Click here to switch to the map view.

The map label for this gene is 15675181

Identifier: 15675181

GI number: 15675181

Start: 1002381

End: 1002713

Strand: Reverse

Name: 15675181

Synonym: SPy_1217

Alternate gene names: NA

Gene position: 1002713-1002381 (Counterclockwise)

Preceding gene: 15675182

Following gene: 15675180

Centisome position: 54.13

GC content: 40.24

Gene sequence:

>333_bases
ATGAAAAAAATTGCAAATTACTTATTAATTGAGAAAACAGATGACCGCTATACCATTAGCATGACACCAGAATTACAAGA
CGATATTGGTACTATTGGTTACGCTGAATTTACGGATAACGACCACCTTGCCGTTGATGACATTATCTTAAATCTAGAGG
CTTCTAAGACTGTCATGTCTGTCTTGTCACCATTGGCTGGGGCAGTTGTTGAGCGCAATGAGGCAGCCACACTAACACCA
ACCCTTTTGAATTCAGAAAAAGCTGAGGAAAATTGGATTGTTGTGCTAACAGATGTTGATCAAGCAGCTTTTGATGCCCT
AGAAGATGCCTAG

Upstream 100 bases:

>100_bases
AATTTGCCAATAGACAACGAACCTTAGAGCTGCTAGCAGACTTATACGTGACCATTTAACCTTACCAAAAACAATTCCCT
AAACTGAAAGGAAAGAAACA

Downstream 100 bases:

>100_bases
TTCATTTGATTTATTAGGGGAAATGATTGGTCTGTTGCAAACAGAGCAGCTTACTAGTTCTTGGGCCTGTCCCTTGCCTA
ATGCTTTAACAAAGCGACAA

Product: putative glycine cleavage system H protein

Products: NA

Alternate protein names: GcvH Family Protein

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MKKIANYLLIEKTDDRYTISMTPELQDDIGTIGYAEFTDNDHLAVDDIILNLEASKTVMSVLSPLAGAVVERNEAATLTP
TLLNSEKAEENWIVVLTDVDQAAFDALEDA

Sequences:

>Translated_110_residues
MKKIANYLLIEKTDDRYTISMTPELQDDIGTIGYAEFTDNDHLAVDDIILNLEASKTVMSVLSPLAGAVVERNEAATLTP
TLLNSEKAEENWIVVLTDVDQAAFDALEDA
>Mature_110_residues
MKKIANYLLIEKTDDRYTISMTPELQDDIGTIGYAEFTDNDHLAVDDIILNLEASKTVMSVLSPLAGAVVERNEAATLTP
TLLNSEKAEENWIVVLTDVDQAAFDALEDA

Specific function: Unknown

COG id: COG0509

COG function: function code E; Glycine cleavage system H protein (lipoate-binding)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12088; Mature: 12088

Theoretical pI: Translated: 3.78; Mature: 3.78

Prosite motif: PS00189 LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIANYLLIEKTDDRYTISMTPELQDDIGTIGYAEFTDNDHLAVDDIILNLEASKTVMS
CCCHHCEEEEEECCCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEHEEEECCCHHHHHH
VLSPLAGAVVERNEAATLTPTLLNSEKAEENWIVVLTDVDQAAFDALEDA
HHHHHHHHHHCCCCCCEECHHHCCCCCCCCCEEEEEEECCHHHHHHHCCC
>Mature Secondary Structure
MKKIANYLLIEKTDDRYTISMTPELQDDIGTIGYAEFTDNDHLAVDDIILNLEASKTVMS
CCCHHCEEEEEECCCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEHEEEECCCHHHHHH
VLSPLAGAVVERNEAATLTPTLLNSEKAEENWIVVLTDVDQAAFDALEDA
HHHHHHHHHHCCCCCCEECHHHCCCCCCCCCEEEEEEECCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA