Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is xtmB [H]
Identifier: 15674984
GI number: 15674984
Start: 795133
End: 796422
Strand: Direct
Name: xtmB [H]
Synonym: SPy_0972
Alternate gene names: 15674984
Gene position: 795133-796422 (Clockwise)
Preceding gene: 15674983
Following gene: 15674985
Centisome position: 42.92
GC content: 38.45
Gene sequence:
>1290_bases ATGAAGACAACATCCCTGATTAAAGTAGATTTGCCATCAACAATCGGTATAGGTTATGGCGCTTTTTGGCGGTCTAGAAA TTTTTATCGAGTAGTTAAAGGCAGCCGTGGATCTAAAAAATCTAAAACGACTGCTTTAAATTTTATCGTCAGACTGCTGA AGTACCCTTGGGCTAACTTATTGGTCATCCGTAGATACTCAAACACTAACAAACAATCTACTTATACCGATTTTAAATGG GCGTGTAATCAATTAAAGGTTACACACCTTTTTAAGTTTAATGAGAGTTTGCCAGAAATAACTGTAAAGGCAACGGGCCA AAAGATACTGTTCCGTGGACTTGATGATGAGTTAAAAATCACATCTATTACTGTCGATGTTGGCGCTTTGTGCTGGGCTT GGTTTGAAGAGGCTTATCAAATTGAGACCGAAGATAAGTTTTCAACAGTTGTCGAATCAATCCGCGGTAGTTTAGATGCT CCTGATTTTTTTAAACAGATAACAGTCACGTTTAACCCGTGGTCAGAAAGACATTGGCTTAAACGTGTCTTTTTTGATGA AGAAACTAAACGGGCTGATACATTTTCTGGGACTACAACATTTAGAGTAAACGAATGGCTTGATGATGTCGATAAAAGAC GCTACGAAGATTTGTACAAGACTAATCCAAGGCGGGCTAGAATCGTGTGCGATGGTGAATGGGGCGTTGCTGAAGGTCTT GTTTTTGATAACTTTGAAGTCGTAGATTTTGATGTTGAAAAAACAATTCAACGCGTTAAAGAGACCTCGGCCGGTATGGA CTTTGGGTTTACTCAAGACCCTACAACTCTTATATGTGTTGCAGTTGACCTCGCAAACAAAGAGTTATGGCTTTACAACG AACATTATCAAAAGGCTATGTTAACAGATCATATTGTCAAAATGATAAGAGATAAAAACTTGCATAGGTCTTACATCGCA GGGGATAGCGCCGAAAAACGCCTCATTGCAGAAATAAAAAGTAAAGGGGTGTCTGGAATTGTCCCGAGTATTAAAGGTAA AGGGTCAATCATGCAAGGGATTCAATTCATGCAGGGGTTTAAGATATATATTCACCCATCTTGCGAACACACAATAGAAG AGTTTAATACTTACACTTTTAAGCAAGACAAAGAAGGTAATTGGTTAAACGAACCGATAGATAAGAATAACCACGTTATT GATGCGATTAGATATGCGCTTGAAAAATACCATATCAGAAGCAACGAGTCAAATCAGTTTGAAGTTCTTAGGGCTGGTTT TGGTTACTAG
Upstream 100 bases:
>100_bases CACGAAGAACAGGGTAGGGCTAGGGATAGAATTTATAAAGTTAATGGAGCTTACTCAGAAAAACGTGAATTAGAGCATTC TGGAACGGTGGTGTTTGCAA
Downstream 100 bases:
>100_bases AAAGGAAAATAATGTACACAGAATCATTTAGAGATAGTACGGGAAAGACTAAAACATTAGAGTTTAGGTTCCACCGTGAA GCTCGCATGAGGTATCAAGC
Product: putative terminase, large subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MKTTSLIKVDLPSTIGIGYGAFWRSRNFYRVVKGSRGSKKSKTTALNFIVRLLKYPWANLLVIRRYSNTNKQSTYTDFKW ACNQLKVTHLFKFNESLPEITVKATGQKILFRGLDDELKITSITVDVGALCWAWFEEAYQIETEDKFSTVVESIRGSLDA PDFFKQITVTFNPWSERHWLKRVFFDEETKRADTFSGTTTFRVNEWLDDVDKRRYEDLYKTNPRRARIVCDGEWGVAEGL VFDNFEVVDFDVEKTIQRVKETSAGMDFGFTQDPTTLICVAVDLANKELWLYNEHYQKAMLTDHIVKMIRDKNLHRSYIA GDSAEKRLIAEIKSKGVSGIVPSIKGKGSIMQGIQFMQGFKIYIHPSCEHTIEEFNTYTFKQDKEGNWLNEPIDKNNHVI DAIRYALEKYHIRSNESNQFEVLRAGFGY
Sequences:
>Translated_429_residues MKTTSLIKVDLPSTIGIGYGAFWRSRNFYRVVKGSRGSKKSKTTALNFIVRLLKYPWANLLVIRRYSNTNKQSTYTDFKW ACNQLKVTHLFKFNESLPEITVKATGQKILFRGLDDELKITSITVDVGALCWAWFEEAYQIETEDKFSTVVESIRGSLDA PDFFKQITVTFNPWSERHWLKRVFFDEETKRADTFSGTTTFRVNEWLDDVDKRRYEDLYKTNPRRARIVCDGEWGVAEGL VFDNFEVVDFDVEKTIQRVKETSAGMDFGFTQDPTTLICVAVDLANKELWLYNEHYQKAMLTDHIVKMIRDKNLHRSYIA GDSAEKRLIAEIKSKGVSGIVPSIKGKGSIMQGIQFMQGFKIYIHPSCEHTIEEFNTYTFKQDKEGNWLNEPIDKNNHVI DAIRYALEKYHIRSNESNQFEVLRAGFGY >Mature_429_residues MKTTSLIKVDLPSTIGIGYGAFWRSRNFYRVVKGSRGSKKSKTTALNFIVRLLKYPWANLLVIRRYSNTNKQSTYTDFKW ACNQLKVTHLFKFNESLPEITVKATGQKILFRGLDDELKITSITVDVGALCWAWFEEAYQIETEDKFSTVVESIRGSLDA PDFFKQITVTFNPWSERHWLKRVFFDEETKRADTFSGTTTFRVNEWLDDVDKRRYEDLYKTNPRRARIVCDGEWGVAEGL VFDNFEVVDFDVEKTIQRVKETSAGMDFGFTQDPTTLICVAVDLANKELWLYNEHYQKAMLTDHIVKMIRDKNLHRSYIA GDSAEKRLIAEIKSKGVSGIVPSIKGKGSIMQGIQFMQGFKIYIHPSCEHTIEEFNTYTFKQDKEGNWLNEPIDKNNHVI DAIRYALEKYHIRSNESNQFEVLRAGFGY
Specific function: Functions as a terminase [H]
COG id: COG1783
COG function: function code R; Phage terminase large subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqaT and phage SPP1 terminase large subunit [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006701 - InterPro: IPR006437 [H]
Pfam domain/function: PF04466 Terminase_3 [H]
EC number: NA
Molecular weight: Translated: 49788; Mature: 49788
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTSLIKVDLPSTIGIGYGAFWRSRNFYRVVKGSRGSKKSKTTALNFIVRLLKYPWANL CCCCEEEEEECCCCCCCCCHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCE LVIRRYSNTNKQSTYTDFKWACNQLKVTHLFKFNESLPEITVKATGQKILFRGLDDELKI EEEEECCCCCCCCCCCHHHHHHHHEEEEEEEECCCCCCCEEEEECCCEEEEECCCCCEEE TSITVDVGALCWAWFEEAYQIETEDKFSTVVESIRGSLDAPDFFKQITVTFNPWSERHWL EEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHEEEEEEECCCHHHHHH KRVFFDEETKRADTFSGTTTFRVNEWLDDVDKRRYEDLYKTNPRRARIVCDGEWGVAEGL HHHHCCCHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCE VFDNFEVVDFDVEKTIQRVKETSAGMDFGFTQDPTTLICVAVDLANKELWLYNEHYQKAM EECCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCEEEEEHHHHHHHH LTDHIVKMIRDKNLHRSYIAGDSAEKRLIAEIKSKGVSGIVPSIKGKGSIMQGIQFMQGF HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC KIYIHPSCEHTIEEFNTYTFKQDKEGNWLNEPIDKNNHVIDAIRYALEKYHIRSNESNQF EEEECCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC EVLRAGFGY CEECCCCCC >Mature Secondary Structure MKTTSLIKVDLPSTIGIGYGAFWRSRNFYRVVKGSRGSKKSKTTALNFIVRLLKYPWANL CCCCEEEEEECCCCCCCCCHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCE LVIRRYSNTNKQSTYTDFKWACNQLKVTHLFKFNESLPEITVKATGQKILFRGLDDELKI EEEEECCCCCCCCCCCHHHHHHHHEEEEEEEECCCCCCCEEEEECCCEEEEECCCCCEEE TSITVDVGALCWAWFEEAYQIETEDKFSTVVESIRGSLDAPDFFKQITVTFNPWSERHWL EEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHEEEEEEECCCHHHHHH KRVFFDEETKRADTFSGTTTFRVNEWLDDVDKRRYEDLYKTNPRRARIVCDGEWGVAEGL HHHHCCCHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCE VFDNFEVVDFDVEKTIQRVKETSAGMDFGFTQDPTTLICVAVDLANKELWLYNEHYQKAM EECCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCEEEEEHHHHHHHH LTDHIVKMIRDKNLHRSYIAGDSAEKRLIAEIKSKGVSGIVPSIKGKGSIMQGIQFMQGF HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC KIYIHPSCEHTIEEFNTYTFKQDKEGNWLNEPIDKNNHVIDAIRYALEKYHIRSNESNQF EEEECCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC EVLRAGFGY CEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 8083174 [H]