Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is clcB [H]
Identifier: 15675309
GI number: 15675309
Start: 1145335
End: 1146648
Strand: Direct
Name: clcB [H]
Synonym: SPy_1379
Alternate gene names: 15675309
Gene position: 1145335-1146648 (Clockwise)
Preceding gene: 15675308
Following gene: 15675321
Centisome position: 61.83
GC content: 41.4
Gene sequence:
>1314_bases ATGACGATTATAATTATGGACTCTAATAGTGCTCACGAGACTGATAATCTATCAGTCTCTTTTCTTAACTTTTGTTATAA TAGTCTTATGAAACGACACTTTTTACTCTTGACCTTTTACCTCTTTTTAACAGGTTTAACAGCTGGCCTTGTTGCTTTTA TCTTAACAAAAGCCATTCACCTGATTCAGTCCCTCAGTTTTGGATTCAGTCAAGGTTCTTTTAGCACTATGATTGCTAGT GTTCCACCACAAAGACGAGCTCTTTCACTCCTCTTTGCTGGACTTCTTGCAGGTCTTGGGTGGCACCTATTGGCTAAAAA AGGAAAGGACATTCAATCTATTCAGCAAATCATTCAAGATGACATCTCATTTAGTCCCTGGACACAGTTTTGGCATGGTT GGCTCCAATTAACGACCGTATCTATGGGAGCTCCTGTCGGCCGAGAAGGAGCTTCACGGGAAGTCGCTGTTACCTTGACG TCTCTTTGGAGCCAAAGATGCAACTTGTCAAAAGCCGATCAAAAACTTTTATTAGCCTGCGCTTCTGGCGCTGCCCTTGG TGCTGTCTACAATGCTCCCTTAGCCACTATTTTATTTATCTTAGAAGCTATTCTTAACCGTTGGTCCCTTAAAAATATAT ACGCTGCCTGCCTAACGAGCTATGTGGCTGTGGAAACAGTTGCTTTATTACAAGGCCGACATGAGATTCAATACCTAATG CCTCAGCAACATTGGACGCTAGGAACCCTTATTGGGTCCGTCCTGGCTGGTCTTATCCTTTCCCTCTTTGCTCACGCTTA CAAACATCTTTTGAAACACCTTCCTAAGGCTGATGCCAAAAGTCAGTGGTTTATTCCGAAAGTTCTCATCGCTTTTAGCC TTATCGCAGGACTCAGCATTTTCTTCCCAGAGATTTTAGGAAATGGCAAAGCTGGATTACTCTTTTTTCTCCATGAAGAA CCACATCTGAGCTATATTAGCTGGCTACTTGTTGCCAAAGCTGTCGCTATCTCTTTAGTTTTTGCTTCTGGAGCAAAAGG GGGTAAAATTGCTCCTTCTATGATGCTTGGAGGTGCTAGTGGCTTACTACTAGCTATCCTTAGTCAGTACCTTATTCCCT TGTCTCTATCAAATACGTTAGCCATTATGGTTGGTGCAACAATCTTTTTAGGTGTGATCAATAAGATACCCTTGGCGGCA CCAGTTTTTCTGGTTGAAATTACAGGCCAATCGTTACTAATGATTATCCCTTTAGCATTAGCTAACCTCATTTTTTATTT TAGCTATCAGTTTTATCGTTTCATCCTTAAATGA
Upstream 100 bases:
>100_bases CCAATTGTTATGAATGGTATTTCAACAGGAACATCAAACCATGACTTTTTCTCACAGGTAGGGAATGGCTATCTTCTTGG TTCTGTAGAAGCTATGTCTG
Downstream 100 bases:
>100_bases TTAGTTAATTACTTTTTTAATAAAAAGCTTCGGATGAATGAACTGCACCCCAAAAGTTGGACATTATATTTTAAGCAAAG TTGGACTTGGTATAATAAAG
Product: putative chloride channel protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MTIIIMDSNSAHETDNLSVSFLNFCYNSLMKRHFLLLTFYLFLTGLTAGLVAFILTKAIHLIQSLSFGFSQGSFSTMIAS VPPQRRALSLLFAGLLAGLGWHLLAKKGKDIQSIQQIIQDDISFSPWTQFWHGWLQLTTVSMGAPVGREGASREVAVTLT SLWSQRCNLSKADQKLLLACASGAALGAVYNAPLATILFILEAILNRWSLKNIYAACLTSYVAVETVALLQGRHEIQYLM PQQHWTLGTLIGSVLAGLILSLFAHAYKHLLKHLPKADAKSQWFIPKVLIAFSLIAGLSIFFPEILGNGKAGLLFFLHEE PHLSYISWLLVAKAVAISLVFASGAKGGKIAPSMMLGGASGLLLAILSQYLIPLSLSNTLAIMVGATIFLGVINKIPLAA PVFLVEITGQSLLMIIPLALANLIFYFSYQFYRFILK
Sequences:
>Translated_437_residues MTIIIMDSNSAHETDNLSVSFLNFCYNSLMKRHFLLLTFYLFLTGLTAGLVAFILTKAIHLIQSLSFGFSQGSFSTMIAS VPPQRRALSLLFAGLLAGLGWHLLAKKGKDIQSIQQIIQDDISFSPWTQFWHGWLQLTTVSMGAPVGREGASREVAVTLT SLWSQRCNLSKADQKLLLACASGAALGAVYNAPLATILFILEAILNRWSLKNIYAACLTSYVAVETVALLQGRHEIQYLM PQQHWTLGTLIGSVLAGLILSLFAHAYKHLLKHLPKADAKSQWFIPKVLIAFSLIAGLSIFFPEILGNGKAGLLFFLHEE PHLSYISWLLVAKAVAISLVFASGAKGGKIAPSMMLGGASGLLLAILSQYLIPLSLSNTLAIMVGATIFLGVINKIPLAA PVFLVEITGQSLLMIIPLALANLIFYFSYQFYRFILK >Mature_436_residues TIIIMDSNSAHETDNLSVSFLNFCYNSLMKRHFLLLTFYLFLTGLTAGLVAFILTKAIHLIQSLSFGFSQGSFSTMIASV PPQRRALSLLFAGLLAGLGWHLLAKKGKDIQSIQQIIQDDISFSPWTQFWHGWLQLTTVSMGAPVGREGASREVAVTLTS LWSQRCNLSKADQKLLLACASGAALGAVYNAPLATILFILEAILNRWSLKNIYAACLTSYVAVETVALLQGRHEIQYLMP QQHWTLGTLIGSVLAGLILSLFAHAYKHLLKHLPKADAKSQWFIPKVLIAFSLIAGLSIFFPEILGNGKAGLLFFLHEEP HLSYISWLLVAKAVAISLVFASGAKGGKIAPSMMLGGASGLLLAILSQYLIPLSLSNTLAIMVGATIFLGVINKIPLAAP VFLVEITGQSLLMIIPLALANLIFYFSYQFYRFILK
Specific function: Probably acts as an electrical shunt for an outwardly- directed proton pump that is linked to amino acid decarboxylation, as part of the extreme acid resistance (XAR) response [H]
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 47718; Mature: 47587
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIIMDSNSAHETDNLSVSFLNFCYNSLMKRHFLLLTFYLFLTGLTAGLVAFILTKAIH CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIQSLSFGFSQGSFSTMIASVPPQRRALSLLFAGLLAGLGWHLLAKKGKDIQSIQQIIQD HHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH DISFSPWTQFWHGWLQLTTVSMGAPVGREGASREVAVTLTSLWSQRCNLSKADQKLLLAC CCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH ASGAALGAVYNAPLATILFILEAILNRWSLKNIYAACLTSYVAVETVALLQGRHEIQYLM HCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC PQQHWTLGTLIGSVLAGLILSLFAHAYKHLLKHLPKADAKSQWFIPKVLIAFSLIAGLSI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH FFPEILGNGKAGLLFFLHEEPHLSYISWLLVAKAVAISLVFASGAKGGKIAPSMMLGGAS HHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCH GLLLAILSQYLIPLSLSNTLAIMVGATIFLGVINKIPLAAPVFLVEITGQSLLMIIPLAL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHH ANLIFYFSYQFYRFILK HHHHHHHHHHHHHHHHC >Mature Secondary Structure TIIIMDSNSAHETDNLSVSFLNFCYNSLMKRHFLLLTFYLFLTGLTAGLVAFILTKAIH EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIQSLSFGFSQGSFSTMIASVPPQRRALSLLFAGLLAGLGWHLLAKKGKDIQSIQQIIQD HHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH DISFSPWTQFWHGWLQLTTVSMGAPVGREGASREVAVTLTSLWSQRCNLSKADQKLLLAC CCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH ASGAALGAVYNAPLATILFILEAILNRWSLKNIYAACLTSYVAVETVALLQGRHEIQYLM HCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC PQQHWTLGTLIGSVLAGLILSLFAHAYKHLLKHLPKADAKSQWFIPKVLIAFSLIAGLSI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH FFPEILGNGKAGLLFFLHEEPHLSYISWLLVAKAVAISLVFASGAKGGKIAPSMMLGGAS HHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCH GLLLAILSQYLIPLSLSNTLAIMVGATIFLGVINKIPLAAPVFLVEITGQSLLMIIPLAL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHH ANLIFYFSYQFYRFILK HHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA