Click here to switch to the map view.

The map label for this gene is 15675220

Identifier: 15675220

GI number: 15675220

Start: 1041557

End: 1041757

Strand: Reverse

Name: 15675220

Synonym: SPy_1261

Alternate gene names: NA

Gene position: 1041757-1041557 (Counterclockwise)

Preceding gene: 15675221

Following gene: 15675219

Centisome position: 56.24

GC content: 31.34

Gene sequence:

>201_bases
GTGTCAGATGAAAAATATAATGCGAAATTAGATCAAGCTGGTGGCAAGTTAAAAGAAGGATTTGGTAAGATTTCTGGAGA
TAAATCTTTAGAAACTGAAGGTAAAGTAGATAAAGTTACTGGAAAAGTTAAAGAGGTTATTGCAGACGCCAAAGATACTG
TAAAAGGATTAGCTAAAGGCTTAGATAATAAAGATAAATAA

Upstream 100 bases:

>100_bases
TCAGTGGATAACGGTGTTGAAAAACTTCAAGATCAAAAAGCTGAGCCACGTGTAAAATAATCATATGTCGTCAATTAGGT
AAGCTAAAGGAGGGTTTATT

Downstream 100 bases:

>100_bases
AGGGGACATGATGGAAAAAACTCAAATTAAAAGCACTCTTACTTATGACGATAAGGTCATCGAAAAAATTGTCGGTCATG
CTTTGGAAAACGTTGGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MSDEKYNAKLDQAGGKLKEGFGKISGDKSLETEGKVDKVTGKVKEVIADAKDTVKGLAKGLDNKDK

Sequences:

>Translated_66_residues
MSDEKYNAKLDQAGGKLKEGFGKISGDKSLETEGKVDKVTGKVKEVIADAKDTVKGLAKGLDNKDK
>Mature_65_residues
SDEKYNAKLDQAGGKLKEGFGKISGDKSLETEGKVDKVTGKVKEVIADAKDTVKGLAKGLDNKDK

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 7026; Mature: 6895

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEKYNAKLDQAGGKLKEGFGKISGDKSLETEGKVDKVTGKVKEVIADAKDTVKGLAKG
CCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHC
LDNKDK
CCCCCC
>Mature Secondary Structure 
SDEKYNAKLDQAGGKLKEGFGKISGDKSLETEGKVDKVTGKVKEVIADAKDTVKGLAKG
CCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHC
LDNKDK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11917108 [H]