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The map label for this gene is yfmM [H]

Identifier: 15675171

GI number: 15675171

Start: 990663

End: 992228

Strand: Reverse

Name: yfmM [H]

Synonym: SPy_1206

Alternate gene names: 15675171

Gene position: 992228-990663 (Counterclockwise)

Preceding gene: 15675172

Following gene: 15675170

Centisome position: 53.56

GC content: 36.85

Gene sequence:

>1566_bases
ATGACAGTTAAGGAAGAAACGATGAGTATTTTAGAAGTTAAGCAGTTGAGTCACGGTTTTGGGGATCGGGCTATTTTTGA
AAATGTGTCATTTCGCCTCTTAAAAGGCGAACATATTGGACTAGTTGGGGCAAATGGTGAAGGAAAATCAACCTTTATGA
GTATAGTCACAGGACATTTACAGCCTGACGAAGGAAAAGTAGAGTGGTCGAAGTATGTCACTGCAGGTTACCTGGATCAA
CATACAGTGTTGGAATCAGGACAAACCGTTCGTGATGTCTTGCGAACTGCTTTTGATGAGTTATTTAAGACCGAGAATCG
TATTAATGAGATTTACGCGTCAATGGCAGATGATAAAGCTGATATTGCTGTTTTGATGGAAGAAGTAGGTGAGCTTCAAG
ATCGTTTAGAAAGTCGTGATTTCTATACTTTGGATGCTAAGATTGATGAAGTAGCGCGTGCGCTTGGTGTTATGGATTTT
GGAATGGAGTCAGATGTTACATCCTTATCAGGTGGGCAACGAACAAAGGTTTTATTAGCCAAATTACTATTAGAAAAACC
TGATATTCTGCTATTAGATGAACCAACTAACCATTTGGATGCTGAGCATATTGAATGGTTAAAACGCTATTTACAACATT
ATGAAAATGCTTTTGTGTTGATTTCGCATGATATTTCTTTCTTAAATGATGTGATTAATATTGTTTATCATGTTGAAAAT
CAAAGTTTAGTTCGCTATACTGGGGATTATTACCAATTTCAAGCTGTTTATGAGATGAAACAATCTCAACTTGAAGCAGC
CTATGAACGTCAACAAAAAGAGATTGCTAACTTGCAGGATTTTGTCAACCGAAATAAGGCTCGGGTAGCGACACGTAACA
TGGCAATGTCTCGCCAAAAAAAACTTGATAAGATGGATATAATTGAACTTCAAGCTGAGAAACCAAAACCAAATTTTGAA
TTTAAGCAAGCTAGAACTCCCAGTCGATTCATTTTTCAAACAAAAAATCTTGTGATTGGTTATGATTACCCATTGACCAA
AGAACCCTTAAATATAACGTTTGAAAGAAATCAAAAAATTGCTATTGTTGGGGCCAACGGTATTGGAAAATCTACTTTGC
TAAAAAGTTTATTAGGTGTTATTGAGCCTTTAGAAGGTCATATTGTCACAGGGGATTTTTTAGAAGTTGGCTACTTTGAA
CAAGAAGTGACAGGTGTTAACCGACAAACTCCGCTAGAAGTAGTTTGGGATGCTTTTCCTGCCTTAAATCAGGCAGAAGT
TCGAGCGGCACTAGCTCGTTGCGGACTAACATCAAAACATATCGAAAGTCAAATTCAAGTACTTTCGGGTGGTGAACAAG
CAAAAGTTCGTTTTTGTTTGTTGATGAATCGTGAAAATAACGTGCTTATTTTAGACGAACCAACAAATCATCTTGATATT
GATGCTAAAAATGAGCTCAAACGTGCTTTAAAAGCATATAAGGGTTCTATTTTAATGGTTTGTCATGAACCTGATTTCTA
CAATGGGTGGGTAACCGATACTTGGGATTTTAGTAAGTTAACCTAA

Upstream 100 bases:

>100_bases
ATCGATAAAAAAGCAAGGTACACTTTTAGTCAAATATTGACAAAAGGTTACAATTTTGCCATAATGAAATAACTATAAAG
CCGTTTTGACGGCTTTTTTG

Downstream 100 bases:

