| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
Click here to switch to the map view.
The map label for this gene is 156937043
Identifier: 156937043
GI number: 156937043
Start: 215236
End: 215619
Strand: Reverse
Name: 156937043
Synonym: Igni_0248
Alternate gene names: NA
Gene position: 215619-215236 (Counterclockwise)
Preceding gene: 156937047
Following gene: 156937037
Centisome position: 16.62
GC content: 49.74
Gene sequence:
>384_bases ATGATTTGTAAGCTTGAAGACTCTAGGACCTTCCGCTTGTACTACATCCCCATAGAGATAGTGTACGCTATCAAGAACTT GAAGGAGGGTTTCGGGGAGGTCCCCCGGAACGCGAGGAACTCCCTCTTCGACATATTGCCGTACTTCGAGAGCGTGATAG AGAATTTTAAGAGCGTTATAGAGAAGGTCGTAATAGACGAACTCGACGAGGACAGCGGCCTTTACACCGCCAAGCTGTTC TTGAACTTGGGTTCGGTGAAGCTCTCGATACCCATGATACCCAGCCACGCCATATATTTGGCCTTGATAACCGACAAGCC CATATACGTTGACGAAAAACTCTTGGAGAGGGAGTACGGGGAAGTCGGGGACTACGAGGACTGA
Upstream 100 bases:
>100_bases GGGAGCGAGCGCCTTGGAGGGCAGGCTGGTTAGGGTCGTCGACGTAGACGCGAGGATAGAAGAAATATACCAAAACGCCC ACCTAACGCCTATCACCGTC
Downstream 100 bases:
>100_bases ACCTTACCTCACGGGCTTCTGTTTTTTACCCTTCAGGATGGCGTCCAAGGATACCCCGTTCACCAGCACGACTTTGTACC TAACTCCCGGGATGTCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MICKLEDSRTFRLYYIPIEIVYAIKNLKEGFGEVPRNARNSLFDILPYFESVIENFKSVIEKVVIDELDEDSGLYTAKLF LNLGSVKLSIPMIPSHAIYLALITDKPIYVDEKLLEREYGEVGDYED
Sequences:
>Translated_127_residues MICKLEDSRTFRLYYIPIEIVYAIKNLKEGFGEVPRNARNSLFDILPYFESVIENFKSVIEKVVIDELDEDSGLYTAKLF LNLGSVKLSIPMIPSHAIYLALITDKPIYVDEKLLEREYGEVGDYED >Mature_127_residues MICKLEDSRTFRLYYIPIEIVYAIKNLKEGFGEVPRNARNSLFDILPYFESVIENFKSVIEKVVIDELDEDSGLYTAKLF LNLGSVKLSIPMIPSHAIYLALITDKPIYVDEKLLEREYGEVGDYED
Specific function: Unknown
COG id: COG1259
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14675; Mature: 14675
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICKLEDSRTFRLYYIPIEIVYAIKNLKEGFGEVPRNARNSLFDILPYFESVIENFKSVI CEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH EKVVIDELDEDSGLYTAKLFLNLGSVKLSIPMIPSHAIYLALITDKPIYVDEKLLEREYG HHHHHHCCCCCCCEEEEHEEEEECCEEEEECCCCCCEEEEEEECCCCCEECHHHHHHHCC EVGDYED CCCCCCC >Mature Secondary Structure MICKLEDSRTFRLYYIPIEIVYAIKNLKEGFGEVPRNARNSLFDILPYFESVIENFKSVI CEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH EKVVIDELDEDSGLYTAKLFLNLGSVKLSIPMIPSHAIYLALITDKPIYVDEKLLEREYG HHHHHHCCCCCCCEEEEHEEEEECCEEEEECCCCCCEEEEEEECCCCCEECHHHHHHHCC EVGDYED CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA