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The map label for this gene is yqaK [H]

Identifier: 15675383

GI number: 15675383

Start: 1215998

End: 1216987

Strand: Reverse

Name: yqaK [H]

Synonym: SPy_1477

Alternate gene names: 15675383

Gene position: 1216987-1215998 (Counterclockwise)

Preceding gene: 15675384

Following gene: 15675382

Centisome position: 65.7

GC content: 39.9

Gene sequence:

>990_bases
ATGACAAATCAATTAGCACAAAACAACCACAACAGCTTTTTTAAATCGCCAGCAGTAAAAAACAGGATTGAGCAGGTTGT
CGGCGCACGAGCCGAACAATTTACAACTAGCTTATTATCAATCATCAGCAATAATAACCTTCTAGCCAAAGCAACATCTG
AGTCAATTATGGGAGCGGCTATGAAAGCAGCAGTGCTTAATTTACCAATCGAGCCTAGTCTTGGTTTTGCTTACGTGGTG
CCGTACAACCGAAATTACAAGGATGGAAATCGTTGGATCACAGTAAACGAAGCGCAATTTCAAATCGGATATAGAGGACT
TATACAGCTAGCTCAAAGAAGTGGACAAGTCCGAAATATTGAACACGGAATCATATACGAAGAGGAATTCCTTGGTTATG
ACAAGATTAGAGGGCAGTTGAAGCTAACGGGCGACTACGTTGACTCTGGTGTTGTAAAAGGCTACTTTGCAAGTTTAGAA
CTAATCAGCGGCTTTTACAAGATGATTTTCTGGCCGAAAGAAAAAGTGTACGAACATGCCAAAAAGTATTCTAAAACTTT
TGATAAGAAAACAGGAGATTTTAAACCAGGAACGCCTTGGGCGACAGAATTTGATCCAATGGCTATCAAGACATTACTCA
AGGAATTACTGAGCAAGTATGCCCCTCTTTCTGTTGAAATGCAGGATGCTCTAGAAGCGGATAACGCAGATTCAACGATT
GTCATTCCAAAAGATGTCACACCACAAGAAACAAACAGCCTTGATGACTTAATCGGCACGCAGAACGAAAAAAAGGACGC
TCCTAGCAATTTAAAAGATGTAATTAAAGATTTACATTCAGAACCAGAAAAAACGCTCACAGACGAAAATAAGACGGTTT
TAGAAGACACCTCTTATCCAGCAGATGAGATTCCTGATTTTGACCAAGAAACAGGGGAAATTAAAGCTAGCGAAGGCAAC
TTATTTGATAACCTCGGAGACTTAATATGA

Upstream 100 bases:

>100_bases
AATTTATTGATGGCGAGGATGTTCCAGAGTTAACAAAAGAGCAAAAAGTTAAAAGTATGGTAAACGGAATGTTTGACGAA
ATTTTAAGAGGTAGTATCTA

Downstream 100 bases:

>100_bases
TTAAACTTGTAAAAATCGAAGGATATTATATTAATCCAGAATATGTTGTTGGCGTTTGGGAAAGATCTGCTTTAAATTTT
GACAATTTAGATGAAAAAGT

Product: putative recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTNQLAQNNHNSFFKSPAVKNRIEQVVGARAEQFTTSLLSIISNNNLLAKATSESIMGAAMKAAVLNLPIEPSLGFAYVV
PYNRNYKDGNRWITVNEAQFQIGYRGLIQLAQRSGQVRNIEHGIIYEEEFLGYDKIRGQLKLTGDYVDSGVVKGYFASLE
LISGFYKMIFWPKEKVYEHAKKYSKTFDKKTGDFKPGTPWATEFDPMAIKTLLKELLSKYAPLSVEMQDALEADNADSTI
VIPKDVTPQETNSLDDLIGTQNEKKDAPSNLKDVIKDLHSEPEKTLTDENKTVLEDTSYPADEIPDFDQETGEIKASEGN
LFDNLGDLI

Sequences:

>Translated_329_residues
MTNQLAQNNHNSFFKSPAVKNRIEQVVGARAEQFTTSLLSIISNNNLLAKATSESIMGAAMKAAVLNLPIEPSLGFAYVV
PYNRNYKDGNRWITVNEAQFQIGYRGLIQLAQRSGQVRNIEHGIIYEEEFLGYDKIRGQLKLTGDYVDSGVVKGYFASLE
LISGFYKMIFWPKEKVYEHAKKYSKTFDKKTGDFKPGTPWATEFDPMAIKTLLKELLSKYAPLSVEMQDALEADNADSTI
VIPKDVTPQETNSLDDLIGTQNEKKDAPSNLKDVIKDLHSEPEKTLTDENKTVLEDTSYPADEIPDFDQETGEIKASEGN
LFDNLGDLI
>Mature_328_residues
TNQLAQNNHNSFFKSPAVKNRIEQVVGARAEQFTTSLLSIISNNNLLAKATSESIMGAAMKAAVLNLPIEPSLGFAYVVP
YNRNYKDGNRWITVNEAQFQIGYRGLIQLAQRSGQVRNIEHGIIYEEEFLGYDKIRGQLKLTGDYVDSGVVKGYFASLEL
ISGFYKMIFWPKEKVYEHAKKYSKTFDKKTGDFKPGTPWATEFDPMAIKTLLKELLSKYAPLSVEMQDALEADNADSTIV
IPKDVTPQETNSLDDLIGTQNEKKDAPSNLKDVIKDLHSEPEKTLTDENKTVLEDTSYPADEIPDFDQETGEIKASEGNL
FDNLGDLI

Specific function: Binds To Single-Stranded DNA And Also Promotes The Renaturation Of Complementary Single-Stranded DNA. Function In Recombination. Has A Function Similar To That Of Lambda Redb. [C]

COG id: COG3723

COG function: function code L; Recombinational DNA repair protein (RecE pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787611, Length=244, Percent_Identity=28.2786885245902, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004590
- InterPro:   IPR018330 [H]

Pfam domain/function: PF03837 RecT [H]

EC number: NA

Molecular weight: Translated: 36851; Mature: 36720

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNQLAQNNHNSFFKSPAVKNRIEQVVGARAEQFTTSLLSIISNNNLLAKATSESIMGAA
CCCCCCCCCCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH
MKAAVLNLPIEPSLGFAYVVPYNRNYKDGNRWITVNEAQFQIGYRGLIQLAQRSGQVRNI
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCEEHHHHHHHHHHHHHCCCCCCC
EHGIIYEEEFLGYDKIRGQLKLTGDYVDSGVVKGYFASLELISGFYKMIFWPKEKVYEHA
CCCCEEHHHHCCHHHHCCEEEEECCHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KKYSKTFDKKTGDFKPGTPWATEFDPMAIKTLLKELLSKYAPLSVEMQDALEADNADSTI
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCEE
VIPKDVTPQETNSLDDLIGTQNEKKDAPSNLKDVIKDLHSEPEKTLTDENKTVLEDTSYP
EECCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCC
ADEIPDFDQETGEIKASEGNLFDNLGDLI
HHCCCCCCCCCCCEECCCCCHHHHHHHCC
>Mature Secondary Structure 
TNQLAQNNHNSFFKSPAVKNRIEQVVGARAEQFTTSLLSIISNNNLLAKATSESIMGAA
CCCCCCCCCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH
MKAAVLNLPIEPSLGFAYVVPYNRNYKDGNRWITVNEAQFQIGYRGLIQLAQRSGQVRNI
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCEEHHHHHHHHHHHHHCCCCCCC
EHGIIYEEEFLGYDKIRGQLKLTGDYVDSGVVKGYFASLELISGFYKMIFWPKEKVYEHA
CCCCEEHHHHCCHHHHCCEEEEECCHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KKYSKTFDKKTGDFKPGTPWATEFDPMAIKTLLKELLSKYAPLSVEMQDALEADNADSTI
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCEE
VIPKDVTPQETNSLDDLIGTQNEKKDAPSNLKDVIKDLHSEPEKTLTDENKTVLEDTSYP
EECCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCC
ADEIPDFDQETGEIKASEGNLFDNLGDLI
HHCCCCCCCCCCCEECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]