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The map label for this gene is yfnB [H]

Identifier: 15674680

GI number: 15674680

Start: 479708

End: 480610

Strand: Direct

Name: yfnB [H]

Synonym: SPy_0596

Alternate gene names: 15674680

Gene position: 479708-480610 (Clockwise)

Preceding gene: 15674678

Following gene: 15674685

Centisome position: 25.9

GC content: 39.31

Gene sequence:

>903_bases
ATGATTACTGCTATTGTTTTTGATGTGGATGACACAATTTACGACCAGCAAGCGCCTTATCGAATCGCCATGGAAAAGTG
CTTCCCAGATTTTGATATGTCAGTAATGAATCAAGCTTATATTCGCTTTCGTCACTATTCAGATGTTGGATTCCCAAGAG
TAATGGCAGGGGAGTGGACCACAGAATATTTCCGATTCTGGCGTTGCAAGGAAACACTGCTTGAGTTTGGCTATCGAGAA
ATCGACGAAGCTGCGGGAGTACATTTTCAAGAAGTCTATGAGCACGAACTTGAGAACATTACCATGTTAGATGAGATGCG
CATGACCCTTGACTTTTTAAAATCAAAGAATGTTCCTATGGGGATTATTACCAATGGGCCAACAGAACATCAGCTGAAAA
AAGTTCGTAAATTAGGGCTTTATGATTATATTGATGCTAAGCGTGTCATTGTGAGCCAAGCAACAGGCTTTCAAAAACCA
GAAAAAGAAATTTTTAACCTGGCAGCAGAACAATTTGACATGAACCCACAAACCACACTATATGTTGGGGACTCTTATGA
CAATGATATCATGGGTGCCTTTAATGGTGGTTGGCATTCCATGTGGTTTAATCATAGAGGTCGTCAGCTAAAACCAGGCA
CTAAGCCTGTTTATGATGTGGCTATTGATAACTTTGAACAGCTCTTTGGTGCCGTTAAAGTACTCTTTGATTTACCTGAT
AATAAATTTATTTTTGATGTCAATGACAAGAAAAATCCAATTTTACAGATGGGAATCAATAATGGCTTGATGATGGCAGC
AGAGCGTTTACTTGAAAGCAACATGAGCATTGACAAGGTGGTTATCTTGCTTCGGTTAACCAAGCAACAAGAAAAAGTTT
TGCGCTTAAAATATGCCAGATAG

Upstream 100 bases:

>100_bases
ATGCGACTGCAGCGGGGCATTTTTTTGAAAATGAAATTGAAAAGCCTAATGGAAAATAGTATAATGATTGGGATATTAAA
CTAGAAAAGAAAAGAGACTC

Downstream 100 bases:

>100_bases
ATGAAACCATAATAGCCCACTAGATAATAATAAAAAAAGCTAGCAAAGTGAGTGTCTTGTCAGTAAGAGATCAATGTGTT
AGCTTTTTTTATTATTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MITAIVFDVDDTIYDQQAPYRIAMEKCFPDFDMSVMNQAYIRFRHYSDVGFPRVMAGEWTTEYFRFWRCKETLLEFGYRE
IDEAAGVHFQEVYEHELENITMLDEMRMTLDFLKSKNVPMGIITNGPTEHQLKKVRKLGLYDYIDAKRVIVSQATGFQKP
EKEIFNLAAEQFDMNPQTTLYVGDSYDNDIMGAFNGGWHSMWFNHRGRQLKPGTKPVYDVAIDNFEQLFGAVKVLFDLPD
NKFIFDVNDKKNPILQMGINNGLMMAAERLLESNMSIDKVVILLRLTKQQEKVLRLKYAR

Sequences:

>Translated_300_residues
MITAIVFDVDDTIYDQQAPYRIAMEKCFPDFDMSVMNQAYIRFRHYSDVGFPRVMAGEWTTEYFRFWRCKETLLEFGYRE
IDEAAGVHFQEVYEHELENITMLDEMRMTLDFLKSKNVPMGIITNGPTEHQLKKVRKLGLYDYIDAKRVIVSQATGFQKP
EKEIFNLAAEQFDMNPQTTLYVGDSYDNDIMGAFNGGWHSMWFNHRGRQLKPGTKPVYDVAIDNFEQLFGAVKVLFDLPD
NKFIFDVNDKKNPILQMGINNGLMMAAERLLESNMSIDKVVILLRLTKQQEKVLRLKYAR
>Mature_300_residues
MITAIVFDVDDTIYDQQAPYRIAMEKCFPDFDMSVMNQAYIRFRHYSDVGFPRVMAGEWTTEYFRFWRCKETLLEFGYRE
IDEAAGVHFQEVYEHELENITMLDEMRMTLDFLKSKNVPMGIITNGPTEHQLKKVRKLGLYDYIDAKRVIVSQATGFQKP
EKEIFNLAAEQFDMNPQTTLYVGDSYDNDIMGAFNGGWHSMWFNHRGRQLKPGTKPVYDVAIDNFEQLFGAVKVLFDLPD
NKFIFDVNDKKNPILQMGINNGLMMAAERLLESNMSIDKVVILLRLTKQQEKVLRLKYAR

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. YjjG family [H]

Homologues:

Organism=Escherichia coli, GI1790833, Length=116, Percent_Identity=37.0689655172414, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR011951 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 35075; Mature: 35075

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITAIVFDVDDTIYDQQAPYRIAMEKCFPDFDMSVMNQAYIRFRHYSDVGFPRVMAGEWT
CEEEEEEECCCHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCEEECCCHH
TEYFRFWRCKETLLEFGYREIDEAAGVHFQEVYEHELENITMLDEMRMTLDFLKSKNVPM
HHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCE
GIITNGPTEHQLKKVRKLGLYDYIDAKRVIVSQATGFQKPEKEIFNLAAEQFDMNPQTTL
EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEE
YVGDSYDNDIMGAFNGGWHSMWFNHRGRQLKPGTKPVYDVAIDNFEQLFGAVKVLFDLPD
EECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
NKFIFDVNDKKNPILQMGINNGLMMAAERLLESNMSIDKVVILLRLTKQQEKVLRLKYAR
CCEEEEECCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MITAIVFDVDDTIYDQQAPYRIAMEKCFPDFDMSVMNQAYIRFRHYSDVGFPRVMAGEWT
CEEEEEEECCCHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCEEECCCHH
TEYFRFWRCKETLLEFGYREIDEAAGVHFQEVYEHELENITMLDEMRMTLDFLKSKNVPM
HHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCE
GIITNGPTEHQLKKVRKLGLYDYIDAKRVIVSQATGFQKPEKEIFNLAAEQFDMNPQTTL
EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEE
YVGDSYDNDIMGAFNGGWHSMWFNHRGRQLKPGTKPVYDVAIDNFEQLFGAVKVLFDLPD
