Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is yidA [H]
Identifier: 15675557
GI number: 15675557
Start: 1412270
End: 1413094
Strand: Reverse
Name: yidA [H]
Synonym: SPy_1700
Alternate gene names: 15675557
Gene position: 1413094-1412270 (Counterclockwise)
Preceding gene: 15675558
Following gene: 15675555
Centisome position: 76.28
GC content: 42.06
Gene sequence:
>825_bases ATGATTCAACTAATTGCAATTGATTTGGACGGCACCTTATTAAACCAGGACAAACAGATTCCAAAAGAGAATATCACAGC CATCCAAGAAGCAGCTCAGTCAGGCTTAAAAATTGTCTTATGCACAGGCCGGCCTCAGTCAGGGACAAGACCCTATTTTG ACCAATTAGGTTTGACACAAGAGGAATTCCTCATTATCAATAATGGCTGTAGTACTTATAGTAGTCCTGACTGGCAATTA CGCCATTCAAAAATGTTGAAGGTTTCAGATATTGAATTGCTGGAAGAGCTAAGCCAAAGTTTTCCAGATATTTACCTGAC TTTAACTGAGGAAAACGATTATTTGGTGCTTGAAGAAGAAGTGCCAGACCTTGTGCAGGAAGATGGAGATTTGGTATTTA CCATTGTCAAGCCTGTCTCCTTAGCAGAGCTGTCGGACACTCCTCGCCTGATTTTTCAAGCCATGTACTTAGGAGAAAAA GCTGCGCTAGATGCCTTTGAACGTGCGGTGAGAAATCAGCTTAGTCAGAGTTTTCATGTTGTTCGTAGCCAAGATAATAT TTTAGAAATTCTCCCTCAGGGAGTCAGCAAGGCATCGGCTCTCAAAGAATTAGTAGAAGATTTGGGTTTAACTGCTGACC AAGTGATGGCTATTGGGGATGCTCCCAATGACATTGAGATGTTAACTTATGCTGGTTTAGGAGTTGCTATGGAAAATGCT TCAGCAGCTATCAAGCCATTAGCTGACAAAGTCACTTTGACTAATGATATGGCGGGTGTGGCCCAGGCTATCCGTCAGTT TGCACTTGTAGCTCAAAAAGACTAA
Upstream 100 bases:
>100_bases GAATGTTATGCCTTGGTTGTTTTACTCACGACTTTACGCATGATTGGCAACCGTAAAAAATGGAACCTCCCTAAAATCAA ATGGAAAGAGGAAAGATAGG
Downstream 100 bases:
>100_bases CAATTAACGTAAAAAGGTTCCCAAAAGGAACCTTTTTACGTTAATAGAGGCAAGCCCATAGCAGCCATTTCTTCGGCAGG AACGATCATGTCATCTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MIQLIAIDLDGTLLNQDKQIPKENITAIQEAAQSGLKIVLCTGRPQSGTRPYFDQLGLTQEEFLIINNGCSTYSSPDWQL RHSKMLKVSDIELLEELSQSFPDIYLTLTEENDYLVLEEEVPDLVQEDGDLVFTIVKPVSLAELSDTPRLIFQAMYLGEK AALDAFERAVRNQLSQSFHVVRSQDNILEILPQGVSKASALKELVEDLGLTADQVMAIGDAPNDIEMLTYAGLGVAMENA SAAIKPLADKVTLTNDMAGVAQAIRQFALVAQKD
Sequences:
>Translated_274_residues MIQLIAIDLDGTLLNQDKQIPKENITAIQEAAQSGLKIVLCTGRPQSGTRPYFDQLGLTQEEFLIINNGCSTYSSPDWQL RHSKMLKVSDIELLEELSQSFPDIYLTLTEENDYLVLEEEVPDLVQEDGDLVFTIVKPVSLAELSDTPRLIFQAMYLGEK AALDAFERAVRNQLSQSFHVVRSQDNILEILPQGVSKASALKELVEDLGLTADQVMAIGDAPNDIEMLTYAGLGVAMENA SAAIKPLADKVTLTNDMAGVAQAIRQFALVAQKD >Mature_274_residues MIQLIAIDLDGTLLNQDKQIPKENITAIQEAAQSGLKIVLCTGRPQSGTRPYFDQLGLTQEEFLIINNGCSTYSSPDWQL RHSKMLKVSDIELLEELSQSFPDIYLTLTEENDYLVLEEEVPDLVQEDGDLVFTIVKPVSLAELSDTPRLIFQAMYLGEK AALDAFERAVRNQLSQSFHVVRSQDNILEILPQGVSKASALKELVEDLGLTADQVMAIGDAPNDIEMLTYAGLGVAMENA SAAIKPLADKVTLTNDMAGVAQAIRQFALVAQKD
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI2367265, Length=269, Percent_Identity=34.5724907063197, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1786982, Length=277, Percent_Identity=28.158844765343, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87081741, Length=249, Percent_Identity=26.5060240963855, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI48994981, Length=273, Percent_Identity=26.3736263736264, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87081790, Length=264, Percent_Identity=23.1060606060606, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1787043, Length=283, Percent_Identity=24.3816254416961, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 30112; Mature: 30112
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: PS01228 COF_1 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQLIAIDLDGTLLNQDKQIPKENITAIQEAAQSGLKIVLCTGRPQSGTRPYFDQLGLTQ CEEEEEEECCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCH EEFLIINNGCSTYSSPDWQLRHSKMLKVSDIELLEELSQSFPDIYLTLTEENDYLVLEEE HHEEEEECCCCCCCCCCCEEHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEHHH VPDLVQEDGDLVFTIVKPVSLAELSDTPRLIFQAMYLGEKAALDAFERAVRNQLSQSFHV CHHHHHCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VRSQDNILEILPQGVSKASALKELVEDLGLTADQVMAIGDAPNDIEMLTYAGLGVAMENA HCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHEEEECCCCCCHHEEEECCCCEEECCC SAAIKPLADKVTLTNDMAGVAQAIRQFALVAQKD HHHHHHHHHHEEECHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIQLIAIDLDGTLLNQDKQIPKENITAIQEAAQSGLKIVLCTGRPQSGTRPYFDQLGLTQ CEEEEEEECCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCH EEFLIINNGCSTYSSPDWQLRHSKMLKVSDIELLEELSQSFPDIYLTLTEENDYLVLEEE HHEEEEECCCCCCCCCCCEEHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEHHH VPDLVQEDGDLVFTIVKPVSLAELSDTPRLIFQAMYLGEKAALDAFERAVRNQLSQSFHV CHHHHHCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VRSQDNILEILPQGVSKASALKELVEDLGLTADQVMAIGDAPNDIEMLTYAGLGVAMENA HCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHEEEECCCCCCHHEEEECCCCEEECCC SAAIKPLADKVTLTNDMAGVAQAIRQFALVAQKD HHHHHHHHHHEEECHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]