Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is pfl [H]
Identifier: 15675672
GI number: 15675672
Start: 1532792
End: 1535119
Strand: Direct
Name: pfl [H]
Synonym: SPy_1849
Alternate gene names: 15675672
Gene position: 1532792-1535119 (Clockwise)
Preceding gene: 15675670
Following gene: 15675675
Centisome position: 82.74
GC content: 41.88
Gene sequence:
>2328_bases ATGGCAACTGTTAAAACCAATACAGATGTTTTCGAAAAAGCTTGGGAAGGCTTTAAAGGAACTGACTGGAAAGAAAAAGC AAGTGTCTCACGTTTTGTACAAGCTAACTACACCCCATACGATGGCGATGAATCTTTCTTGGCTGGTGCTACTGAACGTT CACTTCACATCAAAAAAGTTATCGAAGAAACAAAAGCACACTATGAAGCTACACGTTTCCCATACGATACTCGTCCAACT TCAATTGCTGACATTCCTGCTGGTTTCATCGATAAAGAAAATGAATTAATTTATGGTATTCAAAACGATGAATTGTTCAA ATTGAACTTCATGCCAAAAGGTGGTATCCGTATGGCGGAAACGACCCTTAAAGAAAACGGCTATGAACCAGACCCAGCAG TACATGAAATCTTTACTAAGTATGTGACAACTGTTAACGACGGTATCTTCCGCGCTTATACTTCAAATATTCGTCGCGCT CGTCATGCCCACACTGTAACTGGTCTTCCAGATGCTTACTCACGTGGACGTATCATCGGTGTTTACGCTCGTCTTGCTCT TTACGGTGCTGACTACTTGATGCAAGAAAAAGTCAATGACTGGAATGCTATCACTGAAATCGATGAAGAATCCATTCGTC TTCGCGAAGAAGTTAACCTTCAATACCAAGCTCTTGGTGAAGTGGTTAAACTTGGTGACCTTTACGGAGTTGATGTTCGT CGCCCAGCACAAAACGTTAAAGAAGCTATCCAATGGGTAAACATCGCTTTCATGGCTGTATGTCGTGTGATCAACGGTGC TGCTACTTCTCTTGGACGTGTGCCAATCGTTCTTGATATCTTTGCAGAACGTGACCTTGCTCGCGGTACCTTTACAGAAT CAGAAATCCAAGAATTTGTTGATGATTTTGTCCTTAAACTCCGTACCGTAAAATTTGGTCGTACGAAAGCTTACGATGCG CTTTACTCAGGTGACCCAACATTCATCACAACTTCTATGGCTGGTATGGGTAACGATGGTCGTCACCGTGTAACTAAGAT GGACTACCGTTTCTTGAACACGCTTGATAATATTGGTAACTCTCCAGAACCAAACTTGACTGTTCTTTGGACTGACCAAC TGCCAGAAACATTCCGTCGCTACTGTATGAAAATGAGCCACAAGCACTCTTCTATCCAATATGAAGGTGTGACAACAATG GCTAAAGAAGGTTATGGTGAAATGTCATGTATTTCATGTTGTGTGTCACCACTTGACCCAGAAAATGAAGAACAACGTCA TAACATCCAATACTTCGGTGCTCGTGTAAACGTTCTTAAAGCCCTTCTTACTGGTCTTAACGGTGGTTACGATGATGTTC ACAGAGACTACAAAGTGTTTAACGTTGTTGAACCAATCACATCAGAAGTTCTTGAGTACGACGAAGTTATGGCTAACTTT GAGAAATCTCTTGACTGGTTGACAGATACTTATGTAGATGCGCTTAACATCATCCACTACATGACTGATAAATACAACTA CGAAGCAGTTCAAATGGCCTTCTTGCCAACACACCAACGTGCTAACATGGGATTCGGTATCTGTGGTTTCGCTAACACAG TTGATACCTTGTCAGCTATTAAATACGCAACTGTTAAAACTATCCGCGATGAAAATGGCTACATCTATGACTACGAAGTA ACAGGTGACTTCCCTCGTTACGGTGAAGATGACGACCGTGTTGATGACATCGCGAAATGGTTGATGGAAGCTTACCACAC ACGTCTTGCAAGCCACAAACTTTACAAGAATGCTGAGGCTTCAGTATCACTTCTTACCATCACTTCAAACGTTGCTTACT CTAAACAAACTGGTAACTCTCCAGTTCACCGCGGCGTCTTCTTAAACGAAGATGGTACAGTTAACACTAGCCAAGTGGAA TTCTTCTCACCAGGTGCTAACCCATCTAACAAAGCAAAAGGTGGCTGGTTACAAAACCTTAACTCACTTGCTAAACTGGA ATTCTCACATGCTAACGATGGTATCTCATTGACTACTCAAGTATCACCTCGTGCTCTTGGTAAAACATTTGACGAACAAG TTGACAACTTGGTAACAGTGCTTGACGGTTACTTTGAAAATGGTGGTCAGCACGTTAACTTGAACGTTATGGACCTTAAC GATGTTTATGACAAAATCATGAACGGCGAAGACGTTATCGTACGTATCTCTGGTTACTGTGTCAACACCAAATACCTTAC ACCAGAACAAAAAACTGAATTGACACAACGTGTCTTCCACGAAGTGCTTTCCATGGACGATGCTGCTGAAGCTATTTCAA GTAAATAG
Upstream 100 bases:
>100_bases TTTTGTCAAGAATTTTGCTTGGGAAAACGTTTCCTATGTGTTAAACTTAGAATTGTAAATGTAACAGATCGCTTTGTTAC TAGAATTTAAGGAGAAATTT
Downstream 100 bases:
>100_bases TAGTATCTAAATGATCAATAACTTATAAAAAAGAACAGCCATCTCATTTGATTCAAAATGAGATGGCTATTCTTTTTTCA CTTATAATCACTCTAATCGC
Product: putative pyruvate formate-lyase
Products: NA
Alternate protein names: Pyruvate formate-lyase [H]
Number of amino acids: Translated: 775; Mature: 774
Protein sequence:
>775_residues MATVKTNTDVFEKAWEGFKGTDWKEKASVSRFVQANYTPYDGDESFLAGATERSLHIKKVIEETKAHYEATRFPYDTRPT SIADIPAGFIDKENELIYGIQNDELFKLNFMPKGGIRMAETTLKENGYEPDPAVHEIFTKYVTTVNDGIFRAYTSNIRRA RHAHTVTGLPDAYSRGRIIGVYARLALYGADYLMQEKVNDWNAITEIDEESIRLREEVNLQYQALGEVVKLGDLYGVDVR RPAQNVKEAIQWVNIAFMAVCRVINGAATSLGRVPIVLDIFAERDLARGTFTESEIQEFVDDFVLKLRTVKFGRTKAYDA LYSGDPTFITTSMAGMGNDGRHRVTKMDYRFLNTLDNIGNSPEPNLTVLWTDQLPETFRRYCMKMSHKHSSIQYEGVTTM AKEGYGEMSCISCCVSPLDPENEEQRHNIQYFGARVNVLKALLTGLNGGYDDVHRDYKVFNVVEPITSEVLEYDEVMANF EKSLDWLTDTYVDALNIIHYMTDKYNYEAVQMAFLPTHQRANMGFGICGFANTVDTLSAIKYATVKTIRDENGYIYDYEV TGDFPRYGEDDDRVDDIAKWLMEAYHTRLASHKLYKNAEASVSLLTITSNVAYSKQTGNSPVHRGVFLNEDGTVNTSQVE FFSPGANPSNKAKGGWLQNLNSLAKLEFSHANDGISLTTQVSPRALGKTFDEQVDNLVTVLDGYFENGGQHVNLNVMDLN DVYDKIMNGEDVIVRISGYCVNTKYLTPEQKTELTQRVFHEVLSMDDAAEAISSK
Sequences:
>Translated_775_residues MATVKTNTDVFEKAWEGFKGTDWKEKASVSRFVQANYTPYDGDESFLAGATERSLHIKKVIEETKAHYEATRFPYDTRPT SIADIPAGFIDKENELIYGIQNDELFKLNFMPKGGIRMAETTLKENGYEPDPAVHEIFTKYVTTVNDGIFRAYTSNIRRA RHAHTVTGLPDAYSRGRIIGVYARLALYGADYLMQEKVNDWNAITEIDEESIRLREEVNLQYQALGEVVKLGDLYGVDVR RPAQNVKEAIQWVNIAFMAVCRVINGAATSLGRVPIVLDIFAERDLARGTFTESEIQEFVDDFVLKLRTVKFGRTKAYDA LYSGDPTFITTSMAGMGNDGRHRVTKMDYRFLNTLDNIGNSPEPNLTVLWTDQLPETFRRYCMKMSHKHSSIQYEGVTTM AKEGYGEMSCISCCVSPLDPENEEQRHNIQYFGARVNVLKALLTGLNGGYDDVHRDYKVFNVVEPITSEVLEYDEVMANF EKSLDWLTDTYVDALNIIHYMTDKYNYEAVQMAFLPTHQRANMGFGICGFANTVDTLSAIKYATVKTIRDENGYIYDYEV TGDFPRYGEDDDRVDDIAKWLMEAYHTRLASHKLYKNAEASVSLLTITSNVAYSKQTGNSPVHRGVFLNEDGTVNTSQVE FFSPGANPSNKAKGGWLQNLNSLAKLEFSHANDGISLTTQVSPRALGKTFDEQVDNLVTVLDGYFENGGQHVNLNVMDLN DVYDKIMNGEDVIVRISGYCVNTKYLTPEQKTELTQRVFHEVLSMDDAAEAISSK >Mature_774_residues ATVKTNTDVFEKAWEGFKGTDWKEKASVSRFVQANYTPYDGDESFLAGATERSLHIKKVIEETKAHYEATRFPYDTRPTS IADIPAGFIDKENELIYGIQNDELFKLNFMPKGGIRMAETTLKENGYEPDPAVHEIFTKYVTTVNDGIFRAYTSNIRRAR HAHTVTGLPDAYSRGRIIGVYARLALYGADYLMQEKVNDWNAITEIDEESIRLREEVNLQYQALGEVVKLGDLYGVDVRR PAQNVKEAIQWVNIAFMAVCRVINGAATSLGRVPIVLDIFAERDLARGTFTESEIQEFVDDFVLKLRTVKFGRTKAYDAL YSGDPTFITTSMAGMGNDGRHRVTKMDYRFLNTLDNIGNSPEPNLTVLWTDQLPETFRRYCMKMSHKHSSIQYEGVTTMA KEGYGEMSCISCCVSPLDPENEEQRHNIQYFGARVNVLKALLTGLNGGYDDVHRDYKVFNVVEPITSEVLEYDEVMANFE KSLDWLTDTYVDALNIIHYMTDKYNYEAVQMAFLPTHQRANMGFGICGFANTVDTLSAIKYATVKTIRDENGYIYDYEVT GDFPRYGEDDDRVDDIAKWLMEAYHTRLASHKLYKNAEASVSLLTITSNVAYSKQTGNSPVHRGVFLNEDGTVNTSQVEF FSPGANPSNKAKGGWLQNLNSLAKLEFSHANDGISLTTQVSPRALGKTFDEQVDNLVTVLDGYFENGGQHVNLNVMDLND VYDKIMNGEDVIVRISGYCVNTKYLTPEQKTELTQRVFHEVLSMDDAAEAISSK
Specific function: Glucose metabolism (nonoxidative conversion). [C]
COG id: COG1882
COG function: function code C; Pyruvate-formate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 pyruvate formate lyase domain [H]
Homologues:
Organism=Escherichia coli, GI1787131, Length=770, Percent_Identity=43.8961038961039, Blast_Score=619, Evalue=1e-178, Organism=Escherichia coli, GI48994926, Length=779, Percent_Identity=42.3620025673941, Blast_Score=594, Evalue=1e-171,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005949 - InterPro: IPR001150 - InterPro: IPR019777 - InterPro: IPR004184 [H]
Pfam domain/function: PF01228 Gly_radical; PF02901 PFL [H]
EC number: =2.3.1.54 [H]
Molecular weight: Translated: 87529; Mature: 87398
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00850 GLY_RADICAL_1 ; PS51149 GLY_RADICAL_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVKTNTDVFEKAWEGFKGTDWKEKASVSRFVQANYTPYDGDESFLAGATERSLHIKKV CCEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHH IEETKAHYEATRFPYDTRPTSIADIPAGFIDKENELIYGIQNDELFKLNFMPKGGIRMAE HHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHH TTLKENGYEPDPAVHEIFTKYVTTVNDGIFRAYTSNIRRARHAHTVTGLPDAYSRGRIIG HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEH VYARLALYGADYLMQEKVNDWNAITEIDEESIRLREEVNLQYQALGEVVKLGDLYGVDVR HHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC RPAQNVKEAIQWVNIAFMAVCRVINGAATSLGRVPIVLDIFAERDLARGTFTESEIQEFV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCCCCCHHHHHHHH DDFVLKLRTVKFGRTKAYDALYSGDPTFITTSMAGMGNDGRHRVTKMDYRFLNTLDNIGN HHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC SPEPNLTVLWTDQLPETFRRYCMKMSHKHSSIQYEGVTTMAKEGYGEMSCISCCVSPLDP CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCHHHHHHHCCCCCC ENEEQRHNIQYFGARVNVLKALLTGLNGGYDDVHRDYKVFNVVEPITSEVLEYDEVMANF CCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH EKSLDWLTDTYVDALNIIHYMTDKYNYEAVQMAFLPTHQRANMGFGICGFANTVDTLSAI HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEECCCHHHHHHHHHH KYATVKTIRDENGYIYDYEVTGDFPRYGEDDDRVDDIAKWLMEAYHTRLASHKLYKNAEA HHHHHHEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SVSLLTITSNVAYSKQTGNSPVHRGVFLNEDGTVNTSQVEFFSPGANPSNKAKGGWLQNL CEEEEEEECCCEECCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHH NSLAKLEFSHANDGISLTTQVSPRALGKTFDEQVDNLVTVLDGYFENGGQHVNLNVMDLN HHHHHEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHH DVYDKIMNGEDVIVRISGYCVNTKYLTPEQKTELTQRVFHEVLSMDDAAEAISSK HHHHHHCCCCEEEEEEEEEEEECEECCCHHHHHHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure ATVKTNTDVFEKAWEGFKGTDWKEKASVSRFVQANYTPYDGDESFLAGATERSLHIKKV CEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHH IEETKAHYEATRFPYDTRPTSIADIPAGFIDKENELIYGIQNDELFKLNFMPKGGIRMAE HHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHH TTLKENGYEPDPAVHEIFTKYVTTVNDGIFRAYTSNIRRARHAHTVTGLPDAYSRGRIIG HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEH VYARLALYGADYLMQEKVNDWNAITEIDEESIRLREEVNLQYQALGEVVKLGDLYGVDVR HHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC RPAQNVKEAIQWVNIAFMAVCRVINGAATSLGRVPIVLDIFAERDLARGTFTESEIQEFV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCCCCCHHHHHHHH DDFVLKLRTVKFGRTKAYDALYSGDPTFITTSMAGMGNDGRHRVTKMDYRFLNTLDNIGN HHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC SPEPNLTVLWTDQLPETFRRYCMKMSHKHSSIQYEGVTTMAKEGYGEMSCISCCVSPLDP CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCHHHHHHHCCCCCC ENEEQRHNIQYFGARVNVLKALLTGLNGGYDDVHRDYKVFNVVEPITSEVLEYDEVMANF CCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH EKSLDWLTDTYVDALNIIHYMTDKYNYEAVQMAFLPTHQRANMGFGICGFANTVDTLSAI HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEECCCHHHHHHHHHH KYATVKTIRDENGYIYDYEVTGDFPRYGEDDDRVDDIAKWLMEAYHTRLASHKLYKNAEA HHHHHHEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SVSLLTITSNVAYSKQTGNSPVHRGVFLNEDGTVNTSQVEFFSPGANPSNKAKGGWLQNL CEEEEEEECCCEECCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHH NSLAKLEFSHANDGISLTTQVSPRALGKTFDEQVDNLVTVLDGYFENGGQHVNLNVMDLN HHHHHEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHH DVYDKIMNGEDVIVRISGYCVNTKYLTPEQKTELTQRVFHEVLSMDDAAEAISSK HHHHHHCCCCEEEEEEEEEEEECEECCCHHHHHHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550181; 12397186 [H]