>100_bases
ACTATTCCTTAATTTTTTACACAGAAATTACTAAAATCAGTAAAGATATAGAATAAATACTGCTAGATATGTGATGGTTT
AGGTAACTGATCACCAACCA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MTVKEETMSILEVKQLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKSTFMSIVTGHLQPDEGKVEWSKYVTAGYLDQ
HTVLESGQTVRDVLRTAFDELFKTENRINEIYASMADDKADIAVLMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDF
GMESDVTSLSGGQRTKVLLAKLLLEKPDILLLDEPTNHLDAEHIEWLKRYLQHYENAFVLISHDISFLNDVINIVYHVEN
QSLVRYTGDYYQFQAVYEMKQSQLEAAYERQQKEIANLQDFVNRNKARVATRNMAMSRQKKLDKMDIIELQAEKPKPNFE
FKQARTPSRFIFQTKNLVIGYDYPLTKEPLNITFERNQKIAIVGANGIGKSTLLKSLLGVIEPLEGHIVTGDFLEVGYFE
QEVTGVNRQTPLEVVWDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNRENNVLILDEPTNHLDI
DAKNELKRALKAYKGSILMVCHEPDFYNGWVTDTWDFSKLT

Sequences:

>Translated_521_residues
MTVKEETMSILEVKQLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKSTFMSIVTGHLQPDEGKVEWSKYVTAGYLDQ
HTVLESGQTVRDVLRTAFDELFKTENRINEIYASMADDKADIAVLMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDF
GMESDVTSLSGGQRTKVLLAKLLLEKPDILLLDEPTNHLDAEHIEWLKRYLQHYENAFVLISHDISFLNDVINIVYHVEN
QSLVRYTGDYYQFQAVYEMKQSQLEAAYERQQKEIANLQDFVNRNKARVATRNMAMSRQKKLDKMDIIELQAEKPKPNFE
FKQARTPSRFIFQTKNLVIGYDYPLTKEPLNITFERNQKIAIVGANGIGKSTLLKSLLGVIEPLEGHIVTGDFLEVGYFE
QEVTGVNRQTPLEVVWDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNRENNVLILDEPTNHLDI
DAKNELKRALKAYKGSILMVCHEPDFYNGWVTDTWDFSKLT
>Mature_520_residues
TVKEETMSILEVKQLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKSTFMSIVTGHLQPDEGKVEWSKYVTAGYLDQH
TVLESGQTVRDVLRTAFDELFKTENRINEIYASMADDKADIAVLMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDFG
MESDVTSLSGGQRTKVLLAKLLLEKPDILLLDEPTNHLDAEHIEWLKRYLQHYENAFVLISHDISFLNDVINIVYHVENQ
SLVRYTGDYYQFQAVYEMKQSQLEAAYERQQKEIANLQDFVNRNKARVATRNMAMSRQKKLDKMDIIELQAEKPKPNFEF
KQARTPSRFIFQTKNLVIGYDYPLTKEPLNITFERNQKIAIVGANGIGKSTLLKSLLGVIEPLEGHIVTGDFLEVGYFEQ
EVTGVNRQTPLEVVWDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNRENNVLILDEPTNHLDID
AKNELKRALKAYKGSILMVCHEPDFYNGWVTDTWDFSKLT

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=517, Percent_Identity=29.0135396518375, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI10947135, Length=515, Percent_Identity=32.0388349514563, Blast_Score=193, Evalue=4e-49,
Organism=Homo sapiens, GI69354671, Length=515, Percent_Identity=32.0388349514563, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI10947137, Length=523, Percent_Identity=29.6367112810707, Blast_Score=189, Evalue=7e-48,
Organism=Homo sapiens, GI27881506, Length=523, Percent_Identity=29.6367112810707, Blast_Score=188, Evalue=8e-48,
Organism=Escherichia coli, GI1787041, Length=502, Percent_Identity=34.2629482071713, Blast_Score=265, Evalue=6e-72,
Organism=Escherichia coli, GI1789751, Length=487, Percent_Identity=28.3367556468172, Blast_Score=248, Evalue=5e-67,
Organism=Escherichia coli, GI2367384, Length=500, Percent_Identity=29.4, Blast_Score=231, Evalue=9e-62,
Organism=Escherichia coli, GI1787182, Length=527, Percent_Identity=28.6527514231499, Blast_Score=205, Evalue=5e-54,
Organism=Escherichia coli, GI1788897, Length=500, Percent_Identity=23.2, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1788506, Length=249, Percent_Identity=26.5060240963855, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1786975, Length=237, Percent_Identity=25.3164556962025, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788165, Length=165, Percent_Identity=30.9090909090909, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1789873, Length=218, Percent_Identity=25.2293577981651, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1787758, Length=149, Percent_Identity=25.503355704698, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=502, Percent_Identity=27.8884462151394, Blast_Score=207, Evalue=8e-54,
Organism=Caenorhabditis elegans, GI17553372, Length=504, Percent_Identity=29.3650793650794, Blast_Score=202, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI17555318, Length=519, Percent_Identity=28.9017341040462, Blast_Score=197, Evalue=8e-51,
Organism=Saccharomyces cerevisiae, GI6321121, Length=517, Percent_Identity=30.5609284332689, Blast_Score=229, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6320874, Length=512, Percent_Identity=29.296875, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6325030, Length=400, Percent_Identity=28.5, Blast_Score=134, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6324314, Length=398, Percent_Identity=27.1356783919598, Blast_Score=132, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6323278, Length=391, Percent_Identity=25.5754475703325, Blast_Score=118, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24666836, Length=512, Percent_Identity=30.46875, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24642252, Length=524, Percent_Identity=28.8167938931298, Blast_Score=202, Evalue=5e-52,
Organism=Drosophila melanogaster, GI18859989, Length=524, Percent_Identity=28.8167938931298, Blast_Score=202, Evalue=5e-52,
Organism=Drosophila melanogaster, GI24641342, Length=503, Percent_Identity=30.8151093439364, Blast_Score=198, Evalue=6e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59327; Mature: 59196

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKEETMSILEVKQLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKSTFMSIVTGHL
CCCHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEECCEEEEEECCCCCHHHHHHHHHCCC
QPDEGKVEWSKYVTAGYLDQHTVLESGQTVRDVLRTAFDELFKTENRINEIYASMADDKA
CCCCCCEEHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DIAVLMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMESDVTSLSGGQRTKVLLA
HHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHH
KLLLEKPDILLLDEPTNHLDAEHIEWLKRYLQHYENAFVLISHDISFLNDVINIVYHVEN
HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEEECC
QSLVRYTGDYYQFQAVYEMKQSQLEAAYERQQKEIANLQDFVNRNKARVATRNMAMSRQK
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KLDKMDIIELQAEKPKPNFEFKQARTPSRFIFQTKNLVIGYDYPLTKEPLNITFERNQKI
CCCCCCEEEEECCCCCCCCCHHHCCCCCCEEEEECCEEEEECCCCCCCCCEEEEECCCEE
AIVGANGIGKSTLLKSLLGVIEPLEGHIVTGDFLEVGYFEQEVTGVNRQTPLEVVWDAFP
EEEECCCCCHHHHHHHHHHHHCCCCCEEEECCHHCCCCHHHHHCCCCCCCCHHHHHHHHC
ALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNRENNVLILDEPTNHLDI
CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCCC
DAKNELKRALKAYKGSILMVCHEPDFYNGWVTDTWDFSKLT
CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TVKEETMSILEVKQLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKSTFMSIVTGHL
CCHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEECCEEEEEECCCCCHHHHHHHHHCCC
QPDEGKVEWSKYVTAGYLDQHTVLESGQTVRDVLRTAFDELFKTENRINEIYASMADDKA
CCCCCCEEHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
DIAVLMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMESDVTSLSGGQRTKVLLA
HHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHH
KLLLEKPDILLLDEPTNHLDAEHIEWLKRYLQHYENAFVLISHDISFLNDVINIVYHVEN
HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEEECC
QSLVRYTGDYYQFQAVYEMKQSQLEAAYERQQKEIANLQDFVNRNKARVATRNMAMSRQK
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KLDKMDIIELQAEKPKPNFEFKQARTPSRFIFQTKNLVIGYDYPLTKEPLNITFERNQKI
CCCCCCEEEEECCCCCCCCCHHHCCCCCCEEEEECCEEEEECCCCCCCCCEEEEECCCEE
AIVGANGIGKSTLLKSLLGVIEPLEGHIVTGDFLEVGYFEQEVTGVNRQTPLEVVWDAFP
EEEECCCCCHHHHHHHHHHHHCCCCCEEEECCHHCCCCHHHHHCCCCCCCCHHHHHHHHC
ALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNRENNVLILDEPTNHLDI
CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCCC
DAKNELKRALKAYKGSILMVCHEPDFYNGWVTDTWDFSKLT
CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]