Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is typA [H]
Identifier: 15675426
GI number: 15675426
Start: 1255658
End: 1257499
Strand: Reverse
Name: typA [H]
Synonym: SPy_1527
Alternate gene names: 15675426
Gene position: 1257499-1255658 (Counterclockwise)
Preceding gene: 15675427
Following gene: 15675425
Centisome position: 67.88
GC content: 41.59
Gene sequence:
>1842_bases ATGACTAACTTAAGAAACGATATCCGTAACGTAGCGATTATTGCCCACGTTGACCACGGAAAAACAACACTTGTAGATGA ATTATTAAAACAATCCCATACTCTTGATGAGCGTAAAGAGCTTCAAGAGCGTGCCATGGATTCCAATGACCTTGAAAAAG AACGTGGGATTACAATCCTTGCGAAAAATACGGCAGTAGCCTATAACGATGTTCGTATTAACATCATGGATACCCCAGGA CACGCGGACTTCGGTGGTGAAGTTGAACGTATCATGAAAATGGTTGACGGGGTTGTTCTTGTTGTGGATGCCTACGAAGG AACAATGCCCCAGACGCGTTTCGTATTGAAAAAAGCACTTGAGCAAAACCTTATCCCGATCGTTGTGGTGAACAAGATTG ACAAACCTTCAGCTCGTCCAGCAGAAGTTGTAGATGAAGTGCTTGAATTATTCATCGAACTTGGTGCCGATGATGAGCAA TTGGAATTCCCAGTTGTTTACGCATCAGCTATTAATGGAACATCATCATTATCAGATGACCCTGCTGACCAAGAGCATAC TATGGCACCGATCTTTGATACGATTATTGATCATATTCCAGCGCCAGTTGATAATTCAGATGAGCCTTTGCAATTCCAAG TGTCACTTTTGGACTACAACGATTTCGTAGGTCGTATCGGTATCGGTCGTGTTTTCCGTGGTACTGTTAAAGTGGGTGAC CAAGTAACTCTTTCAAAACTTGATGGTACCACTAAAAACTTCCGTGTTACAAAACTGTTTGGTTTCTTCGGTTTGGAACG TCGTGAAATTCAAGAAGCTAAAGCAGGTGACTTGATTGCTGTTTCAGGTATGGAAGATATCTTTGTTGGAGAAACCATTA CACCAACTGACTGTGTGGAAGCTCTGCCAATTCTTCGTATTGATGAGCCAACACTTCAGATGACTTTCTTGGTCAATAAC TCTCCTTTTGCAGGTCGTGAAGGTAAATGGATCACGTCACGTAAGGTTGAAGAACGTCTTTTAGCAGAATTGCAAACAGA CGTGTCACTTCGTGTTGACCCAACAGATTCGCCAGATAAATGGACGGTTTCAGGGCGTGGAGAATTGCATTTATCTATCC TCATTGAAACCATGCGCCGTGAAGGCTATGAACTTCAAGTATCACGTCCAGAAGTTATCATCAAAGAAATTGATGGTGTC AAATGTGAACCGTTTGAGCGTGTTCAAATTGATACACCAGAAGAATATCAGGGTGCAATCATCCAGTCTCTTTCAGAACG TAAAGGGGATATGCTTGATATGCAGATGGTTGGTAATGGTCAAACGCGTTTGATTTTCTTGATTCCTGCACGTGGTTTGA TTGGTTATTCAACAGAGTTTCTTTCAATGACACGTGGATATGGTATCATGAATCATACTTTTGATCAGTATCTACCGGTT GTTCAAGGAGAAATCGGTGGCCGTCATCGTGGTGCCTTGGTTTCTATTGAAAATGGGAAAGCAACGACATATTCAATCAT GCGTATTGAAGAACGTGGAACTATCTTTGTCAATCCAGGTACAGAAGTTTACGAAGGGATGATTGTTGGTGAAAACTCAC GTGATAACGACCTTGGTGTTAACATTACAACAGCTAAGCAAATGACAAATGTCCGTTCAGCGACTAAAGATCAAACTGCA GTTATCAAGACGCCTCGTATCCTAACGCTTGAAGAATCATTAGAGTTCTTGAATGACGACGAATACATGGAAGTAACGCC AGAATCTATCCGCTTGCGTAAACAAATCTTGAATAAAGCTGCGCGTGATAAAGCTAATAAAAAGAAAAAATCAGCCGAAT AG
Upstream 100 bases:
>100_bases TGCTGAAAGTCTGAAAATATTTACAATTGATTAAAACCAGTTTTTTAAAACATTTTGTGTTATACTTATCTAGTTAAAAT ATATTTACTTAGAGGAACAA
Downstream 100 bases:
>100_bases CTTTTGAAGTTAAACTAACTAAATAAAATAGCAAAAAGATATTTAAGAAAAGTCATTTTTTAAAGGTCTTTTTGCGTTTA CAAGTTCCTATGGAATATAA
Product: putative GTP-binding protein TypA/BipA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 613; Mature: 612
Protein sequence:
>613_residues MTNLRNDIRNVAIIAHVDHGKTTLVDELLKQSHTLDERKELQERAMDSNDLEKERGITILAKNTAVAYNDVRINIMDTPG HADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKALEQNLIPIVVVNKIDKPSARPAEVVDEVLELFIELGADDEQ LEFPVVYASAINGTSSLSDDPADQEHTMAPIFDTIIDHIPAPVDNSDEPLQFQVSLLDYNDFVGRIGIGRVFRGTVKVGD QVTLSKLDGTTKNFRVTKLFGFFGLERREIQEAKAGDLIAVSGMEDIFVGETITPTDCVEALPILRIDEPTLQMTFLVNN SPFAGREGKWITSRKVEERLLAELQTDVSLRVDPTDSPDKWTVSGRGELHLSILIETMRREGYELQVSRPEVIIKEIDGV KCEPFERVQIDTPEEYQGAIIQSLSERKGDMLDMQMVGNGQTRLIFLIPARGLIGYSTEFLSMTRGYGIMNHTFDQYLPV VQGEIGGRHRGALVSIENGKATTYSIMRIEERGTIFVNPGTEVYEGMIVGENSRDNDLGVNITTAKQMTNVRSATKDQTA VIKTPRILTLEESLEFLNDDEYMEVTPESIRLRKQILNKAARDKANKKKKSAE
Sequences:
>Translated_613_residues MTNLRNDIRNVAIIAHVDHGKTTLVDELLKQSHTLDERKELQERAMDSNDLEKERGITILAKNTAVAYNDVRINIMDTPG HADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKALEQNLIPIVVVNKIDKPSARPAEVVDEVLELFIELGADDEQ LEFPVVYASAINGTSSLSDDPADQEHTMAPIFDTIIDHIPAPVDNSDEPLQFQVSLLDYNDFVGRIGIGRVFRGTVKVGD QVTLSKLDGTTKNFRVTKLFGFFGLERREIQEAKAGDLIAVSGMEDIFVGETITPTDCVEALPILRIDEPTLQMTFLVNN SPFAGREGKWITSRKVEERLLAELQTDVSLRVDPTDSPDKWTVSGRGELHLSILIETMRREGYELQVSRPEVIIKEIDGV KCEPFERVQIDTPEEYQGAIIQSLSERKGDMLDMQMVGNGQTRLIFLIPARGLIGYSTEFLSMTRGYGIMNHTFDQYLPV VQGEIGGRHRGALVSIENGKATTYSIMRIEERGTIFVNPGTEVYEGMIVGENSRDNDLGVNITTAKQMTNVRSATKDQTA VIKTPRILTLEESLEFLNDDEYMEVTPESIRLRKQILNKAARDKANKKKKSAE >Mature_612_residues TNLRNDIRNVAIIAHVDHGKTTLVDELLKQSHTLDERKELQERAMDSNDLEKERGITILAKNTAVAYNDVRINIMDTPGH ADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKALEQNLIPIVVVNKIDKPSARPAEVVDEVLELFIELGADDEQL EFPVVYASAINGTSSLSDDPADQEHTMAPIFDTIIDHIPAPVDNSDEPLQFQVSLLDYNDFVGRIGIGRVFRGTVKVGDQ VTLSKLDGTTKNFRVTKLFGFFGLERREIQEAKAGDLIAVSGMEDIFVGETITPTDCVEALPILRIDEPTLQMTFLVNNS PFAGREGKWITSRKVEERLLAELQTDVSLRVDPTDSPDKWTVSGRGELHLSILIETMRREGYELQVSRPEVIIKEIDGVK CEPFERVQIDTPEEYQGAIIQSLSERKGDMLDMQMVGNGQTRLIFLIPARGLIGYSTEFLSMTRGYGIMNHTFDQYLPVV QGEIGGRHRGALVSIENGKATTYSIMRIEERGTIFVNPGTEVYEGMIVGENSRDNDLGVNITTAKQMTNVRSATKDQTAV IKTPRILTLEESLEFLNDDEYMEVTPESIRLRKQILNKAARDKANKKKKSAE
Specific function: Not known; probably interacts with the ribosomes in a GTP dependent manner [H]
COG id: COG1217
COG function: function code T; Predicted membrane GTPase involved in stress response
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. TypA subfamily [H]
Homologues:
Organism=Homo sapiens, GI157426893, Length=510, Percent_Identity=26.6666666666667, Blast_Score=139, Evalue=6e-33, Organism=Homo sapiens, GI94966754, Length=133, Percent_Identity=42.8571428571429, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI18390331, Length=145, Percent_Identity=39.3103448275862, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI4503483, Length=147, Percent_Identity=34.6938775510204, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI34147630, Length=275, Percent_Identity=32, Blast_Score=97, Evalue=5e-20, Organism=Homo sapiens, GI25306283, Length=168, Percent_Identity=35.1190476190476, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI19923640, Length=168, Percent_Identity=35.1190476190476, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI25306287, Length=168, Percent_Identity=35.1190476190476, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI217272894, Length=135, Percent_Identity=40, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI217272892, Length=135, Percent_Identity=40, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI310132016, Length=111, Percent_Identity=39.6396396396396, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI310110807, Length=111, Percent_Identity=39.6396396396396, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI310123363, Length=111, Percent_Identity=39.6396396396396, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI94966752, Length=129, Percent_Identity=32.5581395348837, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI53729339, Length=138, Percent_Identity=34.7826086956522, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI53729337, Length=138, Percent_Identity=34.7826086956522, Blast_Score=70, Evalue=7e-12, Organism=Escherichia coli, GI48994988, Length=603, Percent_Identity=55.7213930348259, Blast_Score=694, Evalue=0.0, Organism=Escherichia coli, GI1788922, Length=510, Percent_Identity=28.6274509803922, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1789738, Length=166, Percent_Identity=37.9518072289157, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1790835, Length=178, Percent_Identity=30.3370786516854, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1790412, Length=284, Percent_Identity=30.9859154929577, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1789737, Length=284, Percent_Identity=30.9859154929577, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1789559, Length=172, Percent_Identity=34.3023255813954, Blast_Score=66, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17557151, Length=517, Percent_Identity=26.8858800773694, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17556745, Length=446, Percent_Identity=25.3363228699552, Blast_Score=110, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17533571, Length=180, Percent_Identity=36.1111111111111, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71988811, Length=128, Percent_Identity=37.5, Blast_Score=102, Evalue=9e-22, Organism=Caenorhabditis elegans, GI71988819, Length=128, Percent_Identity=37.5, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17506493, Length=165, Percent_Identity=32.7272727272727, Blast_Score=99, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17552882, Length=134, Percent_Identity=38.0597014925373, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17556456, Length=299, Percent_Identity=29.7658862876254, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71994658, Length=156, Percent_Identity=36.5384615384615, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI25141371, Length=279, Percent_Identity=27.5985663082437, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17552884, Length=285, Percent_Identity=28.4210526315789, Blast_Score=67, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17569207, Length=285, Percent_Identity=28.4210526315789, Blast_Score=67, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323320, Length=508, Percent_Identity=29.1338582677165, Blast_Score=154, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6324707, Length=148, Percent_Identity=38.5135135135135, Blast_Score=109, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6320593, Length=148, Percent_Identity=38.5135135135135, Blast_Score=109, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6323098, Length=181, Percent_Identity=33.1491712707182, Blast_Score=100, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6324761, Length=273, Percent_Identity=30.7692307692308, Blast_Score=97, Evalue=9e-21, Organism=Saccharomyces cerevisiae, GI6324166, Length=149, Percent_Identity=37.5838926174497, Blast_Score=90, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6322359, Length=148, Percent_Identity=32.4324324324324, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322675, Length=147, Percent_Identity=29.2517006802721, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI78706572, Length=516, Percent_Identity=26.1627906976744, Blast_Score=129, Evalue=8e-30, Organism=Drosophila melanogaster, GI24582462, Length=201, Percent_Identity=34.3283582089552, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI21357743, Length=191, Percent_Identity=38.7434554973822, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI28574573, Length=140, Percent_Identity=40, Blast_Score=108, Evalue=2e-23, Organism=Drosophila melanogaster, GI281363316, Length=303, Percent_Identity=32.013201320132, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI17864358, Length=303, Percent_Identity=32.013201320132, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24585711, Length=153, Percent_Identity=35.9477124183007, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI24585713, Length=153, Percent_Identity=35.9477124183007, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI24585709, Length=157, Percent_Identity=35.031847133758, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI221458488, Length=162, Percent_Identity=37.037037037037, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI19921738, Length=276, Percent_Identity=28.2608695652174, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI28572034, Length=166, Percent_Identity=35.5421686746988, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI19922690, Length=286, Percent_Identity=25.8741258741259, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR005225 - InterPro: IPR000640 - InterPro: IPR004161 - InterPro: IPR009000 - InterPro: IPR006298 [H]
Pfam domain/function: PF00679 EFG_C; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: NA
Molecular weight: Translated: 68574; Mature: 68443
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLRNDIRNVAIIAHVDHGKTTLVDELLKQSHTLDERKELQERAMDSNDLEKERGITIL CCCHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHCCEEEE AKNTAVAYNDVRINIMDTPGHADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKAL EECCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHH EQNLIPIVVVNKIDKPSARPAEVVDEVLELFIELGADDEQLEFPVVYASAINGTSSLSDD HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCC PADQEHTMAPIFDTIIDHIPAPVDNSDEPLQFQVSLLDYNDFVGRIGIGRVFRGTVKVGD CCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCHHEECEEECCC QVTLSKLDGTTKNFRVTKLFGFFGLERREIQEAKAGDLIAVSGMEDIFVGETITPTDCVE EEEEEECCCCCCCEEEEEEHHHHCCCHHHHHHCCCCCEEEECCCCCEEECCCCCHHHHHH ALPILRIDEPTLQMTFLVNNSPFAGREGKWITSRKVEERLLAELQTDVSLRVDPTDSPDK HCCEEEECCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHCCCEEEECCCCCCCE WTVSGRGELHLSILIETMRREGYELQVSRPEVIIKEIDGVKCEPFERVQIDTPEEYQGAI EEECCCCCEEHHHHHHHHHCCCCEEEECCCHHHEECCCCCCCCCCCEEECCCCHHHHHHH IQSLSERKGDMLDMQMVGNGQTRLIFLIPARGLIGYSTEFLSMTRGYGIMNHTFDQYLPV HHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCHHCCHHHHHCH VQGEIGGRHRGALVSIENGKATTYSIMRIEERGTIFVNPGTEVYEGMIVGENSRDNDLGV HCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCEEEECCCHHHHCCEEEECCCCCCCCCE NITTAKQMTNVRSATKDQTAVIKTPRILTLEESLEFLNDDEYMEVTPESIRLRKQILNKA EEEHHHHHHHHHHCCCCCEEEEECCEEEEHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH ARDKANKKKKSAE HHHHHHHHHCCCC >Mature Secondary Structure TNLRNDIRNVAIIAHVDHGKTTLVDELLKQSHTLDERKELQERAMDSNDLEKERGITIL CCHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHCCEEEE AKNTAVAYNDVRINIMDTPGHADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKAL EECCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHH EQNLIPIVVVNKIDKPSARPAEVVDEVLELFIELGADDEQLEFPVVYASAINGTSSLSDD HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCC PADQEHTMAPIFDTIIDHIPAPVDNSDEPLQFQVSLLDYNDFVGRIGIGRVFRGTVKVGD CCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCHHEECEEECCC QVTLSKLDGTTKNFRVTKLFGFFGLERREIQEAKAGDLIAVSGMEDIFVGETITPTDCVE EEEEEECCCCCCCEEEEEEHHHHCCCHHHHHHCCCCCEEEECCCCCEEECCCCCHHHHHH ALPILRIDEPTLQMTFLVNNSPFAGREGKWITSRKVEERLLAELQTDVSLRVDPTDSPDK HCCEEEECCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHCCCEEEECCCCCCCE WTVSGRGELHLSILIETMRREGYELQVSRPEVIIKEIDGVKCEPFERVQIDTPEEYQGAI EEECCCCCEEHHHHHHHHHCCCCEEEECCCHHHEECCCCCCCCCCCEEECCCCHHHHHHH IQSLSERKGDMLDMQMVGNGQTRLIFLIPARGLIGYSTEFLSMTRGYGIMNHTFDQYLPV HHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCHHCCHHHHHCH VQGEIGGRHRGALVSIENGKATTYSIMRIEERGTIFVNPGTEVYEGMIVGENSRDNDLGV HCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCEEEECCCHHHHCCEEEECCCCCCCCCE NITTAKQMTNVRSATKDQTAVIKTPRILTLEESLEFLNDDEYMEVTPESIRLRKQILNKA EEEHHHHHHHHHHCCCCCEEEEECCEEEEHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH ARDKANKKKKSAE HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]