Definition | Cronobacter sakazakii ATCC BAA-894 plasmid pESA3, complete sequence. |
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Accession | NC_009780 |
Length | 131,196 |
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The map label for this gene is ymaE [H]
Identifier: 156936647
GI number: 156936647
Start: 91455
End: 92390
Strand: Direct
Name: ymaE [H]
Synonym: ESA_pESA3p05528
Alternate gene names: 156936647
Gene position: 91455-92390 (Clockwise)
Preceding gene: 156936642
Following gene: 156936649
Centisome position: 69.71
GC content: 58.97
Gene sequence:
>936_bases ATGACCTGGGAATGGTGTGGGAATTTGTTGCGGTGCTTTTTTAGGCTCGCCACGGCGCTTTGCTCTAAGGTTTATGTCAG TAAGCGAAAGCCTGTGCGCCGTTGCACTGGCGTCGCCACACCTCAGGAGGCCTTTGTGATCACACTGTGTAACGCCTGCG GCACGTCATATCAGGTTGACAATGCCCGGCCACAGCGCTGCAAAATTTGTGACGATGAGCGGCAGTTTGTTCCGGTAACG GGGCAGCAATGGGTGGACCATGATGCGCTGCTGGCGACCCATTCCAATAAATGGAAGCAGCATACCCCGGATCTTTTCAG CATCCGGACGGTGCCGGATTTTGCGATTGGCCAGCGTGCGTTTCTGCTGCGTACCCCGCAGGGAAATATTCTCTGGGACT GCGTCGCCACCCTGGATGACGCCACAAAAACCCTGATTGCCGCGCTGGGCGGTCTGATGGCCATTGCCATTTCGCATCCG CACTTTTACACCACCATGCAGGACTGGGCGGCCGCCTTTAACGCGCCGGTGTATCTGCATGCCAGCGACCGCGAATGGAT AATGCGCGACAGCCCGTTTATCCGCCTCTGGGAGGGAGATGAACTGACGCTGGCTGAGGATATCCGCGTGATTCGCCTCG GCGGCCATTTTGCCGGTGGCTGCGTACTGCATGACGCGCGCGGCGACGGCCTGCTGCTGAGCGGTGATATTTTGCAGGTG ACGCCGGGGGCGAAGAGCGTCTCATTTATGTGGAGTTATCCGAATATGCTGCCGCTACCGGCCGCCACCGTCAGCGCGAT GACAGACCGGCTGCGCGGCGTGTCATTTTCGACGCTATGGGGCGCGTTTGAAGGCCGTGAAATCACTGCCGACGCCAGCG AGCGGGTGCGCCGTTCGGGGGAAAAATATGTGGCGTGTCTGAATCGCGCGGATTAA
Upstream 100 bases:
>100_bases CGGCACAACGAATATCGGCAGCCAGGCATGCAATAATTAGCCTCCGGCAGACGCTTTCTCGTATGCCCATGATTAACAAA ACATTAAATTTTTTAAAGTA
Downstream 100 bases:
>100_bases CGCTTTTTATTTCGTGACGCTCAGGCCCGTTCATACGCGACCCGACCATCAACATAGGTGCGGTATATCGCGCGATCGTC ACCCAGCGTCATCATCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTWEWCGNLLRCFFRLATALCSKVYVSKRKPVRRCTGVATPQEAFVITLCNACGTSYQVDNARPQRCKICDDERQFVPVT GQQWVDHDALLATHSNKWKQHTPDLFSIRTVPDFAIGQRAFLLRTPQGNILWDCVATLDDATKTLIAALGGLMAIAISHP HFYTTMQDWAAAFNAPVYLHASDREWIMRDSPFIRLWEGDELTLAEDIRVIRLGGHFAGGCVLHDARGDGLLLSGDILQV TPGAKSVSFMWSYPNMLPLPAATVSAMTDRLRGVSFSTLWGAFEGREITADASERVRRSGEKYVACLNRAD
Sequences:
>Translated_311_residues MTWEWCGNLLRCFFRLATALCSKVYVSKRKPVRRCTGVATPQEAFVITLCNACGTSYQVDNARPQRCKICDDERQFVPVT GQQWVDHDALLATHSNKWKQHTPDLFSIRTVPDFAIGQRAFLLRTPQGNILWDCVATLDDATKTLIAALGGLMAIAISHP HFYTTMQDWAAAFNAPVYLHASDREWIMRDSPFIRLWEGDELTLAEDIRVIRLGGHFAGGCVLHDARGDGLLLSGDILQV TPGAKSVSFMWSYPNMLPLPAATVSAMTDRLRGVSFSTLWGAFEGREITADASERVRRSGEKYVACLNRAD >Mature_310_residues TWEWCGNLLRCFFRLATALCSKVYVSKRKPVRRCTGVATPQEAFVITLCNACGTSYQVDNARPQRCKICDDERQFVPVTG QQWVDHDALLATHSNKWKQHTPDLFSIRTVPDFAIGQRAFLLRTPQGNILWDCVATLDDATKTLIAALGGLMAIAISHPH FYTTMQDWAAAFNAPVYLHASDREWIMRDSPFIRLWEGDELTLAEDIRVIRLGGHFAGGCVLHDARGDGLLLSGDILQVT PGAKSVSFMWSYPNMLPLPAATVSAMTDRLRGVSFSTLWGAFEGREITADASERVRRSGEKYVACLNRAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34701; Mature: 34570
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWEWCGNLLRCFFRLATALCSKVYVSKRKPVRRCTGVATPQEAFVITLCNACGTSYQVD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHEEEEEECCCCCCEEEC NARPQRCKICDDERQFVPVTGQQWVDHDALLATHSNKWKQHTPDLFSIRTVPDFAIGQRA CCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCEE FLLRTPQGNILWDCVATLDDATKTLIAALGGLMAIAISHPHFYTTMQDWAAAFNAPVYLH EEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCEEEE ASDREWIMRDSPFIRLWEGDELTLAEDIRVIRLGGHFAGGCVLHDARGDGLLLSGDILQV ECCCCEEECCCCEEEEECCCCEEEHHCEEEEEECCCCCCCEEEEECCCCCEEEECCEEEE TPGAKSVSFMWSYPNMLPLPAATVSAMTDRLRGVSFSTLWGAFEGREITADASERVRRSG CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCEECCCHHHHHHHCC EKYVACLNRAD CCEEEEECCCC >Mature Secondary Structure TWEWCGNLLRCFFRLATALCSKVYVSKRKPVRRCTGVATPQEAFVITLCNACGTSYQVD CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHEEEEEECCCCCCEEEC NARPQRCKICDDERQFVPVTGQQWVDHDALLATHSNKWKQHTPDLFSIRTVPDFAIGQRA CCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCEE FLLRTPQGNILWDCVATLDDATKTLIAALGGLMAIAISHPHFYTTMQDWAAAFNAPVYLH EEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCEEEE ASDREWIMRDSPFIRLWEGDELTLAEDIRVIRLGGHFAGGCVLHDARGDGLLLSGDILQV ECCCCEEECCCCEEEEECCCCEEEHHCEEEEEECCCCCCCEEEEECCCCCEEEECCEEEE TPGAKSVSFMWSYPNMLPLPAATVSAMTDRLRGVSFSTLWGAFEGREITADASERVRRSG CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCEECCCHHHHHHHCC EKYVACLNRAD CCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]