Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is cobQ [H]
Identifier: 15675031
GI number: 15675031
Start: 844696
End: 845487
Strand: Reverse
Name: cobQ [H]
Synonym: SPy_1034
Alternate gene names: 15675031
Gene position: 845487-844696 (Counterclockwise)
Preceding gene: 15675032
Following gene: 15675029
Centisome position: 45.64
GC content: 36.74
Gene sequence:
>792_bases ATGACATACACTTCACTAAAATCTCCCGAAAATCAAGATTACATCTACGACCTCACTATCGCCCATCTCTATGGTAATCT TATGAATACTTATGGTGATAACGGCAATATTTTAATGCTCAAGTATGTCGCTGAAAAACTTGGAGCTAGGGTTACTGTTG ATATTGTGTCTATCAATGATACCTTTGAACAAGACGATTACGATATTGTTTTCTTTGGTGGTGGTCAAGATTATGAACAA AGCATTGTTGCCAAGGATTTGCCTAGCAAAAAAGCTGCCTTAGCGGATTACATTGCTAATAATAAAGTGGTGCTTGCCAT CTGTGGTGGCTTCCAATTACTAGGGCAATACTATGTCCAAGCTAATGGGGTTAAAATTGATGGACTTGGAATTATGGGAC ACTACACCCTTAATCAGCACCAAAATCGCTTTATTGGAGATATTAAAATTCATAATGACGAATTTAACGAAACCTATTAT GGCTTTGAAAATCATCAAGGACGTACCTTCTTATCTGGTGACGAAAAGCCACTTGGACGAGTGGTTTATGGCAACGGTAA TAATAAAGAAGACCAAACTGAAGGTGTTCACTATAAAAACGTCTATGGTAGTTATTTCCACGGTCCTATCTTATCACGCA ATGTTAATCTTGCTTACCGCTTAGTAACAACAGCTCTTAAAAAAAAGTATGGATCAGCTATTTCACTACCTAGCTATGAT GATATACTGAAACAAGAAATCACTGAAGAATATGCCGACCTTAAAAGCAAAGCTTCCTTTAATAAAGTTTAA
Upstream 100 bases:
>100_bases AAGAAGCTAAGCATGCCTATATTTTAGCAACCTATACGGCAATGTTAGAATTCCGTAGCTTACTTGCTGACCGCCATGTC GTTGAAAAGGAGATGATCTA
Downstream 100 bases:
>100_bases GTTCTTCTTTCATGTCATCAAACAAAAACTCCTAAGTAGGACACGATAGTTCGCTTAGGAGTTTTATAGTTTTTTCTTCT GACAGAGCTTCTTAAGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTYTSLKSPENQDYIYDLTIAHLYGNLMNTYGDNGNILMLKYVAEKLGARVTVDIVSINDTFEQDDYDIVFFGGGQDYEQ SIVAKDLPSKKAALADYIANNKVVLAICGGFQLLGQYYVQANGVKIDGLGIMGHYTLNQHQNRFIGDIKIHNDEFNETYY GFENHQGRTFLSGDEKPLGRVVYGNGNNKEDQTEGVHYKNVYGSYFHGPILSRNVNLAYRLVTTALKKKYGSAISLPSYD DILKQEITEEYADLKSKASFNKV
Sequences:
>Translated_263_residues MTYTSLKSPENQDYIYDLTIAHLYGNLMNTYGDNGNILMLKYVAEKLGARVTVDIVSINDTFEQDDYDIVFFGGGQDYEQ SIVAKDLPSKKAALADYIANNKVVLAICGGFQLLGQYYVQANGVKIDGLGIMGHYTLNQHQNRFIGDIKIHNDEFNETYY GFENHQGRTFLSGDEKPLGRVVYGNGNNKEDQTEGVHYKNVYGSYFHGPILSRNVNLAYRLVTTALKKKYGSAISLPSYD DILKQEITEEYADLKSKASFNKV >Mature_262_residues TYTSLKSPENQDYIYDLTIAHLYGNLMNTYGDNGNILMLKYVAEKLGARVTVDIVSINDTFEQDDYDIVFFGGGQDYEQS IVAKDLPSKKAALADYIANNKVVLAICGGFQLLGQYYVQANGVKIDGLGIMGHYTLNQHQNRFIGDIKIHNDEFNETYYG FENHQGRTFLSGDEKPLGRVVYGNGNNKEDQTEGVHYKNVYGSYFHGPILSRNVNLAYRLVTTALKKKYGSAISLPSYDD ILKQEITEEYADLKSKASFNKV
Specific function: Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation [H]
COG id: COG3442
COG function: function code R; Predicted glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GATase cobBQ-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR017929 - InterPro: IPR004459 - InterPro: IPR011698 [H]
Pfam domain/function: PF01656 CbiA; PF07685 GATase_3 [H]
EC number: NA
Molecular weight: Translated: 29588; Mature: 29457
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYTSLKSPENQDYIYDLTIAHLYGNLMNTYGDNGNILMLKYVAEKLGARVTVDIVSIND CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCEEEEEEEEECC TFEQDDYDIVFFGGGQDYEQSIVAKDLPSKKAALADYIANNKVVLAICGGFQLLGQYYVQ CCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHEE ANGVKIDGLGIMGHYTLNQHQNRFIGDIKIHNDEFNETYYGFENHQGRTFLSGDEKPLGR ECCEEEECEEEEEEEECCCCCCCEEEEEEEECCCCCCEECCCCCCCCCEEECCCCCCCCE VVYGNGNNKEDQTEGVHYKNVYGSYFHGPILSRNVNLAYRLVTTALKKKYGSAISLPSYD EEECCCCCCCCHHCCCEEECCCCCHHCCCEEECCCCHHHHHHHHHHHHHHCCEECCCCHH DILKQEITEEYADLKSKASFNKV HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TYTSLKSPENQDYIYDLTIAHLYGNLMNTYGDNGNILMLKYVAEKLGARVTVDIVSIND CCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCEEEEEEEEECC TFEQDDYDIVFFGGGQDYEQSIVAKDLPSKKAALADYIANNKVVLAICGGFQLLGQYYVQ CCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHEE ANGVKIDGLGIMGHYTLNQHQNRFIGDIKIHNDEFNETYYGFENHQGRTFLSGDEKPLGR ECCEEEECEEEEEEEECCCCCCCEEEEEEEECCCCCCEECCCCCCCCCEEECCCCCCCCE VVYGNGNNKEDQTEGVHYKNVYGSYFHGPILSRNVNLAYRLVTTALKKKYGSAISLPSYD EEECCCCCCCCHHCCCEEECCCCCHHCCCEEECCCCHHHHHHHHHHHHHHCCEECCCCHH DILKQEITEEYADLKSKASFNKV HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]