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The map label for this gene is 15674876

Identifier: 15674876

GI number: 15674876

Start: 693493

End: 693732

Strand: Direct

Name: 15674876

Synonym: SPy_0841

Alternate gene names: NA

Gene position: 693493-693732 (Clockwise)

Preceding gene: 15674875

Following gene: 15674877

Centisome position: 37.44

GC content: 35.0

Gene sequence:

>240_bases
ATGGATACCATTGAAAATCTTATTATCGCTATTGTGAAACCTTTGATTTCACAACCAGATAATCTTACCATTAAAATTGA
AGATACTCCTGACTTTTTAGAGTATCATCTTGACTTGGATGCTCAAGACATCGGTCGTGTTATCGGCAAAAAAGGTCGAA
CTATTACTGCGATAAGATCGATTGTCTACTCGGTTCCAACACTAGGAAAAAAAGTTCGCTTAGTTATTGATGAGAAATAA

Upstream 100 bases:

>100_bases
TAAAGGAGCGCAGCCTTCTGATACCGTTCGTAACATCTTGTCTAAAGCTGGTGTTATGGCTAAGTTCCACGACCAAAAAT
TCTCTAAATAATAACAGCCT

Downstream 100 bases:

>100_bases
TCACTAACTTGAGATGGATTGAAAAGCTTGTTGACTTAAAGTCAACAAGCTTTTTGAATAGCAAAAATCTTAATATTTCT
GAAATGAAAAGATTAGATTT

Product: RNA binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MDTIENLIIAIVKPLISQPDNLTIKIEDTPDFLEYHLDLDAQDIGRVIGKKGRTITAIRSIVYSVPTLGKKVRLVIDEK

Sequences:

>Translated_79_residues
MDTIENLIIAIVKPLISQPDNLTIKIEDTPDFLEYHLDLDAQDIGRVIGKKGRTITAIRSIVYSVPTLGKKVRLVIDEK
>Mature_79_residues
MDTIENLIIAIVKPLISQPDNLTIKIEDTPDFLEYHLDLDAQDIGRVIGKKGRTITAIRSIVYSVPTLGKKVRLVIDEK

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004088
- InterPro:   IPR020627 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8873; Mature: 8873

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTIENLIIAIVKPLISQPDNLTIKIEDTPDFLEYHLDLDAQDIGRVIGKKGRTITAIRS
CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCHHHHHHHHCCCCCCHHHHHH
IVYSVPTLGKKVRLVIDEK
HHHHCCCCCCEEEEEEECC
>Mature Secondary Structure
MDTIENLIIAIVKPLISQPDNLTIKIEDTPDFLEYHLDLDAQDIGRVIGKKGRTITAIRS
CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCHHHHHHHHCCCCCCHHHHHH
IVYSVPTLGKKVRLVIDEK
HHHHCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]