Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is ymfH [H]
Identifier: 15675931
GI number: 15675931
Start: 1829659
End: 1830948
Strand: Reverse
Name: ymfH [H]
Synonym: SPy_2198
Alternate gene names: 15675931
Gene position: 1830948-1829659 (Counterclockwise)
Preceding gene: 15675932
Following gene: 15675930
Centisome position: 98.84
GC content: 31.94
Gene sequence:
>1290_bases ATGACAAAATTAGTAAAGATAAACTATCCTAATATTGACGAAGACCTTTACTATGTAAAATTAGAAAATGGTTTAACTGT TTATTTTATAAAAAAAATAGGGTTTTTAGAAAAAACAGCTATGTTGACAGTAGGTTTCGGTTCTCTTGACAATAAGTTGA CAGTCGATGACGAATCACGAGATGCTCCAGCAGGTATTGCACACTTTTTAGAACATAAACTCTTTGAAGATGAATCAGGT GGAGATATTTCATTAAAGTTTACACAGCTAGGAGCAGAGACAAATGCCTTTACAACTTTCAACCAAACGAGTTTCTTCTT TTCAACAGCTAGTAAATTTCAGGAAAATTTGGAACTCCTTCAATATTTTGTTCTTTCTGCTAATATAACAGATGAATCTG TTAGTAGAGAAAAAAAAATAATCGGGCAAGAAATTGATATGTATCAAGATGATGCTGACTACCGTGCATATAGTGGAATC CTTCAGAACTTATTTCCAAAAACAAGTTTAGCTAATGATATTGCTGGCTCAAAAGCATCCATTCAAAAGATCACGAAAAT ATTATTGGAAACGCATCATACTTATTTTTACCAACCTACTAATATGAGTCTATTCATTGTCGGTGATATTGATATTGACG AAACTTTTTTAGCTATTCAAAGGTTTCAAACCACATTATCCTATCCAGATAGAAAAAGGGTAACTGTTGATCCTTTACAC TATTATCCTGTCATTAAATCATCTTCTGTTGACATGGATGTTACTACTGCCAAGCTGGTTGTTGGTTTTCGAGGGTATCT GACCTTAACTCAGCATTCACTATTAACGTATCGTATTGCCTTGAAGCTATTTTTATCAATGCTTATAGGTTGGACTTCTA AAATCTATCATACGCTATATGAAGATGGTAAAATAGACGATTCATTTGATGTGGATGTTGAAATTCATCATAATTTTCAA TTTGTATTAATATCACTTGATACACCAGAGCCTATCGCAATGTCTAACTATATCCGTCAAAAATTAGCTACTATAAAGAT ATCAAAAGAGTTTACAAATGAGCACTTAAATCTATTAAAAAAAGAAATGTATGGTGACTTTATTCAGAGTTTAGACTCTA TAGAACATTTAACCCATCAGTTCAGTCTATACCTGTCTGATTCTGATAAAGAAACATATTTTGATATTCCAAAAATTATA GAAAGACTCACTCTAAAAGATGTTGTTACAATTGGAAAAGCATTTTTTGAAAAAGCTGATGCTTCAGACTTCACAGTCTT CCCAAAATAG
Upstream 100 bases:
>100_bases AATTGGATTAAAGGGGTTAATGAAGTTAATAAAGCAGATATCATTAAAGTAGCTAATCTTTTAAAGCTTCAAACTGTCTA TTTTTTAGAAGGAATATAAA
Downstream 100 bases:
>100_bases ATGAAAATCTGTTATAATAGGGTTACTATATTATTTTTGAGGTACCTGTATGAGTGAAAAAAGTCTTGGTGAAGTGTTAA GAGAATCGCGTGTTGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MTKLVKINYPNIDEDLYYVKLENGLTVYFIKKIGFLEKTAMLTVGFGSLDNKLTVDDESRDAPAGIAHFLEHKLFEDESG GDISLKFTQLGAETNAFTTFNQTSFFFSTASKFQENLELLQYFVLSANITDESVSREKKIIGQEIDMYQDDADYRAYSGI LQNLFPKTSLANDIAGSKASIQKITKILLETHHTYFYQPTNMSLFIVGDIDIDETFLAIQRFQTTLSYPDRKRVTVDPLH YYPVIKSSSVDMDVTTAKLVVGFRGYLTLTQHSLLTYRIALKLFLSMLIGWTSKIYHTLYEDGKIDDSFDVDVEIHHNFQ FVLISLDTPEPIAMSNYIRQKLATIKISKEFTNEHLNLLKKEMYGDFIQSLDSIEHLTHQFSLYLSDSDKETYFDIPKII ERLTLKDVVTIGKAFFEKADASDFTVFPK
Sequences:
>Translated_429_residues MTKLVKINYPNIDEDLYYVKLENGLTVYFIKKIGFLEKTAMLTVGFGSLDNKLTVDDESRDAPAGIAHFLEHKLFEDESG GDISLKFTQLGAETNAFTTFNQTSFFFSTASKFQENLELLQYFVLSANITDESVSREKKIIGQEIDMYQDDADYRAYSGI LQNLFPKTSLANDIAGSKASIQKITKILLETHHTYFYQPTNMSLFIVGDIDIDETFLAIQRFQTTLSYPDRKRVTVDPLH YYPVIKSSSVDMDVTTAKLVVGFRGYLTLTQHSLLTYRIALKLFLSMLIGWTSKIYHTLYEDGKIDDSFDVDVEIHHNFQ FVLISLDTPEPIAMSNYIRQKLATIKISKEFTNEHLNLLKKEMYGDFIQSLDSIEHLTHQFSLYLSDSDKETYFDIPKII ERLTLKDVVTIGKAFFEKADASDFTVFPK >Mature_428_residues TKLVKINYPNIDEDLYYVKLENGLTVYFIKKIGFLEKTAMLTVGFGSLDNKLTVDDESRDAPAGIAHFLEHKLFEDESGG DISLKFTQLGAETNAFTTFNQTSFFFSTASKFQENLELLQYFVLSANITDESVSREKKIIGQEIDMYQDDADYRAYSGIL QNLFPKTSLANDIAGSKASIQKITKILLETHHTYFYQPTNMSLFIVGDIDIDETFLAIQRFQTTLSYPDRKRVTVDPLHY YPVIKSSSVDMDVTTAKLVVGFRGYLTLTQHSLLTYRIALKLFLSMLIGWTSKIYHTLYEDGKIDDSFDVDVEIHHNFQF VLISLDTPEPIAMSNYIRQKLATIKISKEFTNEHLNLLKKEMYGDFIQSLDSIEHLTHQFSLYLSDSDKETYFDIPKIIE RLTLKDVVTIGKAFFEKADASDFTVFPK
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Escherichia coli, GI1787770, Length=234, Percent_Identity=25.2136752136752, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 49187; Mature: 49055
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLVKINYPNIDEDLYYVKLENGLTVYFIKKIGFLEKTAMLTVGFGSLDNKLTVDDESR CCEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCHHHEEEEEEECCCCCCEEEECCCCC DAPAGIAHFLEHKLFEDESGGDISLKFTQLGAETNAFTTFNQTSFFFSTASKFQENLELL CCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHH QYFVLSANITDESVSREKKIIGQEIDMYQDDADYRAYSGILQNLFPKTSLANDIAGSKAS HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHH IQKITKILLETHHTYFYQPTNMSLFIVGDIDIDETFLAIQRFQTTLSYPDRKRVTVDPLH HHHHHHHHHHHCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCEE YYPVIKSSSVDMDVTTAKLVVGFRGYLTLTQHSLLTYRIALKLFLSMLIGWTSKIYHTLY EEEEEECCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDGKIDDSFDVDVEIHHNFQFVLISLDTPEPIAMSNYIRQKLATIKISKEFTNEHLNLLK CCCCCCCCEEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHH KEMYGDFIQSLDSIEHLTHQFSLYLSDSDKETYFDIPKIIERLTLKDVVTIGKAFFEKAD HHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCC ASDFTVFPK CCCEEECCC >Mature Secondary Structure TKLVKINYPNIDEDLYYVKLENGLTVYFIKKIGFLEKTAMLTVGFGSLDNKLTVDDESR CEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCHHHEEEEEEECCCCCCEEEECCCCC DAPAGIAHFLEHKLFEDESGGDISLKFTQLGAETNAFTTFNQTSFFFSTASKFQENLELL CCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHH QYFVLSANITDESVSREKKIIGQEIDMYQDDADYRAYSGILQNLFPKTSLANDIAGSKAS HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHH IQKITKILLETHHTYFYQPTNMSLFIVGDIDIDETFLAIQRFQTTLSYPDRKRVTVDPLH HHHHHHHHHHHCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCEE YYPVIKSSSVDMDVTTAKLVVGFRGYLTLTQHSLLTYRIALKLFLSMLIGWTSKIYHTLY EEEEEECCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDGKIDDSFDVDVEIHHNFQFVLISLDTPEPIAMSNYIRQKLATIKISKEFTNEHLNLLK CCCCCCCCEEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHH KEMYGDFIQSLDSIEHLTHQFSLYLSDSDKETYFDIPKIIERLTLKDVVTIGKAFFEKAD HHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCC ASDFTVFPK CCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]