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The map label for this gene is agaC [H]

Identifier: 15675051

GI number: 15675051

Start: 867794

End: 868585

Strand: Direct

Name: agaC [H]

Synonym: SPy_1059

Alternate gene names: 15675051

Gene position: 867794-868585 (Clockwise)

Preceding gene: 15675050

Following gene: 15675052

Centisome position: 46.85

GC content: 41.54

Gene sequence:

>792_bases
ATGGCAGCTTTAGCTGTATTGATTTGTTTTGGGGGAAATTATTTAACCGGTCAAAGCATGATGGAAAGACCCCTAGTAGT
TGGACTGGTCACAGGTCTTCTTTTAGGAGATATGAAGGTCGGTATCTTAATGGGGGCCTCTCTAGAAGCTCTTTTCCTAG
GAAATGTGAATATTGGGGGTGTTATTGCAGCTGAGCCTGTAACAGCGACTGCCATGGCAACAACCTTTACCATTATTTCA
CATATTGACCAAAAAGCAGCCATGACCCTAGCTGTTCCAATTGGAATGTTGGCAGCCTTTGTGGTTATGTTTTTGAAAAA
CGTCTTCATGAATATCTTTGCTCCAATGGTTGATAAAGCTGCAGCAGCTAACCATCAAGGTAAACTAGTGATGCTCCACT
ATGGCACTTGGATTATCTATTACTTAATCATTGCCTCTATTTCTTTCATTGGTATCTTAGTAGGTAGTGGACCTGTTAAT
GCCTTTGTGGAACACATTCCTCAAAATCTCATGAATGGCTTGAGTGCTGCGGGAGGCCTTCTTCCAGCTGTCGGTTTTGC
CATGCTGATGAAATTATTGTGGACCAACAAATTAGCTGTTTTTTACCTATTGGGCTTTGTCTTAACAGCTTATTTGAAAT
TACCAGCGGTTGCAGTTGCTGCCCTAGGAGCAGTTATTTGCGTCATTAGTTCCCAACGTGATCTAGAATTAGACGCAATT
ACTAGAGGTGCAATTAGTAAACAAACAACCTTTGACTCTAAAGAATCAGAAGAGGAGGACTTCTTCGCATGA

Upstream 100 bases:

>100_bases
CTTGATGTCTTTAACCAAGTCTTACCATCAAATACCAAGGTCCATTTGAGCCAATTAGTCAACTAAAGAGAGGTAAAAAA
GTATGTTAGTACCAGCAACA

Downstream 100 bases:

>100_bases
CATCACAAGATAATTTGACTAAAGAAGACCGTAAAATGCTTCGCTCAGTCTTTTGGCGCTCATGGACGATGAATGCTAGT
CGTACTGGGGCAACACAATA

Product: PTS system mannose/fructose family transporter subunit IIC

Products: NA

Alternate protein names: EIIC-Aga; PTS system N-acetylgalactosamine-specific EIIC component 1 [H]

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MAALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIIS
HIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVN
AFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAI
TRGAISKQTTFDSKESEEEDFFA

Sequences:

>Translated_263_residues
MAALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIIS
HIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVN
AFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAI
TRGAISKQTTFDSKESEEEDFFA
>Mature_262_residues
AALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISH
IDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNA
FVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAIT
RGAISKQTTFDSKESEEEDFFA

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1789528, Length=240, Percent_Identity=29.5833333333333, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1788121, Length=212, Percent_Identity=30.188679245283, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: NA

Molecular weight: Translated: 27810; Mature: 27678

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGG
CHHHHEEHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
VIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGL
HHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHH
LPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
TRGAISKQTTFDSKESEEEDFFA
HHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AALAVLICFGGNYLTGQSMMERPLVVGLVTGLLLGDMKVGILMGASLEALFLGNVNIGG
HHHHEEHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
VIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMVDKA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGL
HHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHH
LPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
TRGAISKQTTFDSKESEEEDFFA
HHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 8932697 [H]