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The map label for this gene is arpU [H]

Identifier: 15674742

GI number: 15674742

Start: 544343

End: 544777

Strand: Direct

Name: arpU [H]

Synonym: SPy_0677

Alternate gene names: 15674742

Gene position: 544343-544777 (Clockwise)

Preceding gene: 15674741

Following gene: 15674743

Centisome position: 29.39

GC content: 41.84

Gene sequence:

>435_bases
ATGACGTTTTTTCCTGAGATTGATATCCAAAAAACAAAATCCAATGCCAAGCGTAAATTGAGAGAGTATCCACGCTGGCG
AAGGATAGCTAATGACGTAGATACTCAAAAAGTTACAGCTACTTACTCCTTTGAGCCAAGGCAATCACATGGGGTTCCTA
GCAAACCGGTTGAGAGACTAGCGCTAAACCGTGTGTCAGCAGAACAAGAGCTGGATGCGATTGAGCAAGCCGTCAGTATG
ATACTAGAGCCAGAGAGACGCAGGATTTTGTATGACAAATACTTAGCGCCTTATAAAAAGGCAGATAAGGTTATTTATAC
AGAATTGTGTATGTCAGAGAGCTTTTACTATGATACACTTGACATTGCTTTGTTAGCTTTTGCAGAGCTGTACAGAGAGG
GTGTGTTGCTTGTTGAGGAAGGAGTTTTTAGCTAG

Upstream 100 bases:

>100_bases
GAAGAGAGGGCTTTTCTCCACAAAACAAAAAGACGTCCACACGGAACGCCCCCTTGGTTAAATTTAAGCTTAAATAAATT
ATACCATACTGGAGGCTTTC

Downstream 100 bases:

>100_bases
TTTTTATACAGTAATAAGATAGTTTATACATATTTTTACATGTTATTATAGTATTATCAAAATAACAAGAAGAGATAACC
TTTTAATCACTGACTATTTT

Product: phage associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTFFPEIDIQKTKSNAKRKLREYPRWRRIANDVDTQKVTATYSFEPRQSHGVPSKPVERLALNRVSAEQELDAIEQAVSM
ILEPERRRILYDKYLAPYKKADKVIYTELCMSESFYYDTLDIALLAFAELYREGVLLVEEGVFS

Sequences:

>Translated_144_residues
MTFFPEIDIQKTKSNAKRKLREYPRWRRIANDVDTQKVTATYSFEPRQSHGVPSKPVERLALNRVSAEQELDAIEQAVSM
ILEPERRRILYDKYLAPYKKADKVIYTELCMSESFYYDTLDIALLAFAELYREGVLLVEEGVFS
>Mature_143_residues
TFFPEIDIQKTKSNAKRKLREYPRWRRIANDVDTQKVTATYSFEPRQSHGVPSKPVERLALNRVSAEQELDAIEQAVSMI
LEPERRRILYDKYLAPYKKADKVIYTELCMSESFYYDTLDIALLAFAELYREGVLLVEEGVFS

Specific function: May be involved in the regulation of muramidase export [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006524 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16862; Mature: 16731

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFFPEIDIQKTKSNAKRKLREYPRWRRIANDVDTQKVTATYSFEPRQSHGVPSKPVERL
CCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCHHEEEEECCCCHHCCCCCCHHHHHH
ALNRVSAEQELDAIEQAVSMILEPERRRILYDKYLAPYKKADKVIYTELCMSESFYYDTL
HHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHH
DIALLAFAELYREGVLLVEEGVFS
HHHHHHHHHHHHCCEEEECCCCCC
>Mature Secondary Structure 
TFFPEIDIQKTKSNAKRKLREYPRWRRIANDVDTQKVTATYSFEPRQSHGVPSKPVERL
CCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCHHEEEEECCCCHHCCCCCCHHHHHH
ALNRVSAEQELDAIEQAVSMILEPERRRILYDKYLAPYKKADKVIYTELCMSESFYYDTL
HHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHH
DIALLAFAELYREGVLLVEEGVFS
HHHHHHHHHHHHCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387220 [H]