| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
Click here to switch to the map view.
The map label for this gene is 156937124
Identifier: 156937124
GI number: 156937124
Start: 290035
End: 290451
Strand: Reverse
Name: 156937124
Synonym: Igni_0330
Alternate gene names: NA
Gene position: 290451-290035 (Counterclockwise)
Preceding gene: 156937125
Following gene: 156937118
Centisome position: 22.38
GC content: 53.24
Gene sequence:
>417_bases GTGAATAGTAATGGTGCGTTTTCGAATATAGGATGTTCCCATGTGGGCAAAGATGAAAAGGAAATGAGTAAATACAAAGG TTTGGTGATTTGTAATATTGGAAGAAGGTCGTGTAAGAGTACCGACGCGCCTGCCATACAAAGGCTTACGTCGCGCGGGC CAGAAGGACCGCCCCACGCCCTCAGCGATCAACAGCCCAACGACTTGATAGACAAGGTATTGGGGGTAACCTACAAGCTC GAGGCAGCCTTGGCCCTGAAGGCCCTAGGCTACAGGGTGCCCAAGGACTTGTTGGAGGTGCCGTCTATCAGCTTGCGCAC CAAGGCTGAGAAGGCCTTCGTTTACGGCCTCGTGGGGTCCCCTCGTGGAAGGGACTCTTGGAGGAGGTTAGGAAGGTTAG CTTGCTGGAGGTCCTAA
Upstream 100 bases:
>100_bases AATTCCCCAAACTTTTCCCTTTATTCAAGAAATTTTTCCTCTGCCCTTCCCTCCACGATCTTCAGCGTTCCCATGAAAAG ATATAAGGGGGTTTGAGAGA
Downstream 100 bases:
>100_bases GCCCTGTCTCCCACCCCGAGCTCCGGTATGATTACCTTAAAGCCCTTGGACTTGAGGTAGTCCAGCGCGAGCAAGGTAGT GCCTCGAGGGCCCACGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MNSNGAFSNIGCSHVGKDEKEMSKYKGLVICNIGRRSCKSTDAPAIQRLTSRGPEGPPHALSDQQPNDLIDKVLGVTYKL EAALALKALGYRVPKDLLEVPSISLRTKAEKAFVYGLVGSPRGRDSWRRLGRLACWRS
Sequences:
>Translated_138_residues MNSNGAFSNIGCSHVGKDEKEMSKYKGLVICNIGRRSCKSTDAPAIQRLTSRGPEGPPHALSDQQPNDLIDKVLGVTYKL EAALALKALGYRVPKDLLEVPSISLRTKAEKAFVYGLVGSPRGRDSWRRLGRLACWRS >Mature_138_residues MNSNGAFSNIGCSHVGKDEKEMSKYKGLVICNIGRRSCKSTDAPAIQRLTSRGPEGPPHALSDQQPNDLIDKVLGVTYKL EAALALKALGYRVPKDLLEVPSISLRTKAEKAFVYGLVGSPRGRDSWRRLGRLACWRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15113; Mature: 15113
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNGAFSNIGCSHVGKDEKEMSKYKGLVICNIGRRSCKSTDAPAIQRLTSRGPEGPPHA CCCCCCCCCCCCHHCCCCHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCC LSDQQPNDLIDKVLGVTYKLEAALALKALGYRVPKDLLEVPSISLRTKAEKAFVYGLVGS CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHEEEEECCCC PRGRDSWRRLGRLACWRS CCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNSNGAFSNIGCSHVGKDEKEMSKYKGLVICNIGRRSCKSTDAPAIQRLTSRGPEGPPHA CCCCCCCCCCCCHHCCCCHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCC LSDQQPNDLIDKVLGVTYKLEAALALKALGYRVPKDLLEVPSISLRTKAEKAFVYGLVGS CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHEEEEECCCC PRGRDSWRRLGRLACWRS CCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA