Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is yubA [H]
Identifier: 15675014
GI number: 15675014
Start: 821737
End: 822918
Strand: Direct
Name: yubA [H]
Synonym: SPy_1011
Alternate gene names: 15675014
Gene position: 821737-822918 (Clockwise)
Preceding gene: 15675013
Following gene: 15675015
Centisome position: 44.36
GC content: 38.41
Gene sequence:
>1182_bases ATGCCCTTAATACCTGAAAAGTCTAGAACAGATAGCTTATTTTACAAATGGTTTTTAAATAATCAAGCTACCATGGCTTT AGTAATAACACTTTTAGCCTTTTTAACGATTTTTGTTTTTACTAAAATCTCTTTTTTATTTATGCCAGTGATTTCTTTTT TTGCGGTCATCATGTTGCCCTTGGTTATTTCGACCATTCTGTATTATCTGACCAAACCCTTAGTTGACCTTATTAATCAC TTGGGCCCGAATCGTACCACCTCTATTTTTATTGTTTTTGGTTTGATTACCTTACTTTTTGTCTGGGCGATTTCAGGCTT TGTTCCCATGGTACAGACCCAACTTACCAGTTTTATTGAGGATCTGCCCAAATACGTGGGCAAGGTCAATGAAGAAGCCA ATAAACTTCTTGAAAATGAATGGTTAGTCAGCTATAAGCCCCAACTCCAAGACATGCTTACCCATACAAGTCAAAAGGCT TTGGATTACGCGCAAAGTTTTTCAAAAAATGCTATTGACTGGGCTGGTAATTTTGCTGGTGCCATTGCTCGGATTACCGT GGCTATTATTATTTCGCCCTTTATTCTCTTTTATTTTTTACGAGACAGTAGCCACATGAAAAATGGCCTTGTGAATGTCT TACCTCTCAAATTACGGGTGCCTATGGTTCGAGTCTTGGGAGATATTAACAAGCAATTATCAGGCTATGTGCAAGGGCAG GTTACGGTTGCAATTGTTGTCGGCTTTATGTTTTCTATCATGTTTAGCCTTGTGGGACTGAAATATGCCATCACTTTTGG GATTATTGCTGGCTTTCTTAACATGATACCTTACTTAGGAAGTTTCCTTGCCATGATACCTGTTGTGATTATGGCTATGG TACAAGGCCCATTTATGTTGGTTAAGGTGCTTGTTATCTTTATGATTGAGCAAACCATCGAAGGGCGTTTTGTAGCACCG CTTGTTTTGGGAAATAAGCTGAGCATTCATCCTATTACCATTATGTTCTTGTTATTGACTGCAGGCTCTATGTTTGGTGT CTGGGGTGTTTTCCTTGTCATCCCAATCTACGCTTCTGTCAAAGTTGTGATTAAAGAATTATTTGACTGGTACAAAAAAG TTAGCGGTTTGTATGACGAAGAAGTATTGGTGATTGAGGAGGTTAAGGACCATGTTAAATAG
Upstream 100 bases:
>100_bases CCAAAACAACCAACTCATGGATAAATCTGTGACCTTTTATTGATTTACCCAGGTTACCAGTAAAACCTATCATTTTCCCA AAGAAAGGAACCCTATCTTA
Downstream 100 bases:
>100_bases TGAAAAAATGATTGCTTCCTTGGATCAGCAAGACCTAGCGCACGCTGAAAAATATTTCCAAAAAGCTTTAAAAGAAGATG ATGCAGATAGTTTAATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MPLIPEKSRTDSLFYKWFLNNQATMALVITLLAFLTIFVFTKISFLFMPVISFFAVIMLPLVISTILYYLTKPLVDLINH LGPNRTTSIFIVFGLITLLFVWAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKA LDYAQSFSKNAIDWAGNFAGAIARITVAIIISPFILFYFLRDSSHMKNGLVNVLPLKLRVPMVRVLGDINKQLSGYVQGQ VTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIPYLGSFLAMIPVVIMAMVQGPFMLVKVLVIFMIEQTIEGRFVAP LVLGNKLSIHPITIMFLLLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKKVSGLYDEEVLVIEEVKDHVK
Sequences:
>Translated_393_residues MPLIPEKSRTDSLFYKWFLNNQATMALVITLLAFLTIFVFTKISFLFMPVISFFAVIMLPLVISTILYYLTKPLVDLINH LGPNRTTSIFIVFGLITLLFVWAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKA LDYAQSFSKNAIDWAGNFAGAIARITVAIIISPFILFYFLRDSSHMKNGLVNVLPLKLRVPMVRVLGDINKQLSGYVQGQ VTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIPYLGSFLAMIPVVIMAMVQGPFMLVKVLVIFMIEQTIEGRFVAP LVLGNKLSIHPITIMFLLLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKKVSGLYDEEVLVIEEVKDHVK >Mature_392_residues PLIPEKSRTDSLFYKWFLNNQATMALVITLLAFLTIFVFTKISFLFMPVISFFAVIMLPLVISTILYYLTKPLVDLINHL GPNRTTSIFIVFGLITLLFVWAISGFVPMVQTQLTSFIEDLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKAL DYAQSFSKNAIDWAGNFAGAIARITVAIIISPFILFYFLRDSSHMKNGLVNVLPLKLRVPMVRVLGDINKQLSGYVQGQV TVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIPYLGSFLAMIPVVIMAMVQGPFMLVKVLVIFMIEQTIEGRFVAPL VLGNKLSIHPITIMFLLLTAGSMFGVWGVFLVIPIYASVKVVIKELFDWYKKVSGLYDEEVLVIEEVKDHVK
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
Organism=Escherichia coli, GI1788838, Length=334, Percent_Identity=28.1437125748503, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI87082271, Length=313, Percent_Identity=20.7667731629393, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 44258; Mature: 44127
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIPEKSRTDSLFYKWFLNNQATMALVITLLAFLTIFVFTKISFLFMPVISFFAVIMLP CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVISTILYYLTKPLVDLINHLGPNRTTSIFIVFGLITLLFVWAISGFVPMVQTQLTSFIE HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKALDYAQSFSKNAIDWAGNFAG HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AIARITVAIIISPFILFYFLRDSSHMKNGLVNVLPLKLRVPMVRVLGDINKQLSGYVQGQ HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIPYLGSFLAMIPVVIMAMVQGPFML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VKVLVIFMIEQTIEGRFVAPLVLGNKLSIHPITIMFLLLTAGSMFGVWGVFLVIPIYASV HHHHHHHHHHHHHCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVVIKELFDWYKKVSGLYDEEVLVIEEVKDHVK HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure PLIPEKSRTDSLFYKWFLNNQATMALVITLLAFLTIFVFTKISFLFMPVISFFAVIMLP CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVISTILYYLTKPLVDLINHLGPNRTTSIFIVFGLITLLFVWAISGFVPMVQTQLTSFIE HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLPKYVGKVNEEANKLLENEWLVSYKPQLQDMLTHTSQKALDYAQSFSKNAIDWAGNFAG HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AIARITVAIIISPFILFYFLRDSSHMKNGLVNVLPLKLRVPMVRVLGDINKQLSGYVQGQ HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTVAIVVGFMFSIMFSLVGLKYAITFGIIAGFLNMIPYLGSFLAMIPVVIMAMVQGPFML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VKVLVIFMIEQTIEGRFVAPLVLGNKLSIHPITIMFLLLTAGSMFGVWGVFLVIPIYASV HHHHHHHHHHHHHCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVVIKELFDWYKKVSGLYDEEVLVIEEVKDHVK HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]