Click here to switch to the map view.

The map label for this gene is ybjZ [C]

Identifier: 156937273

GI number: 156937273

Start: 426443

End: 427621

Strand: Reverse

Name: ybjZ [C]

Synonym: Igni_0479

Alternate gene names: 156937273

Gene position: 427621-426443 (Counterclockwise)

Preceding gene: 156937274

Following gene: 156937268

Centisome position: 32.96

GC content: 57.42

Gene sequence:

>1179_bases
ATGAAGTACGCGGAGCTCTTCCTTATGAGCTTAAAGGACATGAAGAGCGGCGGCTTGAGGTCCCTCTTAGTGGTCATGAG
CGTTGCGGTGGGCGCCGCGGCCTTGATAGCCTTCGTCTCCCAAGCGGAGGGCTTGAGGGTCAACGTGGAGAGGCAGTTCA
GGGGGCTGGCGGCGAACGTCATAATCTTGAGCGCGCGAGAGAGACCCTTTTCCTTGGAAGACGCCTTGGCCTTCAAGGCC
GTTGAGGGGGTCACGGACGTGTTCGGGGTTTCGGTGTTCAGAGCTAAGGTATCGGCCTCCGGGAAAGTCTGGATACTGAC
CTTCGTGGGGCTGAACGAAAAGGCGTTCTTCTCCCTTTTCCCCTCCGCGAAGCCGCGCCTAGGGCGCTTCTCCCTAGCCC
CCGGCACGGCGGTGGAGGGCTGGCAAGTGGCTAAGGAGGTCTTACTCCCCCCTGGCACAGTGAAGTTCCAAGTGGGTAAG
GAGGAGTACTACGTAACCGTCGTGGGAGCTTTGGAGAGCCTCGGCTCGAGCCTCTTCGGCTTCAACCCGGACAAGTCGAT
AATGGTCTCTGAGGAGCTAGGGACGAGGGTGGTCGGGGGTTACAATGTCCTCTACTTGGTCGCCGAGAGCCCCTCCAAGA
CGAAGGAAGTGTTGAAGAGGGTGAGGCCCTTGGCAGAGCTCATGGACGCCGAAGCCACCGCGCCCTTAAGTTTAATAAAC
ATGTACTCGTCCGCGGCGGAGTTCGCTGAGAGGTTCTTGTTCATGATGTCTATGATAGCTTTCGTTGCGTCTGGCTTCGG
AATAGCTAACACCATGATGATAACTGTCCTCGAGAGGAGGTCTGAAATAGCAGTTATGAAGGCAATAGGCTACTCCCCGA
GGGACATATTGCTTTACTACCTATTCTTGGCCTCATCCTTCGGGGTGGTAGGAGGAGCCATAGGCTCTGTAATAGGCTAC
TTCTTGGCGGACGCTGTGAACAAGTACGTTAATGTAATAGGGGCCCAGCTGAAGAGCTACATACAAGCGGAGTTCTTGAA
GACCGCCAAGGCTTACGTGAGCCCCCAGCTGGTCGCTGAGGCGGCGCTCTTCTCCGTGTTAACCGCCGTGGTCGCCGGCC
TCTACCCGGCCTACAAGGCCTCCAAGCTTGACCCCGTGGAGGCCCTCAGGGGGGAGTAA

Upstream 100 bases:

>100_bases
CCGAGAGCTTGGGGCCGGAGGCGATGGCCCTCGCCTTGGTGGTGCCAATAATTTTGCTCCTCTTAATTAAAAGGAGGAGG
TCCAAAACGGTGGTGATAGA

Downstream 100 bases:

>100_bases
GAGCGCCACGGCCTCTTCGGAGGCCAACGAGAGCTCCGCGAACGAGACGAGGGAAACGGCCTTCGCCTCCCCTCCCTCCC
AGAGGACGAGGACCTCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKYAELFLMSLKDMKSGGLRSLLVVMSVAVGAAALIAFVSQAEGLRVNVERQFRGLAANVIILSARERPFSLEDALAFKA
VEGVTDVFGVSVFRAKVSASGKVWILTFVGLNEKAFFSLFPSAKPRLGRFSLAPGTAVEGWQVAKEVLLPPGTVKFQVGK
EEYYVTVVGALESLGSSLFGFNPDKSIMVSEELGTRVVGGYNVLYLVAESPSKTKEVLKRVRPLAELMDAEATAPLSLIN
MYSSAAEFAERFLFMMSMIAFVASGFGIANTMMITVLERRSEIAVMKAIGYSPRDILLYYLFLASSFGVVGGAIGSVIGY
FLADAVNKYVNVIGAQLKSYIQAEFLKTAKAYVSPQLVAEAALFSVLTAVVAGLYPAYKASKLDPVEALRGE

Sequences:

>Translated_392_residues
MKYAELFLMSLKDMKSGGLRSLLVVMSVAVGAAALIAFVSQAEGLRVNVERQFRGLAANVIILSARERPFSLEDALAFKA
VEGVTDVFGVSVFRAKVSASGKVWILTFVGLNEKAFFSLFPSAKPRLGRFSLAPGTAVEGWQVAKEVLLPPGTVKFQVGK
EEYYVTVVGALESLGSSLFGFNPDKSIMVSEELGTRVVGGYNVLYLVAESPSKTKEVLKRVRPLAELMDAEATAPLSLIN
MYSSAAEFAERFLFMMSMIAFVASGFGIANTMMITVLERRSEIAVMKAIGYSPRDILLYYLFLASSFGVVGGAIGSVIGY
FLADAVNKYVNVIGAQLKSYIQAEFLKTAKAYVSPQLVAEAALFSVLTAVVAGLYPAYKASKLDPVEALRGE
>Mature_392_residues
MKYAELFLMSLKDMKSGGLRSLLVVMSVAVGAAALIAFVSQAEGLRVNVERQFRGLAANVIILSARERPFSLEDALAFKA
VEGVTDVFGVSVFRAKVSASGKVWILTFVGLNEKAFFSLFPSAKPRLGRFSLAPGTAVEGWQVAKEVLLPPGTVKFQVGK
EEYYVTVVGALESLGSSLFGFNPDKSIMVSEELGTRVVGGYNVLYLVAESPSKTKEVLKRVRPLAELMDAEATAPLSLIN
MYSSAAEFAERFLFMMSMIAFVASGFGIANTMMITVLERRSEIAVMKAIGYSPRDILLYYLFLASSFGVVGGAIGSVIGY
FLADAVNKYVNVIGAQLKSYIQAEFLKTAKAYVSPQLVAEAALFSVLTAVVAGLYPAYKASKLDPVEALRGE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=141, Percent_Identity=31.2056737588652, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 42219; Mature: 42219

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYAELFLMSLKDMKSGGLRSLLVVMSVAVGAAALIAFVSQAEGLRVNVERQFRGLAANV
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCEEEE
IILSARERPFSLEDALAFKAVEGVTDVFGVSVFRAKVSASGKVWILTFVGLNEKAFFSLF
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHEEC
PSAKPRLGRFSLAPGTAVEGWQVAKEVLLPPGTVKFQVGKEEYYVTVVGALESLGSSLFG
CCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEHHHHHHHHCHHHCC
FNPDKSIMVSEELGTRVVGGYNVLYLVAESPSKTKEVLKRVRPLAELMDAEATAPLSLIN
CCCCCCEEEEHHHCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
MYSSAAEFAERFLFMMSMIAFVASGFGIANTMMITVLERRSEIAVMKAIGYSPRDILLYY
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LFLASSFGVVGGAIGSVIGYFLADAVNKYVNVIGAQLKSYIQAEFLKTAKAYVSPQLVAE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
AALFSVLTAVVAGLYPAYKASKLDPVEALRGE
HHHHHHHHHHHHHHCCHHHCCCCCHHHHHCCC
>Mature Secondary Structure
MKYAELFLMSLKDMKSGGLRSLLVVMSVAVGAAALIAFVSQAEGLRVNVERQFRGLAANV
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCEEEE
IILSARERPFSLEDALAFKAVEGVTDVFGVSVFRAKVSASGKVWILTFVGLNEKAFFSLF
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHEEC
PSAKPRLGRFSLAPGTAVEGWQVAKEVLLPPGTVKFQVGKEEYYVTVVGALESLGSSLFG
CCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEHHHHHHHHCHHHCC
FNPDKSIMVSEELGTRVVGGYNVLYLVAESPSKTKEVLKRVRPLAELMDAEATAPLSLIN
CCCCCCEEEEHHHCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
MYSSAAEFAERFLFMMSMIAFVASGFGIANTMMITVLERRSEIAVMKAIGYSPRDILLYY
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LFLASSFGVVGGAIGSVIGYFLADAVNKYVNVIGAQLKSYIQAEFLKTAKAYVSPQLVAE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
AALFSVLTAVVAGLYPAYKASKLDPVEALRGE
HHHHHHHHHHHHHHCCHHHCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]