Click here to switch to the map view.

The map label for this gene is ywkD [H]

Identifier: 15675131

GI number: 15675131

Start: 950309

End: 950722

Strand: Direct

Name: ywkD [H]

Synonym: SPy_1155

Alternate gene names: 15675131

Gene position: 950309-950722 (Clockwise)

Preceding gene: 15675130

Following gene: 15675132

Centisome position: 51.3

GC content: 36.23

Gene sequence:

>414_bases
ATGAAACTAAATGCCATTCATCACGTTGCTATTATTGTATCTGATTATCATCTGTCAAAAGATTTTTATGTGAATAAACT
CGGATTTGAAATTATCAGAGAAAATTATCGTCCTGACAAGCATGATTACAAATTAGATTTATCTTGTGGTCGTATTGAAT
TGGAGATTTTTGGTAAGGTGACAAGTGACCCCAACTATCAAGCTCCTCCTAAACGTGTAAGTGAACCAGAATTTAAAAGT
GAGGCCTGTGGTTTGAGGCACCTTGCATTTCGTGTTACCAACATTGAGAGTTATGTAGATGATCTAAAGAGCTTAGGAAT
TCCAGTGGAGCCTATCAGGCATGATGATTACACAGGTGAGAAAATGACTTTCTTTTTTGATCCGGATGGTTTGCCTTTAG
AATTACATGAATAG

Upstream 100 bases:

>100_bases
AACCAAGTATCTACCTAGATATATCTTAAATATAATATTTAAAAAGTAGGACCATAGAGAAAATTTATCTCATCCTACTT
TTTTTGAAAGGAGAAATATG

Downstream 100 bases:

>100_bases
ACTTATTAGGTTAACGACTGGATCGTGCTATAAAACTCGTTAAAAATAGTTATTTGTTGTATCTTCATTTGCTTGATTAA
TCTCTTTTGATCGTTAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKLNAIHHVAIIVSDYHLSKDFYVNKLGFEIIRENYRPDKHDYKLDLSCGRIELEIFGKVTSDPNYQAPPKRVSEPEFKS
EACGLRHLAFRVTNIESYVDDLKSLGIPVEPIRHDDYTGEKMTFFFDPDGLPLELHE

Sequences:

>Translated_137_residues
MKLNAIHHVAIIVSDYHLSKDFYVNKLGFEIIRENYRPDKHDYKLDLSCGRIELEIFGKVTSDPNYQAPPKRVSEPEFKS
EACGLRHLAFRVTNIESYVDDLKSLGIPVEPIRHDDYTGEKMTFFFDPDGLPLELHE
>Mature_137_residues
MKLNAIHHVAIIVSDYHLSKDFYVNKLGFEIIRENYRPDKHDYKLDLSCGRIELEIFGKVTSDPNYQAPPKRVSEPEFKS
EACGLRHLAFRVTNIESYVDDLKSLGIPVEPIRHDDYTGEKMTFFFDPDGLPLELHE

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081697, Length=138, Percent_Identity=45.6521739130435, Blast_Score=112, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 15896; Mature: 15896

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS00934 GLYOXALASE_I_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNAIHHVAIIVSDYHLSKDFYVNKLGFEIIRENYRPDKHDYKLDLSCGRIELEIFGKV
CCCCCEEEEEEEEECCCCCCCEEEHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEE
TSDPNYQAPPKRVSEPEFKSEACGLRHLAFRVTNIESYVDDLKSLGIPVEPIRHDDYTGE
CCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCC
KMTFFFDPDGLPLELHE
EEEEEECCCCCEEEECC
>Mature Secondary Structure
MKLNAIHHVAIIVSDYHLSKDFYVNKLGFEIIRENYRPDKHDYKLDLSCGRIELEIFGKV
CCCCCEEEEEEEEECCCCCCCEEEHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEE
TSDPNYQAPPKRVSEPEFKSEACGLRHLAFRVTNIESYVDDLKSLGIPVEPIRHDDYTGE
CCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCC
KMTFFFDPDGLPLELHE
EEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]