Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is yrxA [H]
Identifier: 15675342
GI number: 15675342
Start: 1184124
End: 1184645
Strand: Reverse
Name: yrxA [H]
Synonym: SPy_1427
Alternate gene names: 15675342
Gene position: 1184645-1184124 (Counterclockwise)
Preceding gene: 15675343
Following gene: 15675341
Centisome position: 63.95
GC content: 34.48
Gene sequence:
>522_bases ATGAAAGCAGAAGATCGTCGTCAAAAAATTATTGAGTGCTTAAATAGTGAACAAAAAGCTGTATCTGCTACTCGTTTAGG TAAGTTATTAGGAGTGAGTCGCCAAGTAATCGTTGGAGATATAGCTCTTCTTCGAGCTCAGCAGATTGATATTATTTCGA CTCCAAAAGGTTATATTATGTCAACAGCACTTTATAGTCACCAATTTTGTGCACGTATTGTGTGCCAACATAATGTAGAA GAAACTAAAAAAGAATTAGAAATTATTTTAGCTCATCAAGGGATTATTACGACGGTAGAGGTAGAACATCCTATTTACGG TATGATAACAGCCCCTTTAAATATTAAGACACACTCTGATGTAACTAATTTCATGTCCAAACTCAGTCAATCTAAAGCAG AGTTATTGTCTTCGTTGACAGAAGGACTACATAGTCACTTAATTTCGTGTCCTAGTCAAGAAGCCTTTTTAGCTATTAAG CATGATTTAGAATTAGCAGGTATCTTATACAAAGGAATATAA
Upstream 100 bases:
>100_bases AACCAGACTTTGGTCTGGTTTTTTGGTTCTATATCCTAAGAAGAAAGAAAACCCTGCTTAAAAATATGATATGATAGAAA TAAAAAAGGATAGATAGATT
Downstream 100 bases:
>100_bases CTATAGTATATTATGCCATTGATGGTTGTTATGAATACCATGCTAAAATATTCTATTGATTATTTATCAGCAACAAGGTA TCGTTTAAAAATACCAAAAG
Product: putative transcriptional regulator
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MKAEDRRQKIIECLNSEQKAVSATRLGKLLGVSRQVIVGDIALLRAQQIDIISTPKGYIMSTALYSHQFCARIVCQHNVE ETKKELEIILAHQGIITTVEVEHPIYGMITAPLNIKTHSDVTNFMSKLSQSKAELLSSLTEGLHSHLISCPSQEAFLAIK HDLELAGILYKGI
Sequences:
>Translated_173_residues MKAEDRRQKIIECLNSEQKAVSATRLGKLLGVSRQVIVGDIALLRAQQIDIISTPKGYIMSTALYSHQFCARIVCQHNVE ETKKELEIILAHQGIITTVEVEHPIYGMITAPLNIKTHSDVTNFMSKLSQSKAELLSSLTEGLHSHLISCPSQEAFLAIK HDLELAGILYKGI >Mature_173_residues MKAEDRRQKIIECLNSEQKAVSATRLGKLLGVSRQVIVGDIALLRAQQIDIISTPKGYIMSTALYSHQFCARIVCQHNVE ETKKELEIILAHQGIITTVEVEHPIYGMITAPLNIKTHSDVTNFMSKLSQSKAELLSSLTEGLHSHLISCPSQEAFLAIK HDLELAGILYKGI
Specific function: Unknown
COG id: COG1827
COG function: function code R; Predicted small molecule binding protein (contains 3H domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004173 - InterPro: IPR013196 - InterPro: IPR011991 - ProDom: PD469575 [H]
Pfam domain/function: PF02829 3H; PF08279 HTH_11 [H]
EC number: NA
Molecular weight: Translated: 19176; Mature: 19176
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAEDRRQKIIECLNSEQKAVSATRLGKLLGVSRQVIVGDIALLRAQQIDIISTPKGYIM CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCHHH STALYSHQFCARIVCQHNVEETKKELEIILAHQGIITTVEVEHPIYGMITAPLNIKTHSD HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCEECCCHHH VTNFMSKLSQSKAELLSSLTEGLHSHLISCPSQEAFLAIKHDLELAGILYKGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHCCC >Mature Secondary Structure MKAEDRRQKIIECLNSEQKAVSATRLGKLLGVSRQVIVGDIALLRAQQIDIISTPKGYIM CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCHHH STALYSHQFCARIVCQHNVEETKKELEIILAHQGIITTVEVEHPIYGMITAPLNIKTHSD HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCEECCCHHH VTNFMSKLSQSKAELLSSLTEGLHSHLISCPSQEAFLAIKHDLELAGILYKGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8444804; 9384377 [H]