Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is 15675021
Identifier: 15675021
GI number: 15675021
Start: 829392
End: 831053
Strand: Direct
Name: 15675021
Synonym: SPy_1020
Alternate gene names: NA
Gene position: 829392-831053 (Clockwise)
Preceding gene: 15675020
Following gene: 15675022
Centisome position: 44.77
GC content: 38.45
Gene sequence:
>1662_bases ATGACTGATATTAAAATGATTGCCTTGGGAGGGGTCCGTGAATACGGAAAAAACTTCTATTTGGTAGAAATTAACGATTC TATGTTTATTTTAGACGCAGGGCTCAAGTACCCTGAAAATGAGCAACTTGGGGTAGATTTAGTCATCCCCAATTTAGATT ATGTAATTGAAAACAAAGGTAAAGTACAAGGGATTTTCTTGAGTCATGGCCATGCTGACGCCATTGGAGCCCTTCCTTAT TTGTTAGCTGAAGTATCAGCTCCTGTATTTGGATCTGAATTGACTATTGAATTAGCCAAGCTATTTGTGAAAAGTAATAA CAGCACTAAGAAATTTAATAATTTTCATGTGGTAGACAGTGATACTGAAATTGAATTTAAAGATGGCCTAGTTTCGTTCT TTAGAACAACGCATTCAATCCCAGAAAGTATGGGTATTGTTATTGGAACAGATAAAGGAAACATTATTTATACCGGTGAC TTCAAATTTGATCAAGCAGCAAGAGAAGGTTATCAGACGGATTTGCTACGTTTAGCTGAGATTGGGAAAGAAGGGGTTCT AGCTCTTTTATCAGATTCAGTCAATGCGACAAGCAACGATCAGATTGCCAGCGAATCTGAAGTTGGTGAAGAAATGGACA GTGTTATCTCTGATGCTGATGGCCGTGTCATTGTAGCTGCAGTAGCCTCAAATCTTGTTCGGATTCAGCAAGTATTTGAT TCCGCCACTGCCCATGGGCGTCGTGTTGTTTTAACCGGAACAGATGCAGAAAATATTGTCAGAACAGCTTTACGTCTAGA AAAATTAATGATTACGGATGAGCGTCTTTTAATTAAACCTAAGGATATGTCTAAATTCGAAGACCATGAATTAATCATCC TTGAAGCTGGTCGTATGGGTGAGCCAATTAATAGCTTACAAAAAATGGCAGCGGGACGTCACCGTTATGTTCAAATCAAA GAAGGAGACCTTGTTTATATTGTAACAACACCAAGTACGGCTAAAGAAGCTATGGTGGCGCGTGTTGAAAACTTGATTTA CAAGGCCGGTGGTTCTGTTAAATTAATCACTCAAAACTTACGTGTTTCAGGCCATGCTAATGGGCGTGATTTGCAACTAT TGATGAATTTGTTAAAACCCCAGTATCTTTTTCCAGTACAAGGAGAATATCGTGATTTAGCTGCCCATGCAAAGCTAGCT GAAGAAGTTGGTATTTTTCCAGAGAATATTCATATTCTGAAGCGTGGCGATATCATGGTGCTTAATGACGAAGGTTTTCT CCATGAAGGAGGTGTACCTGCCAGTGATGTCATGATTGACGGTAATGCTATCGGTGATGTGGGTAATATCGTTTTACGAG ACCGTAAAGTCTTGTCAGAAGATGGTATTTTCATTGTTGCTATTACTGTTTCTAAAAAAGAAAAACGCATTATTTCTAAG GCTAAAGTTAATACGCGTGGATTTGTGTATGTCAAGAAAAGTCATGATATTTTAAGAGAAAGTGCAGAATTAGTTAATAC AACTGTTGGCAATTACTTAAAAAAAGATACCTTTGACTGGGGCGAATTAAAAGGGAATGTCAGAGATGATTTGTCTAAAT TCTTATTTGAACAAACCAAAAGGCGCCCAGCGATTCTGCCGGTTGTGATGGAAGTTCGTTAG
Upstream 100 bases:
>100_bases AATATGATATACTATAGAAGATAGTAGCATAGCTACATAACAGTAATTCGACTTACGTTGTAAGGACCGTTTGTAATAAT AAAATATTTAAAGGAGTATC
Downstream 100 bases:
>100_bases TGAAAATAGGAAGGTTAGGCAAAAACTGCCTACCTTCTTTGATTTTAACAACTGGTAAACCAGGAAACTGTTCACCCAAA AATACAGTAGATTTACGTGA
Product: Zn-dependent hydrolase
Products: NA
Alternate protein names: RNase J2 [H]
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MTDIKMIALGGVREYGKNFYLVEINDSMFILDAGLKYPENEQLGVDLVIPNLDYVIENKGKVQGIFLSHGHADAIGALPY LLAEVSAPVFGSELTIELAKLFVKSNNSTKKFNNFHVVDSDTEIEFKDGLVSFFRTTHSIPESMGIVIGTDKGNIIYTGD FKFDQAAREGYQTDLLRLAEIGKEGVLALLSDSVNATSNDQIASESEVGEEMDSVISDADGRVIVAAVASNLVRIQQVFD SATAHGRRVVLTGTDAENIVRTALRLEKLMITDERLLIKPKDMSKFEDHELIILEAGRMGEPINSLQKMAAGRHRYVQIK EGDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQNLRVSGHANGRDLQLLMNLLKPQYLFPVQGEYRDLAAHAKLA EEVGIFPENIHILKRGDIMVLNDEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKRIISK AKVNTRGFVYVKKSHDILRESAELVNTTVGNYLKKDTFDWGELKGNVRDDLSKFLFEQTKRRPAILPVVMEVR
Sequences:
>Translated_553_residues MTDIKMIALGGVREYGKNFYLVEINDSMFILDAGLKYPENEQLGVDLVIPNLDYVIENKGKVQGIFLSHGHADAIGALPY LLAEVSAPVFGSELTIELAKLFVKSNNSTKKFNNFHVVDSDTEIEFKDGLVSFFRTTHSIPESMGIVIGTDKGNIIYTGD FKFDQAAREGYQTDLLRLAEIGKEGVLALLSDSVNATSNDQIASESEVGEEMDSVISDADGRVIVAAVASNLVRIQQVFD SATAHGRRVVLTGTDAENIVRTALRLEKLMITDERLLIKPKDMSKFEDHELIILEAGRMGEPINSLQKMAAGRHRYVQIK EGDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQNLRVSGHANGRDLQLLMNLLKPQYLFPVQGEYRDLAAHAKLA EEVGIFPENIHILKRGDIMVLNDEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKRIISK AKVNTRGFVYVKKSHDILRESAELVNTTVGNYLKKDTFDWGELKGNVRDDLSKFLFEQTKRRPAILPVVMEVR >Mature_552_residues TDIKMIALGGVREYGKNFYLVEINDSMFILDAGLKYPENEQLGVDLVIPNLDYVIENKGKVQGIFLSHGHADAIGALPYL LAEVSAPVFGSELTIELAKLFVKSNNSTKKFNNFHVVDSDTEIEFKDGLVSFFRTTHSIPESMGIVIGTDKGNIIYTGDF KFDQAAREGYQTDLLRLAEIGKEGVLALLSDSVNATSNDQIASESEVGEEMDSVISDADGRVIVAAVASNLVRIQQVFDS ATAHGRRVVLTGTDAENIVRTALRLEKLMITDERLLIKPKDMSKFEDHELIILEAGRMGEPINSLQKMAAGRHRYVQIKE GDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQNLRVSGHANGRDLQLLMNLLKPQYLFPVQGEYRDLAAHAKLAE EVGIFPENIHILKRGDIMVLNDEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKRIISKA KVNTRGFVYVKKSHDILRESAELVNTTVGNYLKKDTFDWGELKGNVRDDLSKFLFEQTKRRPAILPVVMEVR
Specific function: Unknown
COG id: COG0595
COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR011108 - InterPro: IPR004613 [H]
Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]
EC number: NA
Molecular weight: Translated: 61194; Mature: 61063
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIKMIALGGVREYGKNFYLVEINDSMFILDAGLKYPENEQLGVDLVIPNLDYVIENKG CCCEEEEEECCHHHHCCEEEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCEEECCCC KVQGIFLSHGHADAIGALPYLLAEVSAPVFGSELTIELAKLFVKSNNSTKKFNNFHVVDS CEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECC DTEIEFKDGLVSFFRTTHSIPESMGIVIGTDKGNIIYTGDFKFDQAAREGYQTDLLRLAE CCCEEHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCCHHHHCCHHHHHHHHHH IGKEGVLALLSDSVNATSNDQIASESEVGEEMDSVISDADGRVIVAAVASNLVRIQQVFD CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH SATAHGRRVVLTGTDAENIVRTALRLEKLMITDERLLIKPKDMSKFEDHELIILEAGRMG HHHCCCCEEEEECCCHHHHHHHHHHHHHHEECCCEEEEECCCCCCCCCCCEEEEECCCCC EPINSLQKMAAGRHRYVQIKEGDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQNL CCHHHHHHHHCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEE RVSGHANGRDLQLLMNLLKPQYLFPVQGEYRDLAAHAKLAEEVGIFPENIHILKRGDIMV EEECCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEE LNDEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKRIISK ECCCCCEECCCCCHHHEEECCCCCCCCCCEEEECCHHHCCCCEEEEEEEECCHHHHHHHH AKVNTRGFVYVKKSHDILRESAELVNTTVGNYLKKDTFDWGELKGNVRDDLSKFLFEQTK HCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHC RRPAILPVVMEVR CCCCEEEEEEEEC >Mature Secondary Structure TDIKMIALGGVREYGKNFYLVEINDSMFILDAGLKYPENEQLGVDLVIPNLDYVIENKG CCEEEEEECCHHHHCCEEEEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCEEECCCC KVQGIFLSHGHADAIGALPYLLAEVSAPVFGSELTIELAKLFVKSNNSTKKFNNFHVVDS CEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECC DTEIEFKDGLVSFFRTTHSIPESMGIVIGTDKGNIIYTGDFKFDQAAREGYQTDLLRLAE CCCEEHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCCHHHHCCHHHHHHHHHH IGKEGVLALLSDSVNATSNDQIASESEVGEEMDSVISDADGRVIVAAVASNLVRIQQVFD CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH SATAHGRRVVLTGTDAENIVRTALRLEKLMITDERLLIKPKDMSKFEDHELIILEAGRMG HHHCCCCEEEEECCCHHHHHHHHHHHHHHEECCCEEEEECCCCCCCCCCCEEEEECCCCC EPINSLQKMAAGRHRYVQIKEGDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQNL CCHHHHHHHHCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEE RVSGHANGRDLQLLMNLLKPQYLFPVQGEYRDLAAHAKLAEEVGIFPENIHILKRGDIMV EEECCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEE LNDEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKRIISK ECCCCCEECCCCCHHHEEECCCCCCCCCCEEEECCHHHCCCCEEEEEEEECCHHHHHHHH AKVNTRGFVYVKKSHDILRESAELVNTTVGNYLKKDTFDWGELKGNVRDDLSKFLFEQTK HCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHC RRPAILPVVMEVR CCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA