Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is gidA
Identifier: 15675920
GI number: 15675920
Start: 1818087
End: 1819985
Strand: Reverse
Name: gidA
Synonym: SPy_2185
Alternate gene names: 15675920
Gene position: 1819985-1818087 (Counterclockwise)
Preceding gene: 15675921
Following gene: 15675919
Centisome position: 98.25
GC content: 39.81
Gene sequence:
>1899_bases ATGACACATGAATTTACAGAAAGCTATGACGTCATTGTCATAGGTGCAGGTCATGCTGGTGTTGAAGCCAGTTTGGCCAC TAGTCGTATGGGTTGTAAAACTTTATTGGCAACAATCAACCTTGATATGTTGGCTTTTATGCCGTGTAATCCTTCTATTG GAGGATCTGCCAAAGGGATAGTGGTTAGAGAGATTGATGCTCTTGGCGGCGAAATGGGTAAAAATATTGATAAAACTTAT ATCCAGATGAAAATGCTTAATACAGGTAAGGGACCAGCTGTACGCGCTCTCCGAGCTCAAGCAGATAAATCCCTGTATGC GCGTGAAATGAAACATACGGTTGAAAAACAGGCTAATTTGACTCTTCGCCAAACGATGATTGATGATATTCTAGTTGAAG ATGGACGAGTTGTAGGTGTTTTAACAGCCACAGGACAAAAATTTGCAGCTAAGGCAGTTGTAGTGACAACAGGAACAGCT CTGCGTGGCGAAATTATTTTAGGAGAACTCAAATATTCTTCTGGGCCTAATAATAGTTTGGCATCAGTAACCTTAGCAGA TAATTTAAAAAAACTCGGCTTAGAAATTGGCAGATTCAAAACAGGAACGCCTCCTCGTGTCAAAGCATCTTCTATTAATT ACGATCAAACGGAAATTCAGCCAGGTGATGACAAACCTAATCATTTTTCATTTATGTCAAAAGATGCTGATTATCTCAAA GATCAAATTCCCTGCTGGTTGACTTATACGAATCAAACTAGTCATGATATCATTAATCAGAACCTTTACAGAGCACCGAT GTTTTCTGGCATTGTTAAAGGTGTAGGCCCTCGTTACTGCCCATCTATTGAAGATAAGATTGTTCGCTTTGCTGATAAAG AACGTCATCAACTTTTCTTAGAGCCAGAGGGGCGTGATACAGAAGAAGTGTATGTTCAAGGGTTGTCAACGAGTCTTCCA GAAGATGTCCAAAAAGATTTGATTCATTCGATCAAAGGACTTGAAAAGGCTGAAATGATGCGCACTGGTTATGCTATTGA ATATGATATTGTTTTACCTCACCAGCTACGTGCCACACTTGAAACCAAGCTAATTTCAGGACTCTTTACGGCTGGGCAAA CTAATGGAACTTCTGGGTATGAAGAGGCTGCTGGCCAAGGACTTATTGCTGGAATCAATGCTGCTTTGAAAGTTCAAGGT AAGCCAGAACTTATTTTGAAACGGAGCGATGCCTATATTGGCGTTATGATTGACGATTTGGTTACCAAAGGAACCTTGGA ACCTTATCGATTGTTGACATCGCGAGCTGAGTATCGTTTGATTTTACGTCATGACAACGCTGATATGCGTTTGACAGAGA TTGGTCGCGACATTGGGTTGGTTGATGATGAGCGTTGGAAGGCCTTCGAAATTAAGAAAAACCAATTTGATAACGAATTA AAACGTCTGAACAGTATCAAATTAAAACCGATTAAAGAAACCAATGACCGCGTTCAAGATCTAGGCTTCAAACCGTTAAC CGATGCGATGACTGCTAAAGAATTCATGCGTCGTCCAGAAATTGATTATGCGACTGCAGTCTCTTTTGTTGGTCCTGCGG CTGAAGATTTAGATGCTAAAATCATTGAACTTTTAGAAACAGAAATCAAGTACGAAGGCTATATTCGCAAAGCTTTAGAT CAGGTTGCTAAGATGAAACGCATGGAAGAAAAACGTATTCCTACAAATATTGATTGGGATGCTATTGATTCTATTGCAAC TGAGGCGCGTCAGAAATTTAAGAAAATTAATCCTGAAACAATTGGACAAGCTAGTCGTATTTCAGGAGTCAATCCTGCGG ACATCAGTATCTTGATGATTTATTTAGAAGGAAACGGAAAAGCTCATCGAAAATATTAA
Upstream 100 bases:
>100_bases ACCGAGTTGGCTAAATGGCCAGGACATATTGTCCGTATTGAAGGCTAAACTAAAGCGTATGATTTTAAATGAATAGACTG AAATAAAGGATTTTAAAAAA
Downstream 100 bases:
>100_bases ATGGAAATGAAATTGTAATCTCAAAGCAAGTGGAAGCTCTGTATTTCAGGGCTTTTTTATGGTATAATGTGTGCTTAAGA GGTTATAAAGATGAAAAAAT
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 632; Mature: 631
Protein sequence:
>632_residues MTHEFTESYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDALGGEMGKNIDKTY IQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANLTLRQTMIDDILVEDGRVVGVLTATGQKFAAKAVVVTTGTA LRGEIILGELKYSSGPNNSLASVTLADNLKKLGLEIGRFKTGTPPRVKASSINYDQTEIQPGDDKPNHFSFMSKDADYLK DQIPCWLTYTNQTSHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDTEEVYVQGLSTSLP EDVQKDLIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISGLFTAGQTNGTSGYEEAAGQGLIAGINAALKVQG KPELILKRSDAYIGVMIDDLVTKGTLEPYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDERWKAFEIKKNQFDNEL KRLNSIKLKPIKETNDRVQDLGFKPLTDAMTAKEFMRRPEIDYATAVSFVGPAAEDLDAKIIELLETEIKYEGYIRKALD QVAKMKRMEEKRIPTNIDWDAIDSIATEARQKFKKINPETIGQASRISGVNPADISILMIYLEGNGKAHRKY
Sequences:
>Translated_632_residues MTHEFTESYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDALGGEMGKNIDKTY IQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANLTLRQTMIDDILVEDGRVVGVLTATGQKFAAKAVVVTTGTA LRGEIILGELKYSSGPNNSLASVTLADNLKKLGLEIGRFKTGTPPRVKASSINYDQTEIQPGDDKPNHFSFMSKDADYLK DQIPCWLTYTNQTSHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDTEEVYVQGLSTSLP EDVQKDLIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISGLFTAGQTNGTSGYEEAAGQGLIAGINAALKVQG KPELILKRSDAYIGVMIDDLVTKGTLEPYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDERWKAFEIKKNQFDNEL KRLNSIKLKPIKETNDRVQDLGFKPLTDAMTAKEFMRRPEIDYATAVSFVGPAAEDLDAKIIELLETEIKYEGYIRKALD QVAKMKRMEEKRIPTNIDWDAIDSIATEARQKFKKINPETIGQASRISGVNPADISILMIYLEGNGKAHRKY >Mature_631_residues THEFTESYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGIVVREIDALGGEMGKNIDKTYI QMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANLTLRQTMIDDILVEDGRVVGVLTATGQKFAAKAVVVTTGTAL RGEIILGELKYSSGPNNSLASVTLADNLKKLGLEIGRFKTGTPPRVKASSINYDQTEIQPGDDKPNHFSFMSKDADYLKD QIPCWLTYTNQTSHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFLEPEGRDTEEVYVQGLSTSLPE DVQKDLIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATLETKLISGLFTAGQTNGTSGYEEAAGQGLIAGINAALKVQGK PELILKRSDAYIGVMIDDLVTKGTLEPYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDERWKAFEIKKNQFDNELK RLNSIKLKPIKETNDRVQDLGFKPLTDAMTAKEFMRRPEIDYATAVSFVGPAAEDLDAKIIELLETEIKYEGYIRKALDQ VAKMKRMEEKRIPTNIDWDAIDSIATEARQKFKKINPETIGQASRISGVNPADISILMIYLEGNGKAHRKY
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=633, Percent_Identity=39.9684044233807, Blast_Score=436, Evalue=1e-122, Organism=Homo sapiens, GI19882217, Length=658, Percent_Identity=38.4498480243161, Blast_Score=422, Evalue=1e-118, Organism=Homo sapiens, GI183227703, Length=673, Percent_Identity=37.592867756315, Blast_Score=416, Evalue=1e-116, Organism=Escherichia coli, GI2367273, Length=626, Percent_Identity=49.2012779552716, Blast_Score=620, Evalue=1e-178, Organism=Caenorhabditis elegans, GI17534255, Length=623, Percent_Identity=38.6837881219904, Blast_Score=442, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6321202, Length=622, Percent_Identity=40.032154340836, Blast_Score=444, Evalue=1e-125, Organism=Drosophila melanogaster, GI24658174, Length=632, Percent_Identity=41.9303797468354, Blast_Score=450, Evalue=1e-126,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_STRP1 (Q99XI8)
Other databases:
- EMBL: AE004092 - EMBL: CP000017 - RefSeq: NP_270094.1 - RefSeq: YP_283201.1 - ProteinModelPortal: Q99XI8 - SMR: Q99XI8 - EnsemblBacteria: EBSTRT00000000305 - EnsemblBacteria: EBSTRT00000028172 - GeneID: 3571047 - GeneID: 901831 - GenomeReviews: AE004092_GR - GenomeReviews: CP000017_GR - KEGG: spy:SPy_2185 - KEGG: spz:M5005_Spy_1838 - GeneTree: EBGT00050000026916 - HOGENOM: HBG284774 - OMA: GIQFRVL - ProtClustDB: PRK05192 - BioCyc: SPYO160490:SPY2185-MONOMER - BioCyc: SPYO293653:M5005_SPY1838-MONOMER - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 70216; Mature: 70084
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: BINDING 127-127 BINDING 182-182 BINDING 373-373
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHEFTESYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGI CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCE VVREIDALGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANL EEEEHHHHCHHHCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TLRQTMIDDILVEDGRVVGVLTATGQKFAAKAVVVTTGTALRGEIILGELKYSSGPNNSL HHHHHHHHHHHHCCCCEEEEEEECCCCHHCEEEEEECCCEEECEEEEEEEECCCCCCCCE ASVTLADNLKKLGLEIGRFKTGTPPRVKASSINYDQTEIQPGDDKPNHFSFMSKDADYLK EEEEHHHHHHHHCHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCHHHHH DQIPCWLTYTNQTSHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFL HCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEE EPEGRDTEEVYVQGLSTSLPEDVQKDLIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATL CCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEECHHHHHHHH ETKLISGLFTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKPELILKRSDAYIGVMIDDL HHHHHHHHHHCCCCCCCCCHHHHCCCCEEEECCEEEEECCCCCEEEEECCCEEEEEHHHH VTKGTLEPYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDERWKAFEIKKNQFDNEL HHCCCCCHHHHHHCCCCEEEEEEECCCCEEHHHHCCCCCCCCCCCCEEEEEHHHHHHHHH KRLNSIKLKPIKETNDRVQDLGFKPLTDAMTAKEFMRRPEIDYATAVSFVGPAAEDLDAK HHHHCCEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHH IIELLETEIKYEGYIRKALDQVAKMKRMEEKRIPTNIDWDAIDSIATEARQKFKKINPET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHH IGQASRISGVNPADISILMIYLEGNGKAHRKY CCCHHHCCCCCCCCEEEEEEEEECCCCCCCCC >Mature Secondary Structure THEFTESYDVIVIGAGHAGVEASLATSRMGCKTLLATINLDMLAFMPCNPSIGGSAKGI CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCE VVREIDALGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKSLYAREMKHTVEKQANL EEEEHHHHCHHHCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TLRQTMIDDILVEDGRVVGVLTATGQKFAAKAVVVTTGTALRGEIILGELKYSSGPNNSL HHHHHHHHHHHHCCCCEEEEEEECCCCHHCEEEEEECCCEEECEEEEEEEECCCCCCCCE ASVTLADNLKKLGLEIGRFKTGTPPRVKASSINYDQTEIQPGDDKPNHFSFMSKDADYLK EEEEHHHHHHHHCHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCHHHHH DQIPCWLTYTNQTSHDIINQNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFL HCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEE EPEGRDTEEVYVQGLSTSLPEDVQKDLIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATL CCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEECHHHHHHHH ETKLISGLFTAGQTNGTSGYEEAAGQGLIAGINAALKVQGKPELILKRSDAYIGVMIDDL HHHHHHHHHHCCCCCCCCCHHHHCCCCEEEECCEEEEECCCCCEEEEECCCEEEEEHHHH VTKGTLEPYRLLTSRAEYRLILRHDNADMRLTEIGRDIGLVDDERWKAFEIKKNQFDNEL HHCCCCCHHHHHHCCCCEEEEEEECCCCEEHHHHCCCCCCCCCCCCEEEEEHHHHHHHHH KRLNSIKLKPIKETNDRVQDLGFKPLTDAMTAKEFMRRPEIDYATAVSFVGPAAEDLDAK HHHHCCEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHH IIELLETEIKYEGYIRKALDQVAKMKRMEEKRIPTNIDWDAIDSIATEARQKFKKINPET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHH IGQASRISGVNPADISILMIYLEGNGKAHRKY CCCHHHCCCCCCCCEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11296296