Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is dnaX [H]
Identifier: 15675296
GI number: 15675296
Start: 1130859
End: 1132529
Strand: Reverse
Name: dnaX [H]
Synonym: SPy_1364
Alternate gene names: 15675296
Gene position: 1132529-1130859 (Counterclockwise)
Preceding gene: 15675297
Following gene: 15675295
Centisome position: 61.14
GC content: 40.57
Gene sequence:
>1671_bases ATGTATCAAGCTCTTTATCGGAAATACCGGAGCCAAACGTTTGACGAAATGGTGGGACAATCGGTTATTTCCACAACTTT AAAGCAGGCAGTTGAATCTGGCAAGATTAGCCATGCTTATCTTTTTTCAGGTCCTAGAGGGACTGGGAAAACAAGTGCGG CAAAGATTTTTGCAAAGGCCATGAATTGTCCTAACCAAGTCGATGGTGAACCCTGTAATCAATGCGATATTTGCCGAGAT ATCACGAATGGAAGCTTGGAAGATGTGATTGAAATTGATGCTGCCTCGAATAATGGTGTTGATGAAATTCGTGACATTCG AGACAAATCAACCTATGCGCCAAGTCGTGCGACTTACAAGGTTTATATTATTGATGAGGTTCACATGTTATCAACAGGGG CTTTTAATGCGCTTTTGAAAACTTTGGAAGAACCGACAGAAAATGTTGTCTTTATCTTGGCAACAACGGAATTGCATAAA ATTCCAGCCACTATTTTATCTCGTGTGCAACGCTTTGAATTCAAAGCTATTAAGCAAAAAGCTATTCGAGAGCATTTAGC CTGGGTTTTGGACAAAGAAGGTATTGCCTATGAGGTGGATGCTTTAAATCTCATTGCAAGGCGAGCAGAAGGAGGCATGC GTGATGCTTTATCTATTTTAGATCAGGCTTTGAGCTTGTCACCAGATAATCAGGTCGCCATTGCAATTGCCGAAGAAATT ACAGGTTCTATTTCCATACTTGCTCTGGGTGACTATGTTCGATATGTCTCCCAAGAACAGGCTACGCAAGCTCTGGCAGC CTTAGAGACCATTTATGATAGTGGGAAGAGCATGAGCCGCTTTGCGACAGATTTATTGACCTATCTGCGTGATTTATTGG TGGTTAAAGCTGGCGGCGACAATCAACGTCAGTCAGCTGTTTTTGATACCAATTTGTCTCTCTCGATAGATCGTATATTC CAAATGATAACAGTTGTTACTAGTCATCTCCCTGAAATCAAAAAGGGAACCCATCCTCGGATTTATGCCGAAATGATGAC TATCCAATTAGCTCAGAAAGAGCAGATTTTGTCCCAAGTAAACTTGTCAGGAGAGTTAATCTCAGAGATTGAAACGCTCA AAAATGAGTTGGCACAACTTAAACAACAATTGTCGCAGCTCCAATCGCGTCCTGATTCACTGGCAAGATCTGATAAAACG AAACCTAAAACCACAAGCTACAGGGTTGATCGGGTTACCATTTTGAAAATCATGGAAGAAACGGTTCGAAATAGCCAACA ATCTCGACAATATCTAGATGCTCTAAAAAATGCTTGGAATGAAATTCTAGATAACATTTCTGCCCAAGACAGAGCCTTAT TGATGGGCTCTGAGCCTGTCTTAGCAAATAGTGAGAATGCGATTTTGGCTTTCGAGGCTGCCTTTAATGCAGAACAAGTC ATGAGCCGAAATAATCTTAATGATATGTTTGGTAACATTATGAGTAAAGCTGCTGGTTTTTCTCCCAATATTCTGGCAGT ACCAAGGACAGATTTTCAGCATATTCGTAAGGAATTTGCTCAGCAAATGAAATCGCAAAAAGACAGTGTTCAAGAAGAAC AAGAAGTAGCGCTTGATATTCCAGAAGGGTTTGATTTTTTGCTCGATAAAATAAATACTATTGACGACTAA
Upstream 100 bases:
>100_bases CTGATTATGATGAGGTTGATCAAGAATACTTAGAGGCCTTTGTGGATCTATTTCTTGAAAAGACCACGTTTACCTTTAAC ATGTTTGGAGTTAAAAACTG
Downstream 100 bases:
>100_bases AACTGAAATACATAAGGGTAAGGTTTTGCCCTTACCCACGTTTTATCTCGTTACTTTTCTTCATAGTACAGTATTTTTTT GTTATAATAAAGCTATGACT
Product: DNA polymerase III subunits gamma and tau
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MYQALYRKYRSQTFDEMVGQSVISTTLKQAVESGKISHAYLFSGPRGTGKTSAAKIFAKAMNCPNQVDGEPCNQCDICRD ITNGSLEDVIEIDAASNNGVDEIRDIRDKSTYAPSRATYKVYIIDEVHMLSTGAFNALLKTLEEPTENVVFILATTELHK IPATILSRVQRFEFKAIKQKAIREHLAWVLDKEGIAYEVDALNLIARRAEGGMRDALSILDQALSLSPDNQVAIAIAEEI TGSISILALGDYVRYVSQEQATQALAALETIYDSGKSMSRFATDLLTYLRDLLVVKAGGDNQRQSAVFDTNLSLSIDRIF QMITVVTSHLPEIKKGTHPRIYAEMMTIQLAQKEQILSQVNLSGELISEIETLKNELAQLKQQLSQLQSRPDSLARSDKT KPKTTSYRVDRVTILKIMEETVRNSQQSRQYLDALKNAWNEILDNISAQDRALLMGSEPVLANSENAILAFEAAFNAEQV MSRNNLNDMFGNIMSKAAGFSPNILAVPRTDFQHIRKEFAQQMKSQKDSVQEEQEVALDIPEGFDFLLDKINTIDD
Sequences:
>Translated_556_residues MYQALYRKYRSQTFDEMVGQSVISTTLKQAVESGKISHAYLFSGPRGTGKTSAAKIFAKAMNCPNQVDGEPCNQCDICRD ITNGSLEDVIEIDAASNNGVDEIRDIRDKSTYAPSRATYKVYIIDEVHMLSTGAFNALLKTLEEPTENVVFILATTELHK IPATILSRVQRFEFKAIKQKAIREHLAWVLDKEGIAYEVDALNLIARRAEGGMRDALSILDQALSLSPDNQVAIAIAEEI TGSISILALGDYVRYVSQEQATQALAALETIYDSGKSMSRFATDLLTYLRDLLVVKAGGDNQRQSAVFDTNLSLSIDRIF QMITVVTSHLPEIKKGTHPRIYAEMMTIQLAQKEQILSQVNLSGELISEIETLKNELAQLKQQLSQLQSRPDSLARSDKT KPKTTSYRVDRVTILKIMEETVRNSQQSRQYLDALKNAWNEILDNISAQDRALLMGSEPVLANSENAILAFEAAFNAEQV MSRNNLNDMFGNIMSKAAGFSPNILAVPRTDFQHIRKEFAQQMKSQKDSVQEEQEVALDIPEGFDFLLDKINTIDD >Mature_556_residues MYQALYRKYRSQTFDEMVGQSVISTTLKQAVESGKISHAYLFSGPRGTGKTSAAKIFAKAMNCPNQVDGEPCNQCDICRD ITNGSLEDVIEIDAASNNGVDEIRDIRDKSTYAPSRATYKVYIIDEVHMLSTGAFNALLKTLEEPTENVVFILATTELHK IPATILSRVQRFEFKAIKQKAIREHLAWVLDKEGIAYEVDALNLIARRAEGGMRDALSILDQALSLSPDNQVAIAIAEEI TGSISILALGDYVRYVSQEQATQALAALETIYDSGKSMSRFATDLLTYLRDLLVVKAGGDNQRQSAVFDTNLSLSIDRIF QMITVVTSHLPEIKKGTHPRIYAEMMTIQLAQKEQILSQVNLSGELISEIETLKNELAQLKQQLSQLQSRPDSLARSDKT KPKTTSYRVDRVTILKIMEETVRNSQQSRQYLDALKNAWNEILDNISAQDRALLMGSEPVLANSENAILAFEAAFNAEQV MSRNNLNDMFGNIMSKAAGFSPNILAVPRTDFQHIRKEFAQQMKSQKDSVQEEQEVALDIPEGFDFLLDKINTIDD
Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria [H]
COG id: COG2812
COG function: function code L; DNA polymerase III, gamma/tau subunits
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI6677723, Length=215, Percent_Identity=29.7674418604651, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI194306571, Length=218, Percent_Identity=29.3577981651376, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI194306567, Length=218, Percent_Identity=29.3577981651376, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI4506491, Length=336, Percent_Identity=24.1071428571429, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI31881687, Length=336, Percent_Identity=24.1071428571429, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI31563534, Length=224, Percent_Identity=28.125, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1786676, Length=243, Percent_Identity=51.8518518518518, Blast_Score=260, Evalue=2e-70, Organism=Caenorhabditis elegans, GI71986063, Length=298, Percent_Identity=25.1677852348993, Blast_Score=93, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17554730, Length=230, Percent_Identity=27.3913043478261, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17541988, Length=218, Percent_Identity=27.9816513761468, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6324039, Length=225, Percent_Identity=32, Blast_Score=106, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6322528, Length=302, Percent_Identity=22.8476821192053, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6324478, Length=222, Percent_Identity=25.2252252252252, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI18859927, Length=291, Percent_Identity=26.8041237113402, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI19921076, Length=215, Percent_Identity=27.4418604651163, Blast_Score=86, Evalue=9e-17, Organism=Drosophila melanogaster, GI17647857, Length=216, Percent_Identity=25.9259259259259, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR001270 - InterPro: IPR008921 - InterPro: IPR022754 - InterPro: IPR012763 [H]
Pfam domain/function: PF00004 AAA; PF12169 DNA_pol3_gamma3 [H]
EC number: =2.7.7.7 [H]
Molecular weight: Translated: 62054; Mature: 62054
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQALYRKYRSQTFDEMVGQSVISTTLKQAVESGKISHAYLFSGPRGTGKTSAAKIFAKA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHH MNCPNQVDGEPCNQCDICRDITNGSLEDVIEIDAASNNGVDEIRDIRDKSTYAPSRATYK HCCCCCCCCCCCCHHHHHHHHCCCCHHHHEEEECCCCCCHHHHHHHHHCCCCCCCCCEEE VYIIDEVHMLSTGAFNALLKTLEEPTENVVFILATTELHKIPATILSRVQRFEFKAIKQK EEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH AIREHLAWVLDKEGIAYEVDALNLIARRAEGGMRDALSILDQALSLSPDNQVAIAIAEEI HHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHH TGSISILALGDYVRYVSQEQATQALAALETIYDSGKSMSRFATDLLTYLRDLLVVKAGGD CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCC NQRQSAVFDTNLSLSIDRIFQMITVVTSHLPEIKKGTHPRIYAEMMTIQLAQKEQILSQV CCCCCCEECCCCCEEHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH NLSGELISEIETLKNELAQLKQQLSQLQSRPDSLARSDKTKPKTTSYRVDRVTILKIMEE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEHHHHHHHHHHHH TVRNSQQSRQYLDALKNAWNEILDNISAQDRALLMGSEPVLANSENAILAFEAAFNAEQV HHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCCEEEEECCCCHHHH MSRNNLNDMFGNIMSKAAGFSPNILAVPRTDFQHIRKEFAQQMKSQKDSVQEEQEVALDI HHHCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC PEGFDFLLDKINTIDD CCCHHHHHHHHHCCCC >Mature Secondary Structure MYQALYRKYRSQTFDEMVGQSVISTTLKQAVESGKISHAYLFSGPRGTGKTSAAKIFAKA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHH MNCPNQVDGEPCNQCDICRDITNGSLEDVIEIDAASNNGVDEIRDIRDKSTYAPSRATYK HCCCCCCCCCCCCHHHHHHHHCCCCHHHHEEEECCCCCCHHHHHHHHHCCCCCCCCCEEE VYIIDEVHMLSTGAFNALLKTLEEPTENVVFILATTELHKIPATILSRVQRFEFKAIKQK EEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH AIREHLAWVLDKEGIAYEVDALNLIARRAEGGMRDALSILDQALSLSPDNQVAIAIAEEI HHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHH TGSISILALGDYVRYVSQEQATQALAALETIYDSGKSMSRFATDLLTYLRDLLVVKAGGD CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCC NQRQSAVFDTNLSLSIDRIFQMITVVTSHLPEIKKGTHPRIYAEMMTIQLAQKEQILSQV CCCCCCEECCCCCEEHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH NLSGELISEIETLKNELAQLKQQLSQLQSRPDSLARSDKTKPKTTSYRVDRVTILKIMEE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEHHHHHHHHHHHH TVRNSQQSRQYLDALKNAWNEILDNISAQDRALLMGSEPVLANSENAILAFEAAFNAEQV HHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCCEEEEECCCCHHHH MSRNNLNDMFGNIMSKAAGFSPNILAVPRTDFQHIRKEFAQQMKSQKDSVQEEQEVALDI HHHCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC PEGFDFLLDKINTIDD CCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2124672; 7584024; 9384377; 2452406; 2468993; 1698458 [H]