Definition Vibrio harveyi ATCC BAA-1116 chromosome I, complete genome.
Accession NC_009783
Length 3,765,351

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Identifier: 156975191

GI number:

Start: 2936837

End: 2939944

Strand: Direct

Name: Not Available

Synonym: VIBHAR_02918

Alternate gene names: NA

Gene position: NA

Preceding gene: 156975189

Following gene: 156975193

Centisome position: NA

GC content: NA

Gene sequence:

>3108_bases
ATGAAAAGAATGTTAATTAACGCAACTCAAAAAGAAGAGTTGCGTGTCGCTCTGGTTGATGGCCAGCGACTTTTCGATCT
TGATATCGAGAGTCCAGGTCATGAATCTAAAAAAGCGAATATCTACAAAGGACGTATCACACGTATCGAACCAAGCTTAG
AAGCCGCATTTGTTGACTACGGTGCTGAGCGTCACGGTTTCCTTCCTCTTAAAGAAATTGCCCGCGAATACTTCCCTGAA
GGTTACACTTACCAAGGCCGTCCTAGCATTAAAGAAGTGCTAACAGAAGGCCAAGAAGTGATCGTGCAAGTGGAAAAAGA
AGAACGTGGTAGCAAGGGCGCAGCTCTAACTACTTTCATCTCTCTTGCGGGTAGCTACCTTGTTCTTATGCCTAATAACC
CTCGTGCCGGCGGTATTTCTCGTCGTATCGAAGGTGATGAGCGTACACAACTTAAAGCTGCACTAAGCACTCTGGAATTG
CCTCAAGGCATGGGCCTGATTGTTCGTACTGCTGGCGTTGGCAAGAGCGCAGAAGAACTAGAGTGGGATTTGAACGTACT
ACTTAACCACTGGAGCGCGATTAAGGGCGCGGCAGATTCTAACCCTGCCCCATTCCTAATCCACCAGGAAAGTAACGTAA
TCGTTCGTGCAATCCGTGACTACCTACGTCGTGATATCGGTGAAATCCTAATCGACAGCAACACCATTTATGAGCGTGCT
AAAGAGCACATCAAATTGGTTCGTCCTGATTTCATCAGCCGCGTTAAAAAATACGATGGCGAAGTACCACTGTTCAGCCA
CTACCAAATCGAAAGCCAAATTGAATCGGCTTTCCAACGTGAAGTGCGCTTACCATCTGGTGGTTCTATCGTAATCGACC
CAACAGAAGCACTGACTTCTATCGATATCAACTCTGCTCGCGCAACGAAAGGCGGCGATATCGAAGAAACAGCACTTAAT
ACCAACCTAGAAGCAGCAGACGAAATCGCTCGTCAATTGCGTCTACGTGACCTTGGTGGTCTGGTTGTTATCGACTTCAT
CGATATGACGCCAGTACGCCACCAGCGTGAAGTTGAAAACCGTCTACGTGAAGCCGTTCGTCTAGATCGCGCCCGCGTTC
AAATCGGTCGCATTTCTCGCTTCGGTCTTTTGGAAATGTCTCGTCAACGTTTGAGCCCTTCTCTAGCGGAAGCAAGCCAC
CATATTTGTCCTCGTTGTACGGGTACAGGTGTGGTTCGTGACAACGAGTCTCTAGCACTTTCTGTTCTTCGTCTTATTGA
AGAAGAAGCGCTTAAGGACAACACAGCACAAGTACTTGCTGTGGTACCTGTGCCAATCGCGTCTTACCTTCTAAACGAAA
AACGTCGCTCTGTGAACCACATTGAACGCACTCAAGAAGTGAAGATCACTGTTGTTCCTAACTCAGACATGGAAACGCCT
CACTTTGAAGTTATCCGTGTTCGTGAGGGTGAAGAGTTCGACCTGCTTTCTTACCTACTTCCTAAGAAACTGGAAGCGAT
GAAAGAAGCAGAAGGCAAAGAGCCTGCAGAAGTTGATATTAAGCCTAAGCGCATCGAAGAGCCTGTACTGAAAGGTTTCG
CAGCGCCAACGCAAACTGCACCAGCTCCTGCAGCAACGTCTAAACCTGCACCAGCTGCGAAGAAGAAAGAAGCTGCGCCA
CAGGAAGAAAAACCAGGTCTAATCAGCCGTATGTTTAAAGCGCTTGGCAGTTTCCTATTCGGTGGTTCTGAAGAAGTAAA
AGAAGAGCCTAAGAAAGAAGAGAAGAAGCCAAACCGCGATAACAAGCGCAACAAACGTGACCGCAACGATCGTCGTCGCA
ACAACAACCAACGCGATAACCGCGAAGGTCGTGACAACCGCGATAACAAACGTCGCCGTAAGCCACGTGAAGAGCAAGCG
ACTGAGCAAAACGAAACGCAACAGCAGCCTAATAAGCAGCAAAACCGCAACCAGAAACGTAAGCCTAGAGCTCAACAAGC
TGAAAAAGCACAAGAGCCAAAAGCAAATGCGAAGGTAGCGGAAAAAGGTCTGCAACTTGCCGCTGAAGCACGCACTGGTA
CAGAAGCGAAGCCGGAAGAAAGCAAAGCGAAGTCAAACGCGAAAGCAGAGAAAGTGAAAGAGCGCCGTCAGCGTCGCAAA
CTGAACAAATCTGTACGCGTTAAAGATCAGCAAGCGGCAGAGAAAGCTGAACAGGAAGTACCTGTACAAACAATCGTTGA
AGCGGTTGAAGCACCTGTTGAAAAGCCAGTTGAGGCAGCAGCAGAAGCACAACAAGACAACAAAGCAGAATCTAAACAGC
GTCGTAACCGTCGTTCACCACGTCACCTACGTGCAAGTGGCCAACGTCGTCGTCGCGGTCGCGATCGTCGCCCTAACCCA
TTCCGCCTACGCAAAGGTGGTGTAGCCTCTCCTGAGATGGCAATGGGTAAAGTAATGCCACGCTACATTCCAAAACCAGC
GCCTAAGAAGGAAGAGCGAGTGAAGGAAGAAGCAGCGGTTGTTGCAACAGCAGTACCTGCAATCCAAGGTGGTTTTGCTT
GTCCTGAAATGGCGATGGGTAAAGTGATCATTCGCCGTGAGCAACCTGCAGTCGTTGAAGCGCCAGTAGTTGAACCAAAA
GTTCAACAACCTGTAGAAACGAAAGTAGAAGCTCCAGTTGTAGAAACACCGGTTGCAGCAGCACCAGTAGTTGAAGCAGC
AGTTGTAGAGCAAGCTGAAACTGTAGCAGCAGAAGCGACACCAGTTGAGCCAATCGTAGAAGCACCTGTAGTTGAAACAA
CTGAAACTGCAGTAGCAGAAGCGGCGCCAACTCAAGAGCCAGTAGTCGAAGTAGTAGCAGAAACTGTAGAACAAGTTCCA
GCGGAAGCGAAAGTAGAAACACCAGAGCCTAAAGCAGAAGTTATCAAGGTAGCGACCAAGCCACGTGCGATCGCACCGAT
GACAAAAGCGCCGGGTCCTCAAGAGCTTCGCGAAATCACCGTTACAGCAGCACCGTTTAAAGCTGAACGCTACGCACCGA
AAGGCGCAGGTAGCCAAGTAGCAACAAACCGTGCGTCTGCAGGTATGACAAAGCCAAACTTTAGCTAA

Upstream 100 bases:

>100_bases
AGGCTGCAAAATATAGCCATGGGATCAGGCACCGTGAAAGAGTGAAAAAACAGTGGCAAGTTGCAAAGAAAGATAAAGAA
AAGACAACGAGAAATTTTCA

Downstream 100 bases:

>100_bases
GTTGTAATTTGTCTTTACACAAAGCGAAAAGCTAATGAAAAGGCTGCCGATCGGCCTGTCTCTTGATCACAAGTCTAGTG
ATCAAGAGACATTGCGAGTT

Product: ribonuclease E

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1035_residues
MKRMLINATQKEELRVALVDGQRLFDLDIESPGHESKKANIYKGRITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPE
GYTYQGRPSIKEVLTEGQEVIVQVEKEERGSKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDERTQLKAALSTLEL
PQGMGLIVRTAGVGKSAEELEWDLNVLLNHWSAIKGAADSNPAPFLIHQESNVIVRAIRDYLRRDIGEILIDSNTIYERA
KEHIKLVRPDFISRVKKYDGEVPLFSHYQIESQIESAFQREVRLPSGGSIVIDPTEALTSIDINSARATKGGDIEETALN
TNLEAADEIARQLRLRDLGGLVVIDFIDMTPVRHQREVENRLREAVRLDRARVQIGRISRFGLLEMSRQRLSPSLAEASH
HICPRCTGTGVVRDNESLALSVLRLIEEEALKDNTAQVLAVVPVPIASYLLNEKRRSVNHIERTQEVKITVVPNSDMETP
HFEVIRVREGEEFDLLSYLLPKKLEAMKEAEGKEPAEVDIKPKRIEEPVLKGFAAPTQTAPAPAATSKPAPAAKKKEAAP
QEEKPGLISRMFKALGSFLFGGSEEVKEEPKKEEKKPNRDNKRNKRDRNDRRRNNNQRDNREGRDNRDNKRRRKPREEQA
TEQNETQQQPNKQQNRNQKRKPRAQQAEKAQEPKANAKVAEKGLQLAAEARTGTEAKPEESKAKSNAKAEKVKERRQRRK
LNKSVRVKDQQAAEKAEQEVPVQTIVEAVEAPVEKPVEAAAEAQQDNKAESKQRRNRRSPRHLRASGQRRRRGRDRRPNP
FRLRKGGVASPEMAMGKVMPRYIPKPAPKKEERVKEEAAVVATAVPAIQGGFACPEMAMGKVIIRREQPAVVEAPVVEPK
VQQPVETKVEAPVVETPVAAAPVVEAAVVEQAETVAAEATPVEPIVEAPVVETTETAVAEAAPTQEPVVEVVAETVEQVP
AEAKVETPEPKAEVIKVATKPRAIAPMTKAPGPQELREITVTAAPFKAERYAPKGAGSQVATNRASAGMTKPNFS

Sequences:
NA

Specific function: NA

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA