Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
---|---|
Accession | NC_002737 |
Length | 1,852,441 |
Click here to switch to the map view.
The map label for this gene is ruvA
Identifier: 15675869
GI number: 15675869
Start: 1769552
End: 1770148
Strand: Reverse
Name: ruvA
Synonym: SPy_2119
Alternate gene names: 15675869
Gene position: 1770148-1769552 (Counterclockwise)
Preceding gene: 15675870
Following gene: 15675868
Centisome position: 95.56
GC content: 39.87
Gene sequence:
>597_bases ATGTACGATTATATTAAAGGTCAATTGACCAAAATTACGGCAAAATACATTGTCGTTGAAGCTAATGGATTGGGCTACAT GATTAATGTTGCCAATCCTTATAGCTTTACAGATAGTGTCAACCAATTGGTAACCATTTATCTGCATCAAGTGATTCGTG AGGATGCTCACCTGTTGTTTGGGTTTCACACGGAAGATGAAAAAGATGTTTTTCTGAAATTAATTTCTGTATCAGGTATT GGTCCGACAACAGCTCTTGCTATTGTGGCAGTTGATGATAATGAGGGACTTGTGAATGCCATTGATAACAGTGACATTAA GTACCTAATGAAATTTCCTAAAATTGGTAAAAAAACAGCGCAGCAAATGGTTCTTGACTTAGCTGGCAAATTTGTGGAGG CTCCACAAGAGACTGGTCATACCAAAGCGCGCAGCAATAAAGCAGGCAATACTCAACTGGACGAAGCGATTGAAGCCCTC CTTGCTCTCGGTTATAAAGCAAAAGAGCTGAAAAAAATTCGTGCCTTCTTTGAGGGGACCTCTGAGACGGCAGAGCAATA CATCAAATCAGCATTGAAACTGTTAATGAAAGGGTAG
Upstream 100 bases:
>100_bases CATTTTACAGGTCCTTTAGGCGTGCAATGCTTATTTGCAGTCATTGCTTTGCTAGGGATTTATTTTACGGTTGTTTCTGC AAAAATGAAAAAGGTGTAAT
Downstream 100 bases:
>100_bases GTGTTTCACATGAAACGTTGCTCATGGGTTCCTAAGGATAACCAGCTTTACTGTGATTACCACGATTTAGAATGGGGTCA ACCCCTGGATGATGATAGAG
Product: Holliday junction DNA helicase RuvA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MYDYIKGQLTKITAKYIVVEANGLGYMINVANPYSFTDSVNQLVTIYLHQVIREDAHLLFGFHTEDEKDVFLKLISVSGI GPTTALAIVAVDDNEGLVNAIDNSDIKYLMKFPKIGKKTAQQMVLDLAGKFVEAPQETGHTKARSNKAGNTQLDEAIEAL LALGYKAKELKKIRAFFEGTSETAEQYIKSALKLLMKG
Sequences:
>Translated_198_residues MYDYIKGQLTKITAKYIVVEANGLGYMINVANPYSFTDSVNQLVTIYLHQVIREDAHLLFGFHTEDEKDVFLKLISVSGI GPTTALAIVAVDDNEGLVNAIDNSDIKYLMKFPKIGKKTAQQMVLDLAGKFVEAPQETGHTKARSNKAGNTQLDEAIEAL LALGYKAKELKKIRAFFEGTSETAEQYIKSALKLLMKG >Mature_198_residues MYDYIKGQLTKITAKYIVVEANGLGYMINVANPYSFTDSVNQLVTIYLHQVIREDAHLLFGFHTEDEKDVFLKLISVSGI GPTTALAIVAVDDNEGLVNAIDNSDIKYLMKFPKIGKKTAQQMVLDLAGKFVEAPQETGHTKARSNKAGNTQLDEAIEAL LALGYKAKELKKIRAFFEGTSETAEQYIKSALKLLMKG
Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday
COG id: COG0632
COG function: function code L; Holliday junction resolvasome, DNA-binding subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ruvA family
Homologues:
Organism=Escherichia coli, GI1788168, Length=201, Percent_Identity=28.8557213930348, Blast_Score=103, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RUVA_STRP1 (P66751)
Other databases:
- EMBL: AE004092 - EMBL: CP000017 - RefSeq: NP_270043.1 - RefSeq: YP_283165.1 - ProteinModelPortal: P66751 - SMR: P66751 - EnsemblBacteria: EBSTRT00000000695 - EnsemblBacteria: EBSTRT00000028044 - GeneID: 3571089 - GeneID: 901758 - GenomeReviews: AE004092_GR - GenomeReviews: CP000017_GR - KEGG: spy:SPy_2119 - KEGG: spz:M5005_Spy_1802 - GeneTree: EBGT00050000028402 - HOGENOM: HBG635309 - OMA: LFGFAQK - ProtClustDB: PRK00116 - BioCyc: SPYO160490:SPY2119-MONOMER - BioCyc: SPYO293653:M5005_SPY1802-MONOMER - HAMAP: MF_00031 - InterPro: IPR011114 - InterPro: IPR013849 - InterPro: IPR003583 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR000085 - InterPro: IPR010994 - Gene3D: G3DSA:2.40.50.140 - SMART: SM00278 - TIGRFAMs: TIGR00084
Pfam domain/function: PF07499 RuvA_C; PF01330 RuvA_N; SSF50249 Nucleic_acid_OB; SSF47781 RuvA_2_like; SSF46929 RuvA_C-like
EC number: =3.6.4.12
Molecular weight: Translated: 21880; Mature: 21880
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDYIKGQLTKITAKYIVVEANGLGYMINVANPYSFTDSVNQLVTIYLHQVIREDAHLLF CCCCHHHHHHEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE GFHTEDEKDVFLKLISVSGIGPTTALAIVAVDDNEGLVNAIDNSDIKYLMKFPKIGKKTA EECCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEECCCCCCHHHHHHCCCCCHHHH QQMVLDLAGKFVEAPQETGHTKARSNKAGNTQLDEAIEALLALGYKAKELKKIRAFFEGT HHHHHHHHHHHHHCCHHCCCCHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC SETAEQYIKSALKLLMKG HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYDYIKGQLTKITAKYIVVEANGLGYMINVANPYSFTDSVNQLVTIYLHQVIREDAHLLF CCCCHHHHHHEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE GFHTEDEKDVFLKLISVSGIGPTTALAIVAVDDNEGLVNAIDNSDIKYLMKFPKIGKKTA EECCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEECCCCCCHHHHHHCCCCCHHHH QQMVLDLAGKFVEAPQETGHTKARSNKAGNTQLDEAIEALLALGYKAKELKKIRAFFEGT HHHHHHHHHHHHHCCHHCCCCHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC SETAEQYIKSALKLLMKG HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11296296