Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is yufQ [H]
Identifier: 15675189
GI number: 15675189
Start: 1009942
End: 1010898
Strand: Reverse
Name: yufQ [H]
Synonym: SPy_1225
Alternate gene names: 15675189
Gene position: 1010898-1009942 (Counterclockwise)
Preceding gene: 15675190
Following gene: 15675184
Centisome position: 54.57
GC content: 38.56
Gene sequence:
>957_bases ATGAGTTTAGTAACAATTTTTGCCTTATTGATGTCATCTATGCTTATTTATGCAACACCACTCATTTTCACAAGTATTGG AGGAACTTTCTCAGAGCGCTCAGGCGTTGTTAATGTTGGTTTAGAAGGTATCATGGTCATGGGAGCGTTCTCTGGGATTG TTTTCAACTTAGAGTTTGCTGAAACATTTGGAAAAGCAACGCCTTGGATAGCCGTTTTAGTCGGTGGTATTGTTGGTTTG ATTTTTTCTTTGATTCACGCTGTAGCAACCATCAACTTTCGAGCTGACCACATTGTCAGTGGTACAGTGTTGAACTTGTT AGCACCTTCTTTTGCTGTCTTCTTGGTTAAAGCTATGTACGGTAAGGGACAAACAGACAACATTCAACAATCTTTTGGGA AGTTTGATTTCCCAGGTTTATCACAAATTCCTGTGATTGGTGATATTTTCTTTAAAAATACTAGCCTTATTGGTTACTTC GCCATTGCTTTTTCGTTCTTTGCTTGGTTTTTGCTTTATAAAACCAGGTTTGGTCTGCGTTTACGATCAGTTGGGGAACA CCCTCAGGCAGCTGACACACTTGGTATTAACGTCTATTTGATGAAATACTATGGTGTGATGATCTCAGGTTTTCTTGGTG GAATAGGTGGAGCTGTTTATGCTCAGTCAATCTCCGTTAACTTTGCTGTAACAACTATCTTAGGTCCTGGATTTATTGCT TTGGCAGCTATGATCTTTGGTAAATGGAATCCAGTTGGCGCCATGCTATCTAGTCTTTTCTTTGGCTTATCGCAAAGTTT AGCCGTTATTGGTGCTCAATTACCATTACTAGAAAAGATTCCAACGGTTTACTTACAGATTGCACCTTATATGGTAACGA TTATTATTTTAGCTGCTTTCTTTGGTCAAGCAGTTGCACCAAAAGCTGATGGAATCAACTATATTAAATCTAAATAA
Upstream 100 bases:
>100_bases AAAGTAGTAACTGCATCAATCATTTTCTTTGTTGGTTCACATTACCTCATTGAACGTTACATTATTCGCCCTAAAAAATT AGTGAAAGGTGGTAAATAAG
Downstream 100 bases:
>100_bases CGTTATATTAGTAAGCCTCTTAGTGAGGTTTAACAGCACTCCTAAAGCAAGATAGTTAGGTCTAGCTTTAAGGGTGCTTT TTTGGGACTTACCGCAAGTT
Product: putative sugar ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSLVTIFALLMSSMLIYATPLIFTSIGGTFSERSGVVNVGLEGIMVMGAFSGIVFNLEFAETFGKATPWIAVLVGGIVGL IFSLIHAVATINFRADHIVSGTVLNLLAPSFAVFLVKAMYGKGQTDNIQQSFGKFDFPGLSQIPVIGDIFFKNTSLIGYF AIAFSFFAWFLLYKTRFGLRLRSVGEHPQAADTLGINVYLMKYYGVMISGFLGGIGGAVYAQSISVNFAVTTILGPGFIA LAAMIFGKWNPVGAMLSSLFFGLSQSLAVIGAQLPLLEKIPTVYLQIAPYMVTIIILAAFFGQAVAPKADGINYIKSK
Sequences:
>Translated_318_residues MSLVTIFALLMSSMLIYATPLIFTSIGGTFSERSGVVNVGLEGIMVMGAFSGIVFNLEFAETFGKATPWIAVLVGGIVGL IFSLIHAVATINFRADHIVSGTVLNLLAPSFAVFLVKAMYGKGQTDNIQQSFGKFDFPGLSQIPVIGDIFFKNTSLIGYF AIAFSFFAWFLLYKTRFGLRLRSVGEHPQAADTLGINVYLMKYYGVMISGFLGGIGGAVYAQSISVNFAVTTILGPGFIA LAAMIFGKWNPVGAMLSSLFFGLSQSLAVIGAQLPLLEKIPTVYLQIAPYMVTIIILAAFFGQAVAPKADGINYIKSK >Mature_317_residues SLVTIFALLMSSMLIYATPLIFTSIGGTFSERSGVVNVGLEGIMVMGAFSGIVFNLEFAETFGKATPWIAVLVGGIVGLI FSLIHAVATINFRADHIVSGTVLNLLAPSFAVFLVKAMYGKGQTDNIQQSFGKFDFPGLSQIPVIGDIFFKNTSLIGYFA IAFSFFAWFLLYKTRFGLRLRSVGEHPQAADTLGINVYLMKYYGVMISGFLGGIGGAVYAQSISVNFAVTTILGPGFIAL AAMIFGKWNPVGAMLSSLFFGLSQSLAVIGAQLPLLEKIPTVYLQIAPYMVTIIILAAFFGQAVAPKADGINYIKSK
Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG1079
COG function: function code R; Uncharacterized ABC-type transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 34065; Mature: 33934
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVTIFALLMSSMLIYATPLIFTSIGGTFSERSGVVNVGLEGIMVMGAFSGIVFNLEFA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEECHHHHHHHHHHHHHEEEEEHH ETFGKATPWIAVLVGGIVGLIFSLIHAVATINFRADHIVSGTVLNLLAPSFAVFLVKAMY HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GKGQTDNIQQSFGKFDFPGLSQIPVIGDIFFKNTSLIGYFAIAFSFFAWFLLYKTRFGLR CCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHH LRSVGEHPQAADTLGINVYLMKYYGVMISGFLGGIGGAVYAQSISVNFAVTTILGPGFIA HHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHCCHHHH LAAMIFGKWNPVGAMLSSLFFGLSQSLAVIGAQLPLLEKIPTVYLQIAPYMVTIIILAAF HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FGQAVAPKADGINYIKSK HHHHCCCCCCCCHHHCCC >Mature Secondary Structure SLVTIFALLMSSMLIYATPLIFTSIGGTFSERSGVVNVGLEGIMVMGAFSGIVFNLEFA HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEECHHHHHHHHHHHHHEEEEEHH ETFGKATPWIAVLVGGIVGLIFSLIHAVATINFRADHIVSGTVLNLLAPSFAVFLVKAMY HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GKGQTDNIQQSFGKFDFPGLSQIPVIGDIFFKNTSLIGYFAIAFSFFAWFLLYKTRFGLR CCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHH LRSVGEHPQAADTLGINVYLMKYYGVMISGFLGGIGGAVYAQSISVNFAVTTILGPGFIA HHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHCCHHHH LAAMIFGKWNPVGAMLSSLFFGLSQSLAVIGAQLPLLEKIPTVYLQIAPYMVTIIILAAF HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FGQAVAPKADGINYIKSK HHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]