Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is isdE [H]
Identifier: 15675633
GI number: 15675633
Start: 1487089
End: 1487973
Strand: Reverse
Name: isdE [H]
Synonym: SPy_1795
Alternate gene names: 15675633
Gene position: 1487973-1487089 (Counterclockwise)
Preceding gene: 15675634
Following gene: 15675632
Centisome position: 80.32
GC content: 40.56
Gene sequence:
>885_bases ATGATAAAACGATGTAAAGGAATTGGTCTAGCCTTAATGGCCTTCTTTTTGGTAGCTTGTGTGAATCAGCACCCTAAAAC GGCTAAAGAGACTGAACAGCAGAGAATTGTAGCCACTTCGGTTGCTGTGGTTGATATCTGTGACCGTTTAAATTTAGACC TCGTTGGGGTTTGTGATAGTAAATTATATACCCTTCCTAAACGCTATGATGCTGTTAAGCGTGTGGGTTTACCCATGAAT CCTGATATAGAGTTGATTGCTTCTTTGAAACCAACTTGGATTTTGAGTCCCAATTCTTTACAAGAAGATTTGGAACCCAA GTATCAAAAATTGGATACTGAGTATGGTTTTTTGAACTTACGAAGTGTTGAGGGCATGTACCAGTCCATTGATGATTTAG GGAACCTTTTCCAACGTCAACAAGAAGCAAAAGAATTGCGCCAGCAATACCAGGACTATTATCGTGCTTTCCAAGCTAAA CGTAAGGGGAAGAAAAAGCCTAAAGTGCTTATTCTTATGGGCTTGCCAGGTAGTTATTTGGTGGCGACGAACCAATCTTA TGTAGGGAATCTTTTGGACTTGGCAGGTGGTGAGAATGTTTATCAGTCAGATGAGAAAGAATTTCTATCAGCTAATCCTG AAGACATGCTGGCTAAGGAGCCTGACTTGATTTTACGAACAGCTCATGCCATTCCAGACAAGGTAAAAGTGATGTTTGAC AAAGAATTTGCTGAAAATGATATTTGGAAACATTTTACGGCAGTCAAGGAAGGGAAAGTCTATGATTTGGACAATACCCT GTTTGGCATGAGTGCTAAATTGAACTACCCAGAAGCCTTGGACACCTTAACACAGCTTTTTGACCACGTGGGAGATCATC CGTAA
Upstream 100 bases:
>100_bases CGGTCTAAAAAAGACTTATCAATCATGATTTACTACTTTCCAACTTTTTTTCTGATGTTAGGAGGGTTTGCTGTATGGGT TTGGAAAAAGAGGAAAAAAA
Downstream 100 bases:
>100_bases CATGACAGCATCAGATTTACAAAGGGATCAATCCCTACTGGCTAAAAAACGTTTCAGAAGTGGTCTTTATCTAGTTCTTT TAATTCTCAGCCTCCTATTT
Product: putative ABC transporter periplasmic binding protein
Products: NA
Alternate protein names: Iron-regulated surface determinant protein E; Staphylococcal iron-regulated protein F [H]
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MIKRCKGIGLALMAFFLVACVNQHPKTAKETEQQRIVATSVAVVDICDRLNLDLVGVCDSKLYTLPKRYDAVKRVGLPMN PDIELIASLKPTWILSPNSLQEDLEPKYQKLDTEYGFLNLRSVEGMYQSIDDLGNLFQRQQEAKELRQQYQDYYRAFQAK RKGKKKPKVLILMGLPGSYLVATNQSYVGNLLDLAGGENVYQSDEKEFLSANPEDMLAKEPDLILRTAHAIPDKVKVMFD KEFAENDIWKHFTAVKEGKVYDLDNTLFGMSAKLNYPEALDTLTQLFDHVGDHP
Sequences:
>Translated_294_residues MIKRCKGIGLALMAFFLVACVNQHPKTAKETEQQRIVATSVAVVDICDRLNLDLVGVCDSKLYTLPKRYDAVKRVGLPMN PDIELIASLKPTWILSPNSLQEDLEPKYQKLDTEYGFLNLRSVEGMYQSIDDLGNLFQRQQEAKELRQQYQDYYRAFQAK RKGKKKPKVLILMGLPGSYLVATNQSYVGNLLDLAGGENVYQSDEKEFLSANPEDMLAKEPDLILRTAHAIPDKVKVMFD KEFAENDIWKHFTAVKEGKVYDLDNTLFGMSAKLNYPEALDTLTQLFDHVGDHP >Mature_294_residues MIKRCKGIGLALMAFFLVACVNQHPKTAKETEQQRIVATSVAVVDICDRLNLDLVGVCDSKLYTLPKRYDAVKRVGLPMN PDIELIASLKPTWILSPNSLQEDLEPKYQKLDTEYGFLNLRSVEGMYQSIDDLGNLFQRQQEAKELRQQYQDYYRAFQAK RKGKKKPKVLILMGLPGSYLVATNQSYVGNLLDLAGGENVYQSDEKEFLSANPEDMLAKEPDLILRTAHAIPDKVKVMFD KEFAENDIWKHFTAVKEGKVYDLDNTLFGMSAKLNYPEALDTLTQLFDHVGDHP
Specific function: Involved in heme (porphyrin) scavenging. Binds Fe(2+) and Fe(3+) heme but the largest fraction is Fe(2+) heme. Functions as a high-affinity heme binding protein and probably has a role in relaying heme-iron from cell wall-anchored isd proteins receptors t
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019957 - InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 33385; Mature: 33385
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRCKGIGLALMAFFLVACVNQHPKTAKETEQQRIVATSVAVVDICDRLNLDLVGVCDS CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC KLYTLPKRYDAVKRVGLPMNPDIELIASLKPTWILSPNSLQEDLEPKYQKLDTEYGFLNL HHHHCHHHHHHHHHCCCCCCCCHHHHCCCCCEEEECCCHHHHHHCHHHHHHCCCCCEEEH RSVEGMYQSIDDLGNLFQRQQEAKELRQQYQDYYRAFQAKRKGKKKPKVLILMGLPGSYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEE VATNQSYVGNLLDLAGGENVYQSDEKEFLSANPEDMLAKEPDLILRTAHAIPDKVKVMFD EECCHHHHHHHHHHCCCCCHHHCCHHHHHCCCHHHHHHCCCHHHHHHHHCCCCHHHHEEC KEFAENDIWKHFTAVKEGKVYDLDNTLFGMSAKLNYPEALDTLTQLFDHVGDHP HHHHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIKRCKGIGLALMAFFLVACVNQHPKTAKETEQQRIVATSVAVVDICDRLNLDLVGVCDS CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC KLYTLPKRYDAVKRVGLPMNPDIELIASLKPTWILSPNSLQEDLEPKYQKLDTEYGFLNL HHHHCHHHHHHHHHCCCCCCCCHHHHCCCCCEEEECCCHHHHHHCHHHHHHCCCCCEEEH RSVEGMYQSIDDLGNLFQRQQEAKELRQQYQDYYRAFQAKRKGKKKPKVLILMGLPGSYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEE VATNQSYVGNLLDLAGGENVYQSDEKEFLSANPEDMLAKEPDLILRTAHAIPDKVKVMFD EECCHHHHHHHHHHCCCCCHHHCCHHHHHCCCHHHHHHCCCHHHHHHHHCCCCHHHHEEC KEFAENDIWKHFTAVKEGKVYDLDNTLFGMSAKLNYPEALDTLTQLFDHVGDHP HHHHHHHHHHHHHHHHCCCEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA