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The map label for this gene is tgtA [H]

Identifier: 156937950

GI number: 156937950

Start: 1036377

End: 1036844

Strand: Direct

Name: tgtA [H]

Synonym: Igni_1162

Alternate gene names: 156937950

Gene position: 1036377-1036844 (Clockwise)

Preceding gene: 156937949

Following gene: 156937951

Centisome position: 79.87

GC content: 59.83

Gene sequence:

>468_bases
GTGAATCCCAGCCCTCCTCACCGCTCGGGGCGGCGATCGACACCTCATCCCCTCTTGTTGAGGCGCTTGCTACACTACAT
CTACGGCGCCGAGCCCCAGTGTAGCTTGGAGGGGGTGACGGTAAAGTACTCGAAGACCGGGAAGCCGCGCTACGTCCTCA
TGAATGGGAAGAGGCTCTTCACCATCAAGCCCAACGACATGTCCGTAACCCTCTCCCCGGAGGGGGCCGCTTTCTTGGAG
GGCTGCTTCCCCCCTAAGGTAGCTAGGGTCTACGTCAGCGAGGTCCCCGAGAAAACGGTGTTCGCCAAGCACGTGATAGA
CGCAGACGAGGGGATAAGGAGGGGCGTAGACGTTTTAATAATATACGAGTCGCGGCTGGTGGCCTTCGGTAAGGCGCTGA
TGTCCGGGAGGGAGATGAAGGAGCTTAATTTGGGCGAGGCCGCGAGGGTTAGGGGTAAGGTGCCGTGA

Upstream 100 bases:

>100_bases
TGGCGAGCCCCATCTTGGTCTTGCTCGGAGGGGCGCTGGGCGGGGCGCTGGCCTACGCGCTCTCCTCGGCGCTCCTCAAC
GCTTGTGGGGGTGCGGGTCA

Downstream 100 bases:

>100_bases
GGAAGGTCAAGTTCGTCCCCACCGGCGAGGGGCCCGAGGACCTCAAGGGCTCATTGCTCGTCACGGGCTTCATGGGCTTC
GGCCTAGTGGGCTTCATAGC

Product: PUA domain-containing protein

Products: NA

Alternate protein names: Archaeal tRNA-guanine transglycosylase [H]

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNPSPPHRSGRRSTPHPLLLRRLLHYIYGAEPQCSLEGVTVKYSKTGKPRYVLMNGKRLFTIKPNDMSVTLSPEGAAFLE
GCFPPKVARVYVSEVPEKTVFAKHVIDADEGIRRGVDVLIIYESRLVAFGKALMSGREMKELNLGEAARVRGKVP

Sequences:

>Translated_155_residues
MNPSPPHRSGRRSTPHPLLLRRLLHYIYGAEPQCSLEGVTVKYSKTGKPRYVLMNGKRLFTIKPNDMSVTLSPEGAAFLE
GCFPPKVARVYVSEVPEKTVFAKHVIDADEGIRRGVDVLIIYESRLVAFGKALMSGREMKELNLGEAARVRGKVP
>Mature_155_residues
MNPSPPHRSGRRSTPHPLLLRRLLHYIYGAEPQCSLEGVTVKYSKTGKPRYVLMNGKRLFTIKPNDMSVTLSPEGAAFLE
GCFPPKVARVYVSEVPEKTVFAKHVIDADEGIRRGVDVLIIYESRLVAFGKALMSGREMKELNLGEAARVRGKVP

Specific function: Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs [H]

COG id: COG1370

COG function: function code O; Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004804
- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR002616
- InterPro:   IPR004521 [H]

Pfam domain/function: PF01472 PUA; PF01702 TGT [H]

EC number: NA

Molecular weight: Translated: 17261; Mature: 17261

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS50890 PUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPSPPHRSGRRSTPHPLLLRRLLHYIYGAEPQCSLEGVTVKYSKTGKPRYVLMNGKRLF
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEE
TIKPNDMSVTLSPEGAAFLEGCFPPKVARVYVSEVPEKTVFAKHVIDADEGIRRGVDVLI
EECCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCEEEE
IYESRLVAFGKALMSGREMKELNLGEAARVRGKVP
EECCHHHHHHHHHHCCCCHHHCCCCCHHCCCCCCC
>Mature Secondary Structure
MNPSPPHRSGRRSTPHPLLLRRLLHYIYGAEPQCSLEGVTVKYSKTGKPRYVLMNGKRLF
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEE
TIKPNDMSVTLSPEGAAFLEGCFPPKVARVYVSEVPEKTVFAKHVIDADEGIRRGVDVLI
EECCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCEEEE
IYESRLVAFGKALMSGREMKELNLGEAARVRGKVP
EECCHHHHHHHHHHCCCCHHHCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]