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The map label for this gene is yxbF [H]

Identifier: 15675217

GI number: 15675217

Start: 1039569

End: 1040111

Strand: Direct

Name: yxbF [H]

Synonym: SPy_1258

Alternate gene names: 15675217

Gene position: 1039569-1040111 (Clockwise)

Preceding gene: 15675196

Following gene: 15675226

Centisome position: 56.12

GC content: 37.02

Gene sequence:

>543_bases
ATGACCAAAAGACATACTGAAACCAAAGCTTATGTAAAGACCGCCTTAACCACCTTACTAACTGAACAATCTTTTGAAAC
TCTTACTGTCTCTGACCTTACTAAAAAGGCTGGTATCAATAGAGGAACCTTCTACCTCCACTACACTGATAAATTTGACA
TGATGAATCACTTCAAAAATGACACTCTGGATGATTTGTACCGTTTGTTAAATCAGGCTGAAATCTACACAGACACTCGA
CAAGTCCTCAATCAAACCTTGTCCTACCTTATAGAACATAGAGAATTTATAACCGCACTCGCTACTATTTCTTACCTCAA
ATTTCCGCAACTCATCAAGGATTTCTGTTACCAATTTTTGACTACTATTACTGGTTTCCAAGACATTGTGACCAATCAAT
ACCATATTCCTTATCCCTATGCTTTAGAAGTTTACCTTGCCAGTATTGAGAGCATTATCAGCTATTGGATTGCTAATGGC
TATCAAGAAACCACTGAAGAGGTTGCCGATATTATTCTCAAAGCAGTTACTCTAGACAATTAA

Upstream 100 bases:

>100_bases
GAACATAGTGTTGATTTAATTATAGCCTTATTATATAATGGCCCTAAGTATTTAACAAGAACAAATCTGACGCAACTGTT
GATTTAAGGAGCACCTGAGA

Downstream 100 bases:

>100_bases
AAAACATCAAAAGAGTCTGAAATCATGCTCCCAATCCCAAACAACTGTCTAAACAGATATTTTGGAAAGACAAACCATGA
TGATCTGCCTCTTTTAATAA

Product: TetR/AcrR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MTKRHTETKAYVKTALTTLLTEQSFETLTVSDLTKKAGINRGTFYLHYTDKFDMMNHFKNDTLDDLYRLLNQAEIYTDTR
QVLNQTLSYLIEHREFITALATISYLKFPQLIKDFCYQFLTTITGFQDIVTNQYHIPYPYALEVYLASIESIISYWIANG
YQETTEEVADIILKAVTLDN

Sequences:

>Translated_180_residues
MTKRHTETKAYVKTALTTLLTEQSFETLTVSDLTKKAGINRGTFYLHYTDKFDMMNHFKNDTLDDLYRLLNQAEIYTDTR
QVLNQTLSYLIEHREFITALATISYLKFPQLIKDFCYQFLTTITGFQDIVTNQYHIPYPYALEVYLASIESIISYWIANG
YQETTEEVADIILKAVTLDN
>Mature_179_residues
TKRHTETKAYVKTALTTLLTEQSFETLTVSDLTKKAGINRGTFYLHYTDKFDMMNHFKNDTLDDLYRLLNQAEIYTDTRQ
VLNQTLSYLIEHREFITALATISYLKFPQLIKDFCYQFLTTITGFQDIVTNQYHIPYPYALEVYLASIESIISYWIANGY
QETTEEVADIILKAVTLDN

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HTH tetR-type DNA-binding domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21017; Mature: 20886

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRHTETKAYVKTALTTLLTEQSFETLTVSDLTKKAGINRGTFYLHYTDKFDMMNHFKN
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCC
DTLDDLYRLLNQAEIYTDTRQVLNQTLSYLIEHREFITALATISYLKFPQLIKDFCYQFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTITGFQDIVTNQYHIPYPYALEVYLASIESIISYWIANGYQETTEEVADIILKAVTLDN
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKRHTETKAYVKTALTTLLTEQSFETLTVSDLTKKAGINRGTFYLHYTDKFDMMNHFKN
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCC
DTLDDLYRLLNQAEIYTDTRQVLNQTLSYLIEHREFITALATISYLKFPQLIKDFCYQFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTITGFQDIVTNQYHIPYPYALEVYLASIESIISYWIANGYQETTEEVADIILKAVTLDN
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]