: 3240516

Strand: Direct

Name: Not Available

Synonym: VIBHAR_03214

Alternate gene names: NA

Gene position: NA

Preceding gene: 156975482

Following gene: 156975485

Centisome position: NA

GC content: NA

Gene sequence:

>1587_bases
ATGCGTTTAAAGTACAGTTGGGCGTTGGCGTTACTACTTTCTGGCTGTCAATTGACACAGTCAGATTCAACAAACACTCC
AACACCAGAAACCAATAAGTCCGAGCAAGCGGTAAAACAAGACGCGGCTCAAGCGGACTCCAAGAAAAAGCTATCGATAG
CAAAGAAACCTGCTAAAGAGACGCCGAAAACTCTTTCTCCTCAGGAACAAGAAGATGTATGGCGTCGTATCGGCATACAG
CTTGAGATGGACATCCCAGACAACAAGAAAGTGGCTTACTACCGTACATGGTATCTGAAGCATCCTAACCACCTGCGCAC
CGTTTCTGAGCGTGCACAGCCGTTTTTGTACATGATTACAAAACGCATTGAAGAACGTGGTCTTCCAATGGAGTTGGCGC
TTCTACCTATCGTAGAGAGCTCATTTGACCCATTCGCGTACTCACACGGCAGTGCGGCAGGTCTTTGGCAGTTCGTTCCT
GGCACCGGCAAGATGATGGGCCTAGAGCAAAACTACTGGTACGACGGTCGTCGTGATGTGTACGCAGCGACAGATGCTGC
TCTTGATTACCTAGAGCAACAAAGCGAGCGCTTTGACGGTAACTGGGACCAAGCGATTGCCGCTTACAACAGTGGTGGCG
GTCGTGTATCAAGCGCGATTCGTAAGAACAAAAAGCTAGGTAAACCTACAGACTTCTTCTCTTTGGACCTTCCAAAAGAG
ACCAGCAGTTACGTTCCTAAGCTACTTGCGCTTGCAGACATCATTGCGAACCAAGACAAATACGGCATCGACATTCCACC
AATCGCGAACAAACCTGTTCTGGTTCAGGTTGATCCAAAAGAACAATTAGACCTAGCGATTGCTGCCGATTACGCAGGCA
TTGGTGTCAAAGAGCTGCAAGGTTACAACCCGGCTTACAACCAATGGTCTACGGCACCTGACGGCCCGCACCAGCTTCTT
ATTCCTATCGAGAAAAAGGATCAGTTCCTTGCTCAGGTGAAAAAGAACCGTGGTAAAGGCATGAAGGTCGCACGCTACAA
AGTGAAGCGTGGTGACTCGCTCAGCGTATTGGCTCAGAAGTACGGTACGACAACCAAAGTTATCCAACGTGCTAACGGCC
TAACCAACAACAACATTCGCGTTGGTCAGTACCTAATGATCCCAACGTCAACTAAAGACGATGCTAAGTACGCACTTACT
GCGGAAAATCGCCTAAACAAAACGCAATCTAAATCTCGCGGTCAATTCAAACTGACTCACGTTGTCCAACCTGGTGAGAG
CTTGTGGTCTATCGCAAAAGAGAACAAGGTTTCTCATAAGTCTCTAGCGAAATGGAACGGCATGGGACCAAAAGACACCT
TGCGCATTGGCCAAAAGCTGGTGATTTGGAAGAACTCAGACAAGGGCGCCGTCATTCGCACCGTTTTCTATAACGTGCGT
TCTGGCGATACCATCAGTGGCATTGCGAGTAAGTTTAAGGTGAAGAGCAACGACATCGTGAAATGGAATTCTCTTCAAAA
GCAGAAGTACCTGAAACCAGGTCAGAAGCTTAAGTTGTATGTTGACGTAACTAAGGTAAGTGTATGA

Upstream 100 bases:

>100_bases
CTTAGTTAGTGTTACAAGATGTCTATTATCTTGCGACTGCCACGCACATTGTTGCGCGACAGGCAGGAGAAGATAAACAG
GCCCTAGATAGGCTGAATCC

Downstream 100 bases:

>100_bases
ACCCATCGAGTAACCCGCTTGTAATGTTGTTGGATATTTTCCGTTCTCCAACATCGTGCTTCCTAGCGCTGTATCAGCGT
GGAGGCTGGGGGTGGCAACC

Product: membrane-bound lytic murein transglycosylase D

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>528_residues
MRLKYSWALALLLSGCQLTQSDSTNTPTPETNKSEQAVKQDAAQADSKKKLSIAKKPAKETPKTLSPQEQEDVWRRIGIQ
LEMDIPDNKKVAYYRTWYLKHPNHLRTVSERAQPFLYMITKRIEERGLPMELALLPIVESSFDPFAYSHGSAAGLWQFVP
GTGKMMGLEQNYWYDGRRDVYAATDAALDYLEQQSERFDGNWDQAIAAYNSGGGRVSSAIRKNKKLGKPTDFFSLDLPKE
TSSYVPKLLALADIIANQDKYGIDIPPIANKPVLVQVDPKEQLDLAIAADYAGIGVKELQGYNPAYNQWSTAPDGPHQLL
IPIEKKDQFLAQVKKNRGKGMKVARYKVKRGDSLSVLAQKYGTTTKVIQRANGLTNNNIRVGQYLMIPTSTKDDAKYALT
AENRLNKTQSKSRGQFKLTHVVQPGESLWSIAKENKVSHKSLAKWNGMGPKDTLRIGQKLVIWKNSDKGAVIRTVFYNVR
SGDTISGIASKFKVKSNDIVKWNSLQKQKYLKPGQKLKLYVDVTKVSV

Sequences:
NA

Specific function: NA

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA