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The map label for this gene is hdrB [H]

Identifier: 156937214

GI number: 156937214

Start: 374817

End: 375605

Strand: Reverse

Name: hdrB [H]

Synonym: Igni_0420

Alternate gene names: 156937214

Gene position: 375605-374817 (Counterclockwise)

Preceding gene: 156937216

Following gene: 156937213

Centisome position: 28.95

GC content: 57.16

Gene sequence:

>789_bases
TTGCTTTGCCACTATCCCGGCTGTAGCACTAGGGGTATAGGCGAAGACATGGAAATTGCTACCAGAAACGTGTTGAAGGC
GTTGGGGGTGGAGTACAAGGAGATAGAGGGCTGGGTGTGCTGCGGCACCGGGGTCGTGGAGGACGCCTCCCCGTTGGGGA
CCGCCGTGCTGGTGGCCTCTAACTTGAGCCTCGCGAAGGAGCAAGGTTGCAGCAGCGTCTTCACCGCTTGCGGGATATGC
GCGGCCCAGCTGATGTTCTGGAAGGGGAGGATGATGAAGGAAGAACCCTTGAGAGAGGAGGTAAAGGACTTGTTAGAAAG
CAAACACTTGAAGTTCAACATAGACGTGAAGCTGCTCCACATACTCGACTTGCTGTTGGAGAACTTCAAGGAGGAGCACG
TGAAGAGGCCCTTGTACAACCTTAGGGTCTCCTTGTACCCCGGCTGCGGCGCGAAGAAGTTCTACAACTTCTACCAGGGT
AAGGACGTTTTCAAAATGATGGAAGAGGTGGTCAAGAGGACAGGGGCGGAGGTGGCGAGGAGGGTGGACACTTGCTGCGG
CTTCCCCTTAATGACTTACGACAAGAAGGTGGCGACGGACTTGGCTAGGAAGGTTGTCAGCGAGAGCGCGGGGGCGGACG
TGATAGTTACCTTGTGCCCCTTCTGCCAGTACCAGCTGGACACCTCCCAGAAGGGGGTGCCGGTCTGGCACCTCCACCAG
CTCGTGGGCTACGCGATGGGGCTTTCGGAGAAGGAGCTCGGCTTGGACAAGCACGTCAACAAGCTCTAG

Upstream 100 bases:

>100_bases
GCCCCCGAGAGCAGCCTCTCCCTTAGCTCCCGCATCCACGAGACCGTCGGAACAACAAAGGAATTTAATATTAAACTTGC
CGTCGCGTGAAGGGAAGGCC

Downstream 100 bases:

>100_bases
CGTGTCCCCCCGCGACCGCCCCGCCGTCACCGCCCGCCCGAGCGGCCTCCGGCGGGTGTGAGGGCGGGGGTTCCGTCACT
CGTATTAACTAGTTTTAAAA

Product: succinate dehydrogenase subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MLCHYPGCSTRGIGEDMEIATRNVLKALGVEYKEIEGWVCCGTGVVEDASPLGTAVLVASNLSLAKEQGCSSVFTACGIC
AAQLMFWKGRMMKEEPLREEVKDLLESKHLKFNIDVKLLHILDLLLENFKEEHVKRPLYNLRVSLYPGCGAKKFYNFYQG
KDVFKMMEEVVKRTGAEVARRVDTCCGFPLMTYDKKVATDLARKVVSESAGADVIVTLCPFCQYQLDTSQKGVPVWHLHQ
LVGYAMGLSEKELGLDKHVNKL

Sequences:

>Translated_262_residues
MLCHYPGCSTRGIGEDMEIATRNVLKALGVEYKEIEGWVCCGTGVVEDASPLGTAVLVASNLSLAKEQGCSSVFTACGIC
AAQLMFWKGRMMKEEPLREEVKDLLESKHLKFNIDVKLLHILDLLLENFKEEHVKRPLYNLRVSLYPGCGAKKFYNFYQG
KDVFKMMEEVVKRTGAEVARRVDTCCGFPLMTYDKKVATDLARKVVSESAGADVIVTLCPFCQYQLDTSQKGVPVWHLHQ
LVGYAMGLSEKELGLDKHVNKL
>Mature_262_residues
MLCHYPGCSTRGIGEDMEIATRNVLKALGVEYKEIEGWVCCGTGVVEDASPLGTAVLVASNLSLAKEQGCSSVFTACGIC
AAQLMFWKGRMMKEEPLREEVKDLLESKHLKFNIDVKLLHILDLLLENFKEEHVKRPLYNLRVSLYPGCGAKKFYNFYQG
KDVFKMMEEVVKRTGAEVARRVDTCCGFPLMTYDKKVATDLARKVVSESAGADVIVTLCPFCQYQLDTSQKGVPVWHLHQ
LVGYAMGLSEKELGLDKHVNKL

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 29265; Mature: 29265

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCHYPGCSTRGIGEDMEIATRNVLKALGVEYKEIEGWVCCGTGVVEDASPLGTAVLVAS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCEEEECCCCCCCCCCHHHHHHHHH
NLSLAKEQGCSSVFTACGICAAQLMFWKGRMMKEEPLREEVKDLLESKHLKFNIDVKLLH
CHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEECCHHHHH
ILDLLLENFKEEHVKRPLYNLRVSLYPGCGAKKFYNFYQGKDVFKMMEEVVKRTGAEVAR
HHHHHHHHHHHHHHHCCHHHCEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RVDTCCGFPLMTYDKKVATDLARKVVSESAGADVIVTLCPFCQYQLDTSQKGVPVWHLHQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHH
LVGYAMGLSEKELGLDKHVNKL
HHHHHHCCCHHHHCHHHHHCCC
>Mature Secondary Structure
MLCHYPGCSTRGIGEDMEIATRNVLKALGVEYKEIEGWVCCGTGVVEDASPLGTAVLVAS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCEEEECCCCCCCCCCHHHHHHHHH
NLSLAKEQGCSSVFTACGICAAQLMFWKGRMMKEEPLREEVKDLLESKHLKFNIDVKLLH
CHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEECCHHHHH
ILDLLLENFKEEHVKRPLYNLRVSLYPGCGAKKFYNFYQGKDVFKMMEEVVKRTGAEVAR
HHHHHHHHHHHHHHHCCHHHCEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RVDTCCGFPLMTYDKKVATDLARKVVSESAGADVIVTLCPFCQYQLDTSQKGVPVWHLHQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHH
LVGYAMGLSEKELGLDKHVNKL
HHHHHHCCCHHHHCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]