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The map label for this gene is ydiF [H]

Identifier: 15675024

GI number: 15675024

Start: 832373

End: 834280

Strand: Direct

Name: ydiF [H]

Synonym: SPy_1025

Alternate gene names: 15675024

Gene position: 832373-834280 (Clockwise)

Preceding gene: 15675023

Following gene: 15675025

Centisome position: 44.93

GC content: 41.61

Gene sequence:

>1908_bases
ATGATTATTTTACAAGGAAACAAGTTAGAACGCTCTTTCTCAGGAGATGTTCTTTTTCAAAACATATCACTACAAGTTGA
TGAACGTGACCGCATTGCCTTGGTTGGTCCTAATGGAGCTGGCAAGTCGACTTTACTAAAATTATTGGTTGGGGAAGAAA
CCCCAACGAGCGGAGAAGTTAATACTAAAAAAGACCTAACCTTGTCTTATCTGGCTCAAAATAGCCGTTTTGAATCAGAT
CAAACAATATATGAGGAAATGCTCAAGGTTTTCGAAGCATTACGCCAAGATGAAAAGCGCCTGCGTCAGATGGAAATGGA
TATGGCAACCGTTTCAGGTCAAGTTTTAACCCGACTGATGACAGATTATGATCTGCTTACAGAGCATTTTCGTCAGCAAG
GCGGCTTTACGTATGAATCTGACATCAAAGCCATTTTAAATGGGTTTAAGTTTGATGAGAGCATGTGGCAGATGACTATC
GCTGAGCTGTCAGGGGGTCAAAATACTCGTCTGGCCTTGGCTAAAATGCTTTTAGAAAAGCCAGAACTATTGGTCCTTGA
TGAGCCAACAAACCACTTAGATATTGAAACCATTGCCTGGTTAGAGAACTACTTGGCCAACTATCAAGGAGCTCTAATCA
TTGTGAGTCACGACCGTTATTTTCTGGACAAAGTGGCGACCGTGACTTTAGATTTGACGCCTAACGGCTTAGATCGGTAT
AGTGGTAACTATTCTCGTTTTATGGCCTTAAAAGCTGAAAAACTAGTAGCCGAAGAAAAACAGTTCGATAAACAACAAAA
AGAAATTGCCAAGCTAGAAGATTTTGTTCAAAAAAACATTGTCAGGGCCTCTACCACAAAAAGGGCTCAGGCTAGGCGTA
AGCAATTGGAAAAAATAGAGCGTTTGGACAAACCCACAGGTGGGCGTAAATCTGCTCATATGACATTTCATGCAGAAAAA
CCATCAGGAAATGTTGTGCTAAGAGTTGAGGAAGCAGCCATCGGTTATGGAGACCAAGTCTTGTCCGAACCTATTAATGT
AGATATCAATAAGTTGGATGCTATTGCCGTTGTAGGGCCAAATGGTATTGGTAAATCAACCTTGATCAAGTCGATTATTG
GACAATTGCCTTTGCTCAAAGGACAACTCAAGTATGGTGCCAATGTCGAAACAGGTTATTATGACCAAACCCAATCACAT
TTGACGTCTAGCAACACAGTTTTGGAAGAATTATGGCAGGATTTTTCAACTACGCCAGAAGTCGATATCAGAAACCGATT
AGGGGCTTTTCTCTTTTCTGGAGATGATGTCAAAAAATCGGTGGCTATGCTGTCAGGTGGAGAAAAAGCCCGTCTGCTTC
TTGCGAAGTTATCTATGGAAAACAATAATTTTCTTGTTCTGGACGAGCCGACTAACCACCTAGACATTGACAGTAAAGAA
GTGCTAGAGAATGCCCTCATTGACTTTGACGGTACCTTGCTTTTTGTCAGCCACGACCGCTATTTCATTAATCGTTTGGC
AACTAAGGTTTTGGAAATTACCGAAAATGGCTCAACCCTTTACTTAGGTGACTATGATTATTACCTTGAGAAAAAGGCAG
AGCTAGAAGAATTAGCCCGCCTAGCAGCAGGAGAGACAGTTGAGGAAACAAAAGAAGCCTCTGCCACTGATTATCAGCTA
CAAAAAGCTAATCAAAAAGAGCGTCGTCGCTTGACCCGCCGATATGAGGAGATTGAAGCAAGACTTGAAACCATTGAAGA
GCGTATTGGTGCTATTCAAGAAGACATGCATGCCTCCAATGATACGGCGCAGTTAATCGCTTGGCAAAAGGAATGGGACC
AATTGGATCAAGAACAAGAAGCTCTTATGGAAGAATGGGAAACCATCGCTGAACAAATAGAATCATAA

Upstream 100 bases:

>100_bases
CGCTAAAGAAGGTAATCAACGACTTAAAAAGAGTTCGATTTCTTTTGGAAACTAGGCTGAAAATGTCCTCAAAAGGGTAT
TTTTTTGTTAGAATGAAAGT

Downstream 100 bases:

>100_bases
AAATAAGCTTTAGCAGTTTTGCTAAGCTTATTTTTATCGCTTTGCTACTTGTTTGAAGGTGTGAAAGAGGTTTTAAAATG
ATGTGTTTTTTATGTCAAGG

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 635; Mature: 635

Protein sequence:

>635_residues
MIILQGNKLERSFSGDVLFQNISLQVDERDRIALVGPNGAGKSTLLKLLVGEETPTSGEVNTKKDLTLSYLAQNSRFESD
QTIYEEMLKVFEALRQDEKRLRQMEMDMATVSGQVLTRLMTDYDLLTEHFRQQGGFTYESDIKAILNGFKFDESMWQMTI
AELSGGQNTRLALAKMLLEKPELLVLDEPTNHLDIETIAWLENYLANYQGALIIVSHDRYFLDKVATVTLDLTPNGLDRY
SGNYSRFMALKAEKLVAEEKQFDKQQKEIAKLEDFVQKNIVRASTTKRAQARRKQLEKIERLDKPTGGRKSAHMTFHAEK
PSGNVVLRVEEAAIGYGDQVLSEPINVDINKLDAIAVVGPNGIGKSTLIKSIIGQLPLLKGQLKYGANVETGYYDQTQSH
LTSSNTVLEELWQDFSTTPEVDIRNRLGAFLFSGDDVKKSVAMLSGGEKARLLLAKLSMENNNFLVLDEPTNHLDIDSKE
VLENALIDFDGTLLFVSHDRYFINRLATKVLEITENGSTLYLGDYDYYLEKKAELEELARLAAGETVEETKEASATDYQL
QKANQKERRRLTRRYEEIEARLETIEERIGAIQEDMHASNDTAQLIAWQKEWDQLDQEQEALMEEWETIAEQIES

Sequences:

>Translated_635_residues
MIILQGNKLERSFSGDVLFQNISLQVDERDRIALVGPNGAGKSTLLKLLVGEETPTSGEVNTKKDLTLSYLAQNSRFESD
QTIYEEMLKVFEALRQDEKRLRQMEMDMATVSGQVLTRLMTDYDLLTEHFRQQGGFTYESDIKAILNGFKFDESMWQMTI
AELSGGQNTRLALAKMLLEKPELLVLDEPTNHLDIETIAWLENYLANYQGALIIVSHDRYFLDKVATVTLDLTPNGLDRY
SGNYSRFMALKAEKLVAEEKQFDKQQKEIAKLEDFVQKNIVRASTTKRAQARRKQLEKIERLDKPTGGRKSAHMTFHAEK
PSGNVVLRVEEAAIGYGDQVLSEPINVDINKLDAIAVVGPNGIGKSTLIKSIIGQLPLLKGQLKYGANVETGYYDQTQSH
LTSSNTVLEELWQDFSTTPEVDIRNRLGAFLFSGDDVKKSVAMLSGGEKARLLLAKLSMENNNFLVLDEPTNHLDIDSKE
VLENALIDFDGTLLFVSHDRYFINRLATKVLEITENGSTLYLGDYDYYLEKKAELEELARLAAGETVEETKEASATDYQL
QKANQKERRRLTRRYEEIEARLETIEERIGAIQEDMHASNDTAQLIAWQKEWDQLDQEQEALMEEWETIAEQIES
>Mature_635_residues
MIILQGNKLERSFSGDVLFQNISLQVDERDRIALVGPNGAGKSTLLKLLVGEETPTSGEVNTKKDLTLSYLAQNSRFESD
QTIYEEMLKVFEALRQDEKRLRQMEMDMATVSGQVLTRLMTDYDLLTEHFRQQGGFTYESDIKAILNGFKFDESMWQMTI
AELSGGQNTRLALAKMLLEKPELLVLDEPTNHLDIETIAWLENYLANYQGALIIVSHDRYFLDKVATVTLDLTPNGLDRY
SGNYSRFMALKAEKLVAEEKQFDKQQKEIAKLEDFVQKNIVRASTTKRAQARRKQLEKIERLDKPTGGRKSAHMTFHAEK
PSGNVVLRVEEAAIGYGDQVLSEPINVDINKLDAIAVVGPNGIGKSTLIKSIIGQLPLLKGQLKYGANVETGYYDQTQSH
LTSSNTVLEELWQDFSTTPEVDIRNRLGAFLFSGDDVKKSVAMLSGGEKARLLLAKLSMENNNFLVLDEPTNHLDIDSKE
VLENALIDFDGTLLFVSHDRYFINRLATKVLEITENGSTLYLGDYDYYLEKKAELEELARLAAGETVEETKEASATDYQL
QKANQKERRRLTRRYEEIEARLETIEERIGAIQEDMHASNDTAQLIAWQKEWDQLDQEQEALMEEWETIAEQIES

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=525, Percent_Identity=32.1904761904762, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI10947135, Length=557, Percent_Identity=32.4955116696589, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI69354671, Length=557, Percent_Identity=32.4955116696589, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI10947137, Length=535, Percent_Identity=28.9719626168224, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI27881506, Length=535, Percent_Identity=28.9719626168224, Blast_Score=200, Evalue=3e-51,
Organism=Escherichia coli, GI1789751, Length=604, Percent_Identity=30.1324503311258, Blast_Score=295, Evalue=5e-81,
Organism=Escherichia coli, GI1787041, Length=540, Percent_Identity=34.4444444444444, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI2367384, Length=522, Percent_Identity=34.4827586206897, Blast_Score=289, Evalue=3e-79,
Organism=Escherichia coli, GI1787182, Length=637, Percent_Identity=31.3971742543171, Blast_Score=262, Evalue=4e-71,
Organism=Escherichia coli, GI1788165, Length=180, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788897, Length=232, Percent_Identity=25, Blast_Score=67, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17559834, Length=553, Percent_Identity=30.7414104882459, Blast_Score=235, Evalue=7e-62,
Organism=Caenorhabditis elegans, GI17553372, Length=509, Percent_Identity=30.8447937131631, Blast_Score=212, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI17555318, Length=526, Percent_Identity=28.7072243346008, Blast_Score=209, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6320874, Length=534, Percent_Identity=31.8352059925094, Blast_Score=233, Evalue=7e-62,
Organism=Saccharomyces cerevisiae, GI6321121, Length=551, Percent_Identity=30.8529945553539, Blast_Score=224, Evalue=3e-59,
Organism=Saccharomyces cerevisiae, GI6323278, Length=396, Percent_Identity=27.020202020202, Blast_Score=117, Evalue=8e-27,
Organism=Saccharomyces cerevisiae, GI6324314, Length=395, Percent_Identity=27.5949367088608, Blast_Score=114, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6325030, Length=389, Percent_Identity=27.2493573264781, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24666836, Length=549, Percent_Identity=33.1511839708561, Blast_Score=265, Evalue=1e-70,
Organism=Drosophila melanogaster, GI24642252, Length=546, Percent_Identity=29.4871794871795, Blast_Score=228, Evalue=9e-60,
Organism=Drosophila melanogaster, GI18859989, Length=546, Percent_Identity=29.4871794871795, Blast_Score=228, Evalue=9e-60,
Organism=Drosophila melanogaster, GI24641342, Length=548, Percent_Identity=30.1094890510949, Blast_Score=225, Evalue=6e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72112; Mature: 72112

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILQGNKLERSFSGDVLFQNISLQVDERDRIALVGPNGAGKSTLLKLLVGEETPTSGEV
CEEECCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCC
NTKKDLTLSYLAQNSRFESDQTIYEEMLKVFEALRQDEKRLRQMEMDMATVSGQVLTRLM
CCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDYDLLTEHFRQQGGFTYESDIKAILNGFKFDESMWQMTIAELSGGQNTRLALAKMLLEK
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PELLVLDEPTNHLDIETIAWLENYLANYQGALIIVSHDRYFLDKVATVTLDLTPNGLDRY
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCEEEEEEEECCCCHHHC
SGNYSRFMALKAEKLVAEEKQFDKQQKEIAKLEDFVQKNIVRASTTKRAQARRKQLEKIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLDKPTGGRKSAHMTFHAEKPSGNVVLRVEEAAIGYGDQVLSEPINVDINKLDAIAVVGP
HHCCCCCCCCCEEEEEEEECCCCCEEEEEEHHHCCCCHHHHCCCCCCCCCCCCEEEEECC
NGIGKSTLIKSIIGQLPLLKGQLKYGANVETGYYDQTQSHLTSSNTVLEELWQDFSTTPE
CCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCC
VDIRNRLGAFLFSGDDVKKSVAMLSGGEKARLLLAKLSMENNNFLVLDEPTNHLDIDSKE
CCHHHHHHHEEECCCHHHHHHHHHCCCCHHEEEEEEEECCCCCEEEEECCCCCCCCCHHH
VLENALIDFDGTLLFVSHDRYFINRLATKVLEITENGSTLYLGDYDYYLEKKAELEELAR
HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHEECCCCEEEECCCHHHHHHHHHHHHHHH
LAAGETVEETKEASATDYQLQKANQKERRRLTRRYEEIEARLETIEERIGAIQEDMHASN
HHCCCHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTAQLIAWQKEWDQLDQEQEALMEEWETIAEQIES
CHHHHEEEHHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIILQGNKLERSFSGDVLFQNISLQVDERDRIALVGPNGAGKSTLLKLLVGEETPTSGEV
CEEECCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCC
NTKKDLTLSYLAQNSRFESDQTIYEEMLKVFEALRQDEKRLRQMEMDMATVSGQVLTRLM
CCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDYDLLTEHFRQQGGFTYESDIKAILNGFKFDESMWQMTIAELSGGQNTRLALAKMLLEK
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PELLVLDEPTNHLDIETIAWLENYLANYQGALIIVSHDRYFLDKVATVTLDLTPNGLDRY
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCEEEEEEEECCCCHHHC
SGNYSRFMALKAEKLVAEEKQFDKQQKEIAKLEDFVQKNIVRASTTKRAQARRKQLEKIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLDKPTGGRKSAHMTFHAEKPSGNVVLRVEEAAIGYGDQVLSEPINVDINKLDAIAVVGP
HHCCCCCCCCCEEEEEEEECCCCCEEEEEEHHHCCCCHHHHCCCCCCCCCCCCEEEEECC
NGIGKSTLIKSIIGQLPLLKGQLKYGANVETGYYDQTQSHLTSSNTVLEELWQDFSTTPE
CCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCC
VDIRNRLGAFLFSGDDVKKSVAMLSGGEKARLLLAKLSMENNNFLVLDEPTNHLDIDSKE
CCHHHHHHHEEECCCHHHHHHHHHCCCCHHEEEEEEEECCCCCEEEEECCCCCCCCCHHH
VLENALIDFDGTLLFVSHDRYFINRLATKVLEITENGSTLYLGDYDYYLEKKAELEELAR
HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHEECCCCEEEECCCHHHHHHHHHHHHHHH
LAAGETVEETKEASATDYQLQKANQKERRRLTRRYEEIEARLETIEERIGAIQEDMHASN
HHCCCHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTAQLIAWQKEWDQLDQEQEALMEEWETIAEQIES
CHHHHEEEHHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]