Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is ctsR [H]
Identifier: 15675835
GI number: 15675835
Start: 1727217
End: 1727678
Strand: Reverse
Name: ctsR [H]
Synonym: SPy_2074
Alternate gene names: 15675835
Gene position: 1727678-1727217 (Counterclockwise)
Preceding gene: 15675836
Following gene: 15675834
Centisome position: 93.26
GC content: 39.61
Gene sequence:
>462_bases ATGCCAACCAAAAATACTTCAGACAGCATTGAAGAGTATATTAAAGAATTATTAGCTAAGTCAGGAATAGCAGAAATTAA GCGGTCCATGCTAGCAGATTCGTTTCAAGTTGTCCCAAGTCAGATCAACTATGTCATTAAAACCCGTTTTACGGAGAGTC GAGGCTATGAAGTAGAGAGTAAACGAGGTGGTGGAGGCTATATTCGTATTGCCAAGGTTCATTTTTCAGACAAACACCAT CTGATTGGCAATTTAATGGCAACTATTGAAGACTGTATCAGTGAGCAAGTTTTCACGGACTCGATACAATTGCTTTTTGA CGAACACTTATTGACAGAGCGTGAGGGAAATATCATTTTGGCTGTGGCGTCTGATGATGTTTTAGGAACTGATGGTTCAA CTATTCGTGCACGAATGCTCTATCGCTTATTGCAACGAATTGACAGAAAGGGAAGCAATTAA
Upstream 100 bases:
>100_bases AGGTCTTGTATTTGTTATAATAATAGTCAGTTTTAGTCAAAATGTATTGACGTGGTGCTACTAAGTTTTTAGAGTAGCCC GCAAGCAAAGGAGTGACAGC
Downstream 100 bases:
>100_bases TGATTATGTATTCAACGAAGATGCAAGACATTTTTAGACAGGCGCAGTTCCAAGCTGCTCGCTTTGATAGCCATTGCCTG GAAACTTGGCATGTTTTGTT
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Class three stress gene repressor [H]
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MPTKNTSDSIEEYIKELLAKSGIAEIKRSMLADSFQVVPSQINYVIKTRFTESRGYEVESKRGGGGYIRIAKVHFSDKHH LIGNLMATIEDCISEQVFTDSIQLLFDEHLLTEREGNIILAVASDDVLGTDGSTIRARMLYRLLQRIDRKGSN
Sequences:
>Translated_153_residues MPTKNTSDSIEEYIKELLAKSGIAEIKRSMLADSFQVVPSQINYVIKTRFTESRGYEVESKRGGGGYIRIAKVHFSDKHH LIGNLMATIEDCISEQVFTDSIQLLFDEHLLTEREGNIILAVASDDVLGTDGSTIRARMLYRLLQRIDRKGSN >Mature_152_residues PTKNTSDSIEEYIKELLAKSGIAEIKRSMLADSFQVVPSQINYVIKTRFTESRGYEVESKRGGGGYIRIAKVHFSDKHHL IGNLMATIEDCISEQVFTDSIQLLFDEHLLTEREGNIILAVASDDVLGTDGSTIRARMLYRLLQRIDRKGSN
Specific function: Controls the expression of the cellular protein quality control genes clpC, clpE and clpP. Acts as a repressor of these class III stress genes by binding to a directly repeated heptanucleotide operator sequence (A/GGTCAAA NAN A/GGTCAAA). After heat shock,
COG id: COG4463
COG function: function code K; Transcriptional repressor of class III stress genes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CtsR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008463 [H]
Pfam domain/function: PF05848 CtsR [H]
EC number: NA
Molecular weight: Translated: 17237; Mature: 17106
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTKNTSDSIEEYIKELLAKSGIAEIKRSMLADSFQVVPSQINYVIKTRFTESRGYEVES CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC KRGGGGYIRIAKVHFSDKHHLIGNLMATIEDCISEQVFTDSIQLLFDEHLLTEREGNIIL CCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE AVASDDVLGTDGSTIRARMLYRLLQRIDRKGSN EEECCCEECCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PTKNTSDSIEEYIKELLAKSGIAEIKRSMLADSFQVVPSQINYVIKTRFTESRGYEVES CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC KRGGGGYIRIAKVHFSDKHHLIGNLMATIEDCISEQVFTDSIQLLFDEHLLTEREGNIIL CCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE AVASDDVLGTDGSTIRARMLYRLLQRIDRKGSN EEECCCEECCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]