| Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
|---|---|
| Accession | NC_002737 |
| Length | 1,852,441 |
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The map label for this gene is 15674746
Identifier: 15674746
GI number: 15674746
Start: 548380
End: 549882
Strand: Direct
Name: 15674746
Synonym: SPy_0682
Alternate gene names: NA
Gene position: 548380-549882 (Clockwise)
Preceding gene: 15674745
Following gene: 15674747
Centisome position: 29.6
GC content: 40.92
Gene sequence:
>1503_bases ATGGGAGTAATCCAAAAAATAAAAAATCTTGTTACAAGGAGTAAATACGTGATGACAACGCAGAGTCTTACAAATATAAC TGATCATCCTAAAATAGCTATCAGTAAGCTAGAGTACGATCGTATAACAACCAATCTAAAGTATTATAAGAGCGATTGGG ATAGTGTTTTATACTTAAACACGGACGGCGAGACTAAAAAAAGAGATCTTAACCATCTACCAATTGCACGGACAGCTGCT AAAAAGATTGCCAGTCTAGTCTTTAACGAGCAGGCAGAGATTAAGGTTGATGATGATGCGGCTAACGAATTTATTAGTGA GACACTAAAAAACGACAGGTTTAATAAAAACTTCGAGCGGTATCTGGAGAGTTGTTTAGCGTTAGGCGGATTAGCTATGA GGCCTTATGTGGATGGTGATAAAGTTAGGGTAGCATTTGTTCAAGCGCCTGTTTTTTTGCCGCTGCAGAGTAATACGCAA GACGTTTCGAGTGCCGCCGTCGTCATTAAGTCCGTTAAGACAATCAACGGCAAAGAGGTCTACTATACCTTGATAGAGTT CCATGAGTGGCAGAGCTCTGATGATTATGTTATCTCAAATGAGTTATATCGCTCGGATGATAAAGCCAAAGTAGGTAGCC GAGTGCCGTTATCTGAGGTATACAAGGACTTAAAAGACGAGGCAAAAGTTACAGATGTGACTAGGCCTATCTTTACTTAT CTCAAGACCCCTGGAATGAATAACAAGGATATTAATAGCCCACTTGGGCTATCTATCTTTGATAACGCCAAGACAACGAT TGACTTTATCAATACGACCTATGACGAATTTATGTGGGAAGTTAAGATGGGTCAACGTCGAGTTGCTGTGCCAGAGAGTT TGACCGCTTTAACTGTTCGTACCGCTGATGGCGATGTTGTTCCAAGGCCTCGGTTCGAGTCTGATCAAAACGTTTATATC CGTATGGGCGGCAGGGATTTAGACTCAAGCGCAATACAGGACCTAACAACCCCTATTAGAGCTGATGACTATATCAAGGC TATCAACGAGGGCTTGTCGTTGTTTGAAATGCAAATAGGCGTATCCGCTGGGTTATTTAGTTTTGATGGCAAAAGCATGA AGACTGCAACAGAAATCGTCTCTGAAAACTCAGACACCTACCAAATGCGTAACAGTATTGTTACTTTAGTAGAGCAATCG CTAAAAGAGTTAGTTATCTCTATTTTTGAGATTGCTAAAGCTTATGATTTGTACCAAAGCGAAGTTCCAAGCATGGATAA CATCAGCATAAGTCTTGATGACGGTGTTTTTACAGATCGAGACGCTGAGTTAGACTACTGGATAAAAGTTGTTAATGCTG GCTTTGGCACTCGTGAGATGGCCATCCAAAAAGTGCTAAACGTGACAGAGGAAAAAGCCCAAGAAATAGCTGCAGAAATT AATACTGGAATCGTTGACGAAATCAATCAACAGCGCACTGATACACATTTATACGGAGAGTGA
Upstream 100 bases:
>100_bases AATGGCAAACCTATTGATAAAGATAACCATGCCATGGACGAGTTTAGATACAGCGTCAACGTGTTTGTGCATCGGTATTA CAACTAAAGGAGTTGCTTAA
Downstream 100 bases:
>100_bases TTAGATGAAAAAGAAGCCTATTAAGTTAAATGACGAACAGCTTCTTTTGGAAGCTAGTCAGTTATCTGATATGTATCATC AGCTGACTCTTGATTTATTT
Product: putative minor capsid protein
Products: NA
Alternate protein names: Phage Minor Capsid Protein; Portal Protein; Minor Protein Gp; Minor Capsid Protein R
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MGVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAA KKIASLVFNEQAEIKVDDDAANEFISETLKNDRFNKNFERYLESCLALGGLAMRPYVDGDKVRVAFVQAPVFLPLQSNTQ DVSSAAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEAKVTDVTRPIFTY LKTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQRRVAVPESLTALTVRTADGDVVPRPRFESDQNVYI RMGGRDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSMKTATEIVSENSDTYQMRNSIVTLVEQS LKELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMAIQKVLNVTEEKAQEIAAEI NTGIVDEINQQRTDTHLYGE
Sequences:
