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The map label for this gene is hsdS

Identifier: 15675718

GI number: 15675718

Start: 1587927

End: 1589126

Strand: Direct

Name: hsdS

Synonym: SPy_1905

Alternate gene names: NA

Gene position: 1587927-1589126 (Clockwise)

Preceding gene: 15675717

Following gene: 15675719

Centisome position: 85.72

GC content: 33.5

Gene sequence:

>1200_bases
ATGACAAAATCTAAACAGCCTCAATATCGCTTTGACGGTTTTGAAGGGGAGTGGGAAGAAAAAGAACTAGGGGATATTGT
TCAAATTACAATGGGCCAATCTCCATCAAGTCAAAATTATACTACAAACCCTTCTGATTATATTCTAGTACAAGGAAATG
CCGATATAAAAAATGGATATGTTTTTCCGCGTGTCTGGACAACACAAATTACAAAACAAGCTGACAAAGGTGATATTATT
CTTAGTGTTAGGGCTCCAGTTGGTGATGTTGGAAAGACAAATTATCATGTTATTATTGGGCGTGGAGTTGCTGCTATAAA
AGGTAATGAATTTATCTTTCAAATATTAAAATACTTGAAAGAAATTGGTTATTGGAAAAGAATTAGTACAGGTTCAACTT
TTGATAGCATTAGCTCTAGTGATATCAAATATGCTAAAATTCAAATTCCCTCCCTCCCTGAACAAGAAGCCATTGGCGAA
CTTTTCCAAATGGTTGATCAATTGATTCAGTTGCAGGATCAAAAGCTAGCAACCCTTAAAGAACAAAAGCAAACCTTCCT
CAGGAAAATGTTCCCAGCTCAAGGACAAAAAGTCCCTGAAATCCGTTTACAAGGTTTTAAAGGAGAGTGGGAAGAGAAGA
AATTGAGGGAAGTATCTACTCATAGAAGTGGAACGGCAATTGAAAAATATTTTGATTCGGAAGGTGAATTTAAAGTCATT
TCAATAGGTAGTTATGGAACTAATAACCTCTATGTAGACCAAAATATTAGAGCAGTCTCAAATGAACTTACTAATTCTAA
ATTAGTTGCCTCCGGTGAATTAACAATGGTACTCAATGATAAGACAGCGAATGGGGCAATAATCGGAAGATGTCTACTTA
TTACAGAAAATAATAAATACGTTGTTAATCAAAGAACAGAAATTATTAGACCAGATATTAATATTTCCTCTTACTATCTT
TTCCATTATTTAAATGGCGAATTTCGTAATGGTATCATTAAAATTGCTCAAGGTGGCACTCAAATCTATGTAAATTATTC
ATCTGTTGAACAATTAAAGATAAATATACCTACATTAAAAGAACAAGAAGCCATTGGTAATTTCTTCCAAACTTTAGACC
AACAAATTGCTCAATCTGAAGAAAAACTAACAGAACTCAAAGCACTCAAACAAACATTACTCAATCGTTTATTCGTATAA

Upstream 100 bases:

>100_bases
CATGAATAAACTCAAATACAAGAGCCAATTTGAACGGGAGTTAGTTCAATTCATTAGAGATCAAATCCAACCCTTAAAAG
GGCACTAGGAAAGGAAAGAG

Downstream 100 bases:

>100_bases
GAAAGGACTCACATGGCAGAGAAAACAACTTCACTCCGTCAAGCACTATGGCATTCGGCCGACCAATTACGTGGCCAAAT
GGATGCCAATGACTATAAAA

Product: putative type I site-specific deoxyribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MTKSKQPQYRFDGFEGEWEEKELGDIVQITMGQSPSSQNYTTNPSDYILVQGNADIKNGYVFPRVWTTQITKQADKGDII
LSVRAPVGDVGKTNYHVIIGRGVAAIKGNEFIFQILKYLKEIGYWKRISTGSTFDSISSSDIKYAKIQIPSLPEQEAIGE
LFQMVDQLIQLQDQKLATLKEQKQTFLRKMFPAQGQKVPEIRLQGFKGEWEEKKLREVSTHRSGTAIEKYFDSEGEFKVI
SIGSYGTNNLYVDQNIRAVSNELTNSKLVASGELTMVLNDKTANGAIIGRCLLITENNKYVVNQRTEIIRPDINISSYYL
FHYLNGEFRNGIIKIAQGGTQIYVNYSSVEQLKINIPTLKEQEAIGNFFQTLDQQIAQSEEKLTELKALKQTLLNRLFV

Sequences:

>Translated_399_residues
MTKSKQPQYRFDGFEGEWEEKELGDIVQITMGQSPSSQNYTTNPSDYILVQGNADIKNGYVFPRVWTTQITKQADKGDII
LSVRAPVGDVGKTNYHVIIGRGVAAIKGNEFIFQILKYLKEIGYWKRISTGSTFDSISSSDIKYAKIQIPSLPEQEAIGE
LFQMVDQLIQLQDQKLATLKEQKQTFLRKMFPAQGQKVPEIRLQGFKGEWEEKKLREVSTHRSGTAIEKYFDSEGEFKVI
SIGSYGTNNLYVDQNIRAVSNELTNSKLVASGELTMVLNDKTANGAIIGRCLLITENNKYVVNQRTEIIRPDINISSYYL
FHYLNGEFRNGIIKIAQGGTQIYVNYSSVEQLKINIPTLKEQEAIGNFFQTLDQQIAQSEEKLTELKALKQTLLNRLFV
>Mature_398_residues
TKSKQPQYRFDGFEGEWEEKELGDIVQITMGQSPSSQNYTTNPSDYILVQGNADIKNGYVFPRVWTTQITKQADKGDIIL
SVRAPVGDVGKTNYHVIIGRGVAAIKGNEFIFQILKYLKEIGYWKRISTGSTFDSISSSDIKYAKIQIPSLPEQEAIGEL
FQMVDQLIQLQDQKLATLKEQKQTFLRKMFPAQGQKVPEIRLQGFKGEWEEKKLREVSTHRSGTAIEKYFDSEGEFKVIS
IGSYGTNNLYVDQNIRAVSNELTNSKLVASGELTMVLNDKTANGAIIGRCLLITENNKYVVNQRTEIIRPDINISSYYLF
HYLNGEFRNGIIKIAQGGTQIYVNYSSVEQLKINIPTLKEQEAIGNFFQTLDQQIAQSEEKLTELKALKQTLLNRLFV

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0130 and MJ1218 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 45273; Mature: 45142

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSKQPQYRFDGFEGEWEEKELGDIVQITMGQSPSSQNYTTNPSDYILVQGNADIKNGY
CCCCCCCCEEECCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCE
VFPRVWTTQITKQADKGDIILSVRAPVGDVGKTNYHVIIGRGVAAIKGNEFIFQILKYLK
EECEEHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHHHHHH
EIGYWKRISTGSTFDSISSSDIKYAKIQIPSLPEQEAIGELFQMVDQLIQLQDQKLATLK
HCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EQKQTFLRKMFPAQGQKVPEIRLQGFKGEWEEKKLREVSTHRSGTAIEKYFDSEGEFKVI
HHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEE
SIGSYGTNNLYVDQNIRAVSNELTNSKLVASGELTMVLNDKTANGAIIGRCLLITENNKY
EECCCCCCCEEECCCHHHHHHHCCCCEEEECCCEEEEEECCCCCCEEEEEEEEEECCCEE
VVNQRTEIIRPDINISSYYLFHYLNGEFRNGIIKIAQGGTQIYVNYSSVEQLKINIPTLK
EEECCCEEECCCCCCCEEEEEEEECCHHCCCEEEEECCCEEEEEEECCEEEEEEECCCCC
EQEAIGNFFQTLDQQIAQSEEKLTELKALKQTLLNRLFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKSKQPQYRFDGFEGEWEEKELGDIVQITMGQSPSSQNYTTNPSDYILVQGNADIKNGY
CCCCCCCEEECCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCE
VFPRVWTTQITKQADKGDIILSVRAPVGDVGKTNYHVIIGRGVAAIKGNEFIFQILKYLK
EECEEHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHHHHHH
EIGYWKRISTGSTFDSISSSDIKYAKIQIPSLPEQEAIGELFQMVDQLIQLQDQKLATLK
HCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EQKQTFLRKMFPAQGQKVPEIRLQGFKGEWEEKKLREVSTHRSGTAIEKYFDSEGEFKVI
HHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEE
SIGSYGTNNLYVDQNIRAVSNELTNSKLVASGELTMVLNDKTANGAIIGRCLLITENNKY
EECCCCCCCEEECCCHHHHHHHCCCCEEEECCCEEEEEECCCCCCEEEEEEEEEECCCEE
VVNQRTEIIRPDINISSYYLFHYLNGEFRNGIIKIAQGGTQIYVNYSSVEQLKINIPTLK
EEECCCEEECCCCCCCEEEEEEEECCHHCCCEEEEECCCEEEEEEECCEEEEEEECCCCC
EQEAIGNFFQTLDQQIAQSEEKLTELKALKQTLLNRLFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]