| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156936912
Identifier: 156936912
GI number: 156936912
Start: 106478
End: 107263
Strand: Reverse
Name: 156936912
Synonym: Igni_0117
Alternate gene names: NA
Gene position: 107263-106478 (Counterclockwise)
Preceding gene: 156936913
Following gene: 156936911
Centisome position: 8.27
GC content: 54.58
Gene sequence:
>786_bases ATGGACGTTAGCTTTATCTTATTGAACTCTGTCCTTTTTGCGACTACATCCTACGTAGGCAAGTACCTGAAGTACCTAAA AGCGTCATTCCTCGTGCCCGCTTCCTCGGACTTCGCCTTGGCCGCCACAATACTCTCCTTATACTTCCTAGGAAGGGCAG ACGCCACGTTCTTAATCTTTGCGACAATTCCGGTCGCAGCCGCCCTGTGGAAGAGTAGGGGGCGCCAGATCCTCTACTTG AAGGCGATAGCGTATACCGTCACTACCCTCATGATTCCGTACTTGAGTTACGAGGTGTATGAATACGCGCAGTCGCTCCT TACGGGGTTCTTGTTCGTAGACCCCAACATGTTATACCTAAGCGTTATAACGGTCACCTTGACATCTGTACTTGTGGCGT TTCGGAAGAACGTCATCTACTCTATATTCGACCCAGAGTTCGCTGCCCTTAAGAACATGAGGCCCGCGCTGTGGATAGGC CTCTTGGTAGTTACTTCAATAATCGACGGCTTTTCGCTGACCTTGAGTCTGGGGTTCTTGTTAGCGCACGTGGTAGCCCT CTCCGCCGTGGGAGTTAGGGAAACGCCCAAGGCCGCTGTCATATTTTTCGTTACGTCGCTAGCGCTCTCGAGCGTCGTCG CCGCTCCTTTAGCTTGCGCGGCCTCCGCTGTGGCGGTAAGGGCCGGTGAAGTGTTACTTCTGCGACTCCTCAGCGGTCGC GAGGTGCGAGGTCTGCGGGCGACCGGTCTGCGAAAGGCACTCCCCCGTCTGTCCCGCGTGCCTTAG
Upstream 100 bases:
>100_bases TTAAAGATATTCACTAAAGAGAACTTGTTGAAAACCTACGGGGTAGAGGTCCCGGTGCTCGTGCAAGGAAGACTCTGCAT ACCGCTGATAGGTGATCAAC
Downstream 100 bases:
>100_bases GGGGAGGTGCGAAGTCTGCGGGAAGAGGCTCTCCGTGTCCAGGTGTTACGTGTGCGGGCGGTTAGTCTGTAGAGAATGTA GCGAAGAGGTTCAGCCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MDVSFILLNSVLFATTSYVGKYLKYLKASFLVPASSDFALAATILSLYFLGRADATFLIFATIPVAAALWKSRGRQILYL KAIAYTVTTLMIPYLSYEVYEYAQSLLTGFLFVDPNMLYLSVITVTLTSVLVAFRKNVIYSIFDPEFAALKNMRPALWIG LLVVTSIIDGFSLTLSLGFLLAHVVALSAVGVRETPKAAVIFFVTSLALSSVVAAPLACAASAVAVRAGEVLLLRLLSGR EVRGLRATGLRKALPRLSRVP
Sequences:
>Translated_261_residues MDVSFILLNSVLFATTSYVGKYLKYLKASFLVPASSDFALAATILSLYFLGRADATFLIFATIPVAAALWKSRGRQILYL KAIAYTVTTLMIPYLSYEVYEYAQSLLTGFLFVDPNMLYLSVITVTLTSVLVAFRKNVIYSIFDPEFAALKNMRPALWIG LLVVTSIIDGFSLTLSLGFLLAHVVALSAVGVRETPKAAVIFFVTSLALSSVVAAPLACAASAVAVRAGEVLLLRLLSGR EVRGLRATGLRKALPRLSRVP >Mature_261_residues MDVSFILLNSVLFATTSYVGKYLKYLKASFLVPASSDFALAATILSLYFLGRADATFLIFATIPVAAALWKSRGRQILYL KAIAYTVTTLMIPYLSYEVYEYAQSLLTGFLFVDPNMLYLSVITVTLTSVLVAFRKNVIYSIFDPEFAALKNMRPALWIG LLVVTSIIDGFSLTLSLGFLLAHVVALSAVGVRETPKAAVIFFVTSLALSSVVAAPLACAASAVAVRAGEVLLLRLLSGR EVRGLRATGLRKALPRLSRVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28304; Mature: 28304
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVSFILLNSVLFATTSYVGKYLKYLKASFLVPASSDFALAATILSLYFLGRADATFLIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEH ATIPVAAALWKSRGRQILYLKAIAYTVTTLMIPYLSYEVYEYAQSLLTGFLFVDPNMLYL HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SVITVTLTSVLVAFRKNVIYSIFDPEFAALKNMRPALWIGLLVVTSIIDGFSLTLSLGFL HHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHH LAHVVALSAVGVRETPKAAVIFFVTSLALSSVVAAPLACAASAVAVRAGEVLLLRLLSGR HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EVRGLRATGLRKALPRLSRVP CCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDVSFILLNSVLFATTSYVGKYLKYLKASFLVPASSDFALAATILSLYFLGRADATFLIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEH ATIPVAAALWKSRGRQILYLKAIAYTVTTLMIPYLSYEVYEYAQSLLTGFLFVDPNMLYL HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SVITVTLTSVLVAFRKNVIYSIFDPEFAALKNMRPALWIGLLVVTSIIDGFSLTLSLGFL HHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHH LAHVVALSAVGVRETPKAAVIFFVTSLALSSVVAAPLACAASAVAVRAGEVLLLRLLSGR HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EVRGLRATGLRKALPRLSRVP CCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA