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The map label for this gene is yidA [C]

Identifier: 15674695

GI number: 15674695

Start: 496944

End: 497753

Strand: Reverse

Name: yidA [C]

Synonym: SPy_0617

Alternate gene names: 15674695

Gene position: 497753-496944 (Counterclockwise)

Preceding gene: 15674696

Following gene: 15674694

Centisome position: 26.87

GC content: 40.99

Gene sequence:

>810_bases
ATGTCTATCAAACTGGTTGCTGTCGATATTGATGGCACATTACTCACTGATGACCGTCGAATTACAGATGATGTTTTTCA
AGCTGTCCAAGAGGCTAAAGCCCAAGGGGTTCATGTGGTGATTGCTACTGGCAGACCTATTGCCGGAGTGATTTCATTAC
TCGAACAATTAGAACTCAACCACAAAGGAAACCACGTTATCACTTTTAATGGTGGCTTGGTGCAAGATGCCGAGACCGGC
GAAGAAATTGTTAAAGAATTGATGACTTACGACGATTATCTGGAAACGGAATTTTTGAGCCGAAAATTAGGAGTTCACAT
GCATGCCATTACCAAAGAAGGTATTTACACTGCCAATCGGAATATTGGAAAATACACAGTTCATGAATCGACTTTGGTAA
ACATGCCTATTTTCTATCGCACTCCCGAAGAAATGACCAATAAAGAAATCATCAAAATGATGATGATTGATGAACCTGAC
CTTTTGGACGCGGCCATCAAGCAAATTCCTCAACATTTCTTTGATAAGTACACCATCGTCAAGTCAACCCCTTTTTATTT
AGAGTTCATGCCAAAAACCGTCAGCAAGGGTAATGCCATCAAACACTTAGCTAAAAAACTCGGGCTAGATATGTCACAAA
CCATGGCCATCGGGGATGCTGAAAATGATCGTGCTATGTTAGAAGTCGTTGCCAACCCTGTTGTCATGGAAAATGGGGTT
CCTGAATTGAAAAAAATAGCCAAATACATCACCAAATCCAACAATGACAGTGGTGTGGCACATGCTATTCGCAAGTGGGT
ATTAAACTAA

Upstream 100 bases:

>100_bases
TTAAGTTTCCTTTCCCATCCCATGACAAAAGCACCTATTTTTAGTAAGATAGGAGGGAGAACATTTTTAAGATAAACCAC
AAAAAAACAAGGAGGATGCC

Downstream 100 bases:

>100_bases
TGTATACATATAAAATCGGAATATCTCCTGAAGAACATGATCAGTTTGTCTTAGCACAGCCACAAGCTGGCTTACTTCAA
AGTTCAAAGTGGGGAAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSIKLVAVDIDGTLLTDDRRITDDVFQAVQEAKAQGVHVVIATGRPIAGVISLLEQLELNHKGNHVITFNGGLVQDAETG
EEIVKELMTYDDYLETEFLSRKLGVHMHAITKEGIYTANRNIGKYTVHESTLVNMPIFYRTPEEMTNKEIIKMMMIDEPD
LLDAAIKQIPQHFFDKYTIVKSTPFYLEFMPKTVSKGNAIKHLAKKLGLDMSQTMAIGDAENDRAMLEVVANPVVMENGV
PELKKIAKYITKSNNDSGVAHAIRKWVLN

Sequences:

>Translated_269_residues
MSIKLVAVDIDGTLLTDDRRITDDVFQAVQEAKAQGVHVVIATGRPIAGVISLLEQLELNHKGNHVITFNGGLVQDAETG
EEIVKELMTYDDYLETEFLSRKLGVHMHAITKEGIYTANRNIGKYTVHESTLVNMPIFYRTPEEMTNKEIIKMMMIDEPD
LLDAAIKQIPQHFFDKYTIVKSTPFYLEFMPKTVSKGNAIKHLAKKLGLDMSQTMAIGDAENDRAMLEVVANPVVMENGV
PELKKIAKYITKSNNDSGVAHAIRKWVLN
>Mature_268_residues
SIKLVAVDIDGTLLTDDRRITDDVFQAVQEAKAQGVHVVIATGRPIAGVISLLEQLELNHKGNHVITFNGGLVQDAETGE
EIVKELMTYDDYLETEFLSRKLGVHMHAITKEGIYTANRNIGKYTVHESTLVNMPIFYRTPEEMTNKEIIKMMMIDEPDL
LDAAIKQIPQHFFDKYTIVKSTPFYLEFMPKTVSKGNAIKHLAKKLGLDMSQTMAIGDAENDRAMLEVVANPVVMENGVP
ELKKIAKYITKSNNDSGVAHAIRKWVLN

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family

Homologues:

Organism=Escherichia coli, GI2367265, Length=270, Percent_Identity=47.7777777777778, Blast_Score=265, Evalue=3e-72,
Organism=Escherichia coli, GI87081790, Length=281, Percent_Identity=28.4697508896797, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI48994981, Length=288, Percent_Identity=26.0416666666667, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87081741, Length=271, Percent_Identity=23.6162361623616, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y533_STRP6 (Q5XD45)

Other databases:

- EMBL:   CP000003
- RefSeq:   YP_059851.1
- HSSP:   P0A8Y5
- ProteinModelPortal:   Q5XD45
- SMR:   Q5XD45
- EnsemblBacteria:   EBSTRT00000038495
- GeneID:   2942304
- GenomeReviews:   CP000003_GR
- KEGG:   spa:M6_Spy0533
- GeneTree:   EBGT00050000026747
- HOGENOM:   HBG728500
- OMA:   YERYSIN
- ProtClustDB:   CLSK876829
- BioCyc:   SPYO286636:M6_SPY0533-MONOMER
- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150
- Gene3D:   G3DSA:3.40.50.1000
- TIGRFAMs:   TIGR00099
- TIGRFAMs:   TIGR01484

Pfam domain/function: PF08282 Hydrolase_3; SSF56784 SSF56784

EC number: NA

Molecular weight: Translated: 30143; Mature: 30012

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS01228 COF_1; PS01229 COF_2

Important sites: ACT_SITE 9-9

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKLVAVDIDGTLLTDDRRITDDVFQAVQEAKAQGVHVVIATGRPIAGVISLLEQLELN
CCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCC
HKGNHVITFNGGLVQDAETGEEIVKELMTYDDYLETEFLSRKLGVHMHAITKEGIYTANR
CCCCEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHCCEEECCC
NIGKYTVHESTLVNMPIFYRTPEEMTNKEIIKMMMIDEPDLLDAAIKQIPQHFFDKYTIV
CCCEEEEECCEEECCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEE
KSTPFYLEFMPKTVSKGNAIKHLAKKLGLDMSQTMAIGDAENDRAMLEVVANPVVMENGV
ECCCCEEEECCHHHCCCHHHHHHHHHHCCCHHHHEECCCCCCCHHHHHHHHCCEEECCCC
PELKKIAKYITKSNNDSGVAHAIRKWVLN
HHHHHHHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SIKLVAVDIDGTLLTDDRRITDDVFQAVQEAKAQGVHVVIATGRPIAGVISLLEQLELN
CEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCC
HKGNHVITFNGGLVQDAETGEEIVKELMTYDDYLETEFLSRKLGVHMHAITKEGIYTANR
CCCCEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHCCEEECCC
NIGKYTVHESTLVNMPIFYRTPEEMTNKEIIKMMMIDEPDLLDAAIKQIPQHFFDKYTIV
CCCEEEEECCEEECCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEE
KSTPFYLEFMPKTVSKGNAIKHLAKKLGLDMSQTMAIGDAENDRAMLEVVANPVVMENGV
ECCCCEEEECCHHHCCCHHHHHHHHHHCCCHHHHEECCCCCCCHHHHHHHHCCEEECCCC
PELKKIAKYITKSNNDSGVAHAIRKWVLN
HHHHHHHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA