Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is ybfL [H]
Identifier: 15675915
GI number: 15675915
Start: 1812120
End: 1813253
Strand: Reverse
Name: ybfL [H]
Synonym: SPy_2180
Alternate gene names: 15675915
Gene position: 1813253-1812120 (Counterclockwise)
Preceding gene: 15675916
Following gene: 15675914
Centisome position: 97.88
GC content: 38.18
Gene sequence:
>1134_bases ATGATTGATTTTATTATTTCTATTGATGATTGCGCAGTTGAATTGGATAGTCGTCAATCTTGGAAAATTCGCTACCCCTT ATCAACCATTCTATTTCTTGTCTTCGTTTGTCAGTTAGCTGGCATTGAAACCTGGAAGGAGATGGAAGATTTTATTGAAA TGAATGAACCATTGTTTGCGACCTACGTTGATTTGAGTGAAGGTTGTCCGTCTCATGATACCTTAGAGCGTGTGATTAGT CTTGTTAATTCAGACCGTTTAAAAGAGCTTAAAGTTCAATTTGAGCAATCATTGACAAGCTTAGATGCCGTTCATCAACT GATTTCAGTGGACGGTAAAACGATTCGAGGCAATCGAGGTAAAAATCAGAAGCCTGTTCATATTGTAACGGCTTATGATG GGGGTCATCATCTTAGTTTGGGACAGGTAGCGGTTGAGGAGAAAAGTAATGAAATTGTTGCCATCCCTCAGCTATTGCGG ACAATTGATATCCGTAAAAGCATTGTAACGATAGACGCAATGGGCACGCAGACGGCTATCGTTGATACGATTATAAAAGG TAAAGCAGACTATTGCTTAGCCGTCAAAGGAAATCAAGAAACACTTTATGATGATATTGCTCTTTATTTTAGTGATGCCA CCTTATTGGAAGAACTCCAAGAAAATACGCAGTATTATCAGACTGTTGAAAAATCTAGGGGACAGATTGAAGTTAGAGAA TACTGGGTGTCTTCCGATATCAAATGGTTGTGTCAAAATTATCCCAAATGGCATAAGTTACGTGGTATTGGGATGACTCG TAACACGATTGATAAGGATGGTCAGCTGAGTCAAGAGAATCGTTATTTTATCTTTAGCTTTAAGCCGGATGTCCTCACAT TTGCCAATTGTGTACGAGGTCATTGGCAGATAGAGAGTATGCACTGGTTATTGGACGTTGTTTATCATGAAGATCATCAT CAGACATTGGATAAAAGAGCCGCATTTAACCTAAATCTTATCCGAAAAATGTGCTTATATTTTCTCAAAGTGATGGTATT TCCTAAAAAAGACCTCAGTTATCGTCGCAAACAACGGTATATTTCTGTCCATTTGGAAGATTATTTAGTCCAATTATTTG GAGAAAGAGGCTAA
Upstream 100 bases:
>100_bases ATAGACACGCCAAACGCATGAAGAAACTTTTGTTTTCAGAAAACTAGATTCATAATGACAAAATCAATCAAAGTAGTACA CTATAGATGAGGTGACTACG
Downstream 100 bases:
>100_bases GCAGATGATTGATTTAAAAAGGAATCTTTTCAAAATTGATGTCCGGGCACAAAAGGATGAAGAGAAAGTTTTCATGCGTA CGGCGTGAGATGATAGATAG
Product: putative transposase
Products: NA
Alternate protein names: H repeat-associated protein in rhsC-phrB intergenic region; ORF-H2 [H]
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMEDFIEMNEPLFATYVDLSEGCPSHDTLERVIS LVNSDRLKELKVQFEQSLTSLDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEEKSNEIVAIPQLLR TIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQETLYDDIALYFSDATLLEELQENTQYYQTVEKSRGQIEVRE YWVSSDIKWLCQNYPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRGHWQIESMHWLLDVVYHEDHH QTLDKRAAFNLNLIRKMCLYFLKVMVFPKKDLSYRRKQRYISVHLEDYLVQLFGERG
Sequences:
>Translated_377_residues MIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMEDFIEMNEPLFATYVDLSEGCPSHDTLERVIS LVNSDRLKELKVQFEQSLTSLDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEEKSNEIVAIPQLLR TIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQETLYDDIALYFSDATLLEELQENTQYYQTVEKSRGQIEVRE YWVSSDIKWLCQNYPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRGHWQIESMHWLLDVVYHEDHH QTLDKRAAFNLNLIRKMCLYFLKVMVFPKKDLSYRRKQRYISVHLEDYLVQLFGERG >Mature_377_residues MIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMEDFIEMNEPLFATYVDLSEGCPSHDTLERVIS LVNSDRLKELKVQFEQSLTSLDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEEKSNEIVAIPQLLR TIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQETLYDDIALYFSDATLLEELQENTQYYQTVEKSRGQIEVRE YWVSSDIKWLCQNYPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRGHWQIESMHWLLDVVYHEDHH QTLDKRAAFNLNLIRKMCLYFLKVMVFPKKDLSYRRKQRYISVHLEDYLVQLFGERG
Specific function: Unknown
COG id: COG5433
COG function: function code L; Transposase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1787733, Length=370, Percent_Identity=33.7837837837838, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI1789896, Length=371, Percent_Identity=33.4231805929919, Blast_Score=181, Evalue=8e-47, Organism=Escherichia coli, GI1786924, Length=231, Percent_Identity=36.3636363636364, Blast_Score=142, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 43817; Mature: 43817
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMEDFIEMNEPLFA CEEEEEECCHHEEEECCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEE TYVDLSEGCPSHDTLERVISLVNSDRLKELKVQFEQSLTSLDAVHQLISVDGKTIRGNRG EEEEHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC KNQKPVHIVTAYDGGHHLSLGQVAVEEKSNEIVAIPQLLRTIDIRKSIVTIDAMGTQTAI CCCCCEEEEEEECCCCEEEHHHEEEECCCCCEEEHHHHHHHHHHHHHEEEEECCCCHHHH VDTIIKGKADYCLAVKGNQETLYDDIALYFSDATLLEELQENTQYYQTVEKSRGQIEVRE HHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEH YWVSSDIKWLCQNYPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRG HHHCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCC HWQIESMHWLLDVVYHEDHHQTLDKRAAFNLNLIRKMCLYFLKVMVFPKKDLSYRRKQRY CEEEHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ISVHLEDYLVQLFGERG EEEHHHHHHHHHHCCCC >Mature Secondary Structure MIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMEDFIEMNEPLFA CEEEEEECCHHEEEECCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEE TYVDLSEGCPSHDTLERVISLVNSDRLKELKVQFEQSLTSLDAVHQLISVDGKTIRGNRG EEEEHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC KNQKPVHIVTAYDGGHHLSLGQVAVEEKSNEIVAIPQLLRTIDIRKSIVTIDAMGTQTAI CCCCCEEEEEEECCCCEEEHHHEEEECCCCCEEEHHHHHHHHHHHHHEEEEECCCCHHHH VDTIIKGKADYCLAVKGNQETLYDDIALYFSDATLLEELQENTQYYQTVEKSRGQIEVRE HHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEH YWVSSDIKWLCQNYPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRG HHHCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCC HWQIESMHWLLDVVYHEDHHQTLDKRAAFNLNLIRKMCLYFLKVMVFPKKDLSYRRKQRY CEEEHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ISVHLEDYLVQLFGERG EEEHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8387990; 8905232; 9278503 [H]