>Translated_500_residues MGVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAA KKIASLVFNEQAEIKVDDDAANEFISETLKNDRFNKNFERYLESCLALGGLAMRPYVDGDKVRVAFVQAPVFLPLQSNTQ DVSSAAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEAKVTDVTRPIFTY LKTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQRRVAVPESLTALTVRTADGDVVPRPRFESDQNVYI RMGGRDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSMKTATEIVSENSDTYQMRNSIVTLVEQS LKELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMAIQKVLNVTEEKAQEIAAEI NTGIVDEINQQRTDTHLYGE >Mature_499_residues GVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAAK KIASLVFNEQAEIKVDDDAANEFISETLKNDRFNKNFERYLESCLALGGLAMRPYVDGDKVRVAFVQAPVFLPLQSNTQD VSSAAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEAKVTDVTRPIFTYL KTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQRRVAVPESLTALTVRTADGDVVPRPRFESDQNVYIR MGGRDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSMKTATEIVSENSDTYQMRNSIVTLVEQSL KELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMAIQKVLNVTEEKAQEIAAEIN TGIVDEINQQRTDTHLYGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56457; Mature: 56326
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLN CCHHHHHHHHHHCCHHEEEEHHHHCCCCCCCEEEEHHHHHHHHCCHHHEECCCCEEEEEE TDGETKKRDLNHLPIARTAAKKIASLVFNEQAEIKVDDDAANEFISETLKNDRFNKNFER CCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCCCCHHHH YLESCLALGGLAMRPYVDGDKVRVAFVQAPVFLPLQSNTQDVSSAAVVIKSVKTINGKEV HHHHHHHHCCEEECCCCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCEE YYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEAKVTDVTRPIFTY EEEEEHHHCCCCCCCEEECCHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LKTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQRRVAVPESLTALTVR HCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHCCEEECCCCCCEEEEEE TADGDVVPRPRFESDQNVYIRMGGRDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIG ECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHC VSAGLFSFDGKSMKTATEIVSENSDTYQMRNSIVTLVEQSLKELVISIFEIAKAYDLYQS CCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMAIQKVLNVTEEKAQEIAAEI CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH NTGIVDEINQQRTDTHLYGE CCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure GVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLN CHHHHHHHHHHCCHHEEEEHHHHCCCCCCCEEEEHHHHHHHHCCHHHEECCCCEEEEEE TDGETKKRDLNHLPIARTAAKKIASLVFNEQAEIKVDDDAANEFISETLKNDRFNKNFER CCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCCCCHHHH YLESCLALGGLAMRPYVDGDKVRVAFVQAPVFLPLQSNTQDVSSAAVVIKSVKTINGKEV HHHHHHHHCCEEECCCCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCEE YYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEAKVTDVTRPIFTY EEEEEHHHCCCCCCCEEECCHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LKTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQRRVAVPESLTALTVR HCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHCCEEECCCCCCEEEEEE TADGDVVPRPRFESDQNVYIRMGGRDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIG ECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHC VSAGLFSFDGKSMKTATEIVSENSDTYQMRNSIVTLVEQSLKELVISIFEIAKAYDLYQS CCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMAIQKVLNVTEEKAQEIAAEI CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH NTGIVDEINQQRTDTHLYGE CCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA