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The map label for this gene is 156936920

Identifier: 156936920

GI number: 156936920

Start: 111346

End: 112122

Strand: Reverse

Name: 156936920

Synonym: Igni_0125

Alternate gene names: NA

Gene position: 112122-111346 (Counterclockwise)

Preceding gene: 156936923

Following gene: 156936919

Centisome position: 8.64

GC content: 53.28

Gene sequence:

>777_bases
TTGAGTTCTCTTTCCCTGCGAAACGCGGACCAAAGCATGATACCGCTTTACGACATAAACGCGGTGAGGGGAAAATCGAT
AATTAACACGGCTATAATAACAATCAACGTATTAGTGTTCGTCGTGTTGGAGCTCCCCTTGCTACTGCAAGGAAACGTGC
TATCGTTTAACGAACTAGTGAAGAACTATGGCATGGTCCCGTACTTCGTCGTAAATGGTATGAGGGAATACACGCTCCTA
ACGCATATGTGGTTACACGGTAGCTTGGAGCACATAGCGGGGAACATGCTCTTCCTCTACATCTTTGGAGACAACGTCGA
AGCAGTCTTGGGGAGGAGGGGGTACTTGGCCCTCTACCTCCTCTCCGGATTAGGGGCGGTGGTCTTCCACTTGCTATCAG
TGATGCTAACGCCTTCAATCATCTTGAACCCGTACTTGAGACAGAACCCTTGGCTCACCCCGGCCATAGGGGCCTCGGGT
GCGATCAGCGGGGTCTTGGCAGCCTACATGCTCTTCTTCCCCCACGCCCAAGTGATGACACTCGTGTTCGCGCCTTACCC
CCTATTGATCCCGATAAGGGCGAGCGTCTTCATAGGCTTGTGGTTCCTCTACCAATTAATAATGGGCACTTGGAGCCTCA
GCGGAATGCCCACGGGGGTCGCTTGGTGGGCGCACATCGGAGGCTTCTTGACCGGGGCCGCCCTAGCGTACTTGCTAGCC
GACCGGAACAGAATAATTGAGCTGCGCCTAAGGGGGCGCTACGTCGTTTATATCTGA

Upstream 100 bases:

>100_bases
CTAAAACTTGCATGTATTCTCTTTTTAGTAGCACGGTCTTTCTCCGGCACGGCTCCCCGACGGGTGTATAAATATATCGG
ACCCCGCGGAGGACACGCTT

Downstream 100 bases:

>100_bases
CCTACTGGTCAAGGACCCGGGGAGGGGCCGTGAAGGAGATAGACCTGACCGCCCAAGACGTTGTATGTGGAGACATGATA
TCCAACATAGCCATGGCTGT

Product: rhomboid family protein

Products: NA

Alternate protein names: Peptidase; Rhomboid-Like Protein; Integral Membrane Protein; S54 Family Peptidase; Peptidase Protein; Transmembrane Rhomboid Family Protein; Subfamily; Rhomboid Serine Protease; Rhomboid Family Membrane Protein; Membrane Associated Serine Protease; Regulatory Proteins IclR

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSSLSLRNADQSMIPLYDINAVRGKSIINTAIITINVLVFVVLELPLLLQGNVLSFNELVKNYGMVPYFVVNGMREYTLL
THMWLHGSLEHIAGNMLFLYIFGDNVEAVLGRRGYLALYLLSGLGAVVFHLLSVMLTPSIILNPYLRQNPWLTPAIGASG
AISGVLAAYMLFFPHAQVMTLVFAPYPLLIPIRASVFIGLWFLYQLIMGTWSLSGMPTGVAWWAHIGGFLTGAALAYLLA
DRNRIIELRLRGRYVVYI

Sequences:

>Translated_258_residues
MSSLSLRNADQSMIPLYDINAVRGKSIINTAIITINVLVFVVLELPLLLQGNVLSFNELVKNYGMVPYFVVNGMREYTLL
THMWLHGSLEHIAGNMLFLYIFGDNVEAVLGRRGYLALYLLSGLGAVVFHLLSVMLTPSIILNPYLRQNPWLTPAIGASG
AISGVLAAYMLFFPHAQVMTLVFAPYPLLIPIRASVFIGLWFLYQLIMGTWSLSGMPTGVAWWAHIGGFLTGAALAYLLA
DRNRIIELRLRGRYVVYI
>Mature_257_residues
SSLSLRNADQSMIPLYDINAVRGKSIINTAIITINVLVFVVLELPLLLQGNVLSFNELVKNYGMVPYFVVNGMREYTLLT
HMWLHGSLEHIAGNMLFLYIFGDNVEAVLGRRGYLALYLLSGLGAVVFHLLSVMLTPSIILNPYLRQNPWLTPAIGASGA
ISGVLAAYMLFFPHAQVMTLVFAPYPLLIPIRASVFIGLWFLYQLIMGTWSLSGMPTGVAWWAHIGGFLTGAALAYLLAD
RNRIIELRLRGRYVVYI

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28709; Mature: 28578

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLSLRNADQSMIPLYDINAVRGKSIINTAIITINVLVFVVLELPLLLQGNVLSFNELV
CCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
KNYGMVPYFVVNGMREYTLLTHMWLHGSLEHIAGNMLFLYIFGDNVEAVLGRRGYLALYL
HHCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCHHHHHCCCCHHHHHH
LSGLGAVVFHLLSVMLTPSIILNPYLRQNPWLTPAIGASGAISGVLAAYMLFFPHAQVMT
HHHHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
LVFAPYPLLIPIRASVFIGLWFLYQLIMGTWSLSGMPTGVAWWAHIGGFLTGAALAYLLA
HHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DRNRIIELRLRGRYVVYI
CCCEEEEEEECCEEEEEC
>Mature Secondary Structure 
SSLSLRNADQSMIPLYDINAVRGKSIINTAIITINVLVFVVLELPLLLQGNVLSFNELV
CCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
KNYGMVPYFVVNGMREYTLLTHMWLHGSLEHIAGNMLFLYIFGDNVEAVLGRRGYLALYL
HHCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCHHHHHCCCCHHHHHH
LSGLGAVVFHLLSVMLTPSIILNPYLRQNPWLTPAIGASGAISGVLAAYMLFFPHAQVMT
HHHHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
LVFAPYPLLIPIRASVFIGLWFLYQLIMGTWSLSGMPTGVAWWAHIGGFLTGAALAYLLA
HHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DRNRIIELRLRGRYVVYI
CCCEEEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA