Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is exuR [H]
Identifier: 15675250
GI number: 15675250
Start: 1075601
End: 1076401
Strand: Direct
Name: exuR [H]
Synonym: SPy_1297
Alternate gene names: 15675250
Gene position: 1075601-1076401 (Clockwise)
Preceding gene: 15675249
Following gene: 15675263
Centisome position: 58.06
GC content: 39.08
Gene sequence:
>801_bases ATGATGACATCTAAAATTACCATTAAAGATATTGCACGAGAAGCCGGGGTTTCTGTGGCGACCGTATCTTACGTGTTAAA CCAGCGCAATGATCAAAAAATCAGCGAAGAAACCCGCAATAAAGTGCTACATATTAGTAACCTTCTTAACTATACACCTA ATCAGGCAGCCAGGTCATTAGTCACACAACAATCAAACAGTGTTGTCCTGTATTACAAATATGCAGATAGCATTTTAGCT AGGGCTGAACAACTGCATACCATTAGCTTTCTATCCCGCCTATTGCATGAGCAGGACTATCAGCTGGTTTGCCTAAATGA AGATAGCACTGAAAAATTTGACTGGGCAGACCTTATTCTGACCTTGGACGTTGATAATGATACCTTTTACAAAATTGGAA AGCTTAATTTCAAACCCTTAATTGCCATTGATAGCTTTGTTAATGATCCCCTCTTCTTTCAAATTAATACAGATTATGCT GCTCTCAAAGATCAGGCTAATCAGTTTTTTAAGGATGAACCTTATACCCTGCTTTCCTTGCCTATCACTAATCGTGAGCG ATATGAGCATGTTTCTGCCTTCTTTCCAAGTTTGCACATTGTAAACGACCTAAGAGAGCTAACCTACTTTGAAAAGGAAA ATCTTTTACTCATTGATGAGAGTTTGGATCAATTCTTTGTGAACTCTTCGCAAAAACTCTACTGCCCACGTTTTTCCCCC AAAAAAGGGCAAGTTATCTTAGAGGCCATCGAATGGGCCAAAAAACGCCAGCCTGATAAAAAACATAACCTTCTGGTGTA A
Upstream 100 bases:
>100_bases TAAGGCCGTAGATAATCATATTAGTCCTCACATTTATCTTCAGATCAGCCAAATGTATTAATGATTCCTTGACTTTTACC ATGAATTCGGATATAACAAA
Downstream 100 bases:
>100_bases CGCCTGAGAATTAACCTATCTTGACTAATTCCTTGTAACTCAAAACCTTGCCTCTTTAGATAAAGAAGCAAGGTTTTTTG ATGTCTAATCTAATAACAGG
Product: LacI family transcriptional regulator
Products: NA
Alternate protein names: Probable galacturonate locus repressor [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MMTSKITIKDIAREAGVSVATVSYVLNQRNDQKISEETRNKVLHISNLLNYTPNQAARSLVTQQSNSVVLYYKYADSILA RAEQLHTISFLSRLLHEQDYQLVCLNEDSTEKFDWADLILTLDVDNDTFYKIGKLNFKPLIAIDSFVNDPLFFQINTDYA ALKDQANQFFKDEPYTLLSLPITNRERYEHVSAFFPSLHIVNDLRELTYFEKENLLLIDESLDQFFVNSSQKLYCPRFSP KKGQVILEAIEWAKKRQPDKKHNLLV
Sequences:
>Translated_266_residues MMTSKITIKDIAREAGVSVATVSYVLNQRNDQKISEETRNKVLHISNLLNYTPNQAARSLVTQQSNSVVLYYKYADSILA RAEQLHTISFLSRLLHEQDYQLVCLNEDSTEKFDWADLILTLDVDNDTFYKIGKLNFKPLIAIDSFVNDPLFFQINTDYA ALKDQANQFFKDEPYTLLSLPITNRERYEHVSAFFPSLHIVNDLRELTYFEKENLLLIDESLDQFFVNSSQKLYCPRFSP KKGQVILEAIEWAKKRQPDKKHNLLV >Mature_266_residues MMTSKITIKDIAREAGVSVATVSYVLNQRNDQKISEETRNKVLHISNLLNYTPNQAARSLVTQQSNSVVLYYKYADSILA RAEQLHTISFLSRLLHEQDYQLVCLNEDSTEKFDWADLILTLDVDNDTFYKIGKLNFKPLIAIDSFVNDPLFFQINTDYA ALKDQANQFFKDEPYTLLSLPITNRERYEHVSAFFPSLHIVNDLRELTYFEKENLLLIDESLDQFFVNSSQKLYCPRFSP KKGQVILEAIEWAKKRQPDKKHNLLV
Specific function: Transcriptional repressor for the exu locus which is required for galacturonate utilization (Probable) [H]
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 30926; Mature: 30926
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTSKITIKDIAREAGVSVATVSYVLNQRNDQKISEETRNKVLHISNLLNYTPNQAARSL CCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHEEHHHHHHCCCCCHHHHHH VTQQSNSVVLYYKYADSILARAEQLHTISFLSRLLHEQDYQLVCLNEDSTEKFDWADLIL HHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEE TLDVDNDTFYKIGKLNFKPLIAIDSFVNDPLFFQINTDYAALKDQANQFFKDEPYTLLSL EEECCCCCEEEEECCCCCEEEEEHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEE PITNRERYEHVSAFFPSLHIVNDLRELTYFEKENLLLIDESLDQFFVNSSQKLYCPRFSP CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCEEECCCCCC KKGQVILEAIEWAKKRQPDKKHNLLV CCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MMTSKITIKDIAREAGVSVATVSYVLNQRNDQKISEETRNKVLHISNLLNYTPNQAARSL CCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHEEHHHHHHCCCCCHHHHHH VTQQSNSVVLYYKYADSILARAEQLHTISFLSRLLHEQDYQLVCLNEDSTEKFDWADLIL HHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEE TLDVDNDTFYKIGKLNFKPLIAIDSFVNDPLFFQINTDYAALKDQANQFFKDEPYTLLSL EEECCCCCEEEEECCCCCEEEEEHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEE PITNRERYEHVSAFFPSLHIVNDLRELTYFEKENLLLIDESLDQFFVNSSQKLYCPRFSP CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCEEECCCCCC KKGQVILEAIEWAKKRQPDKKHNLLV CCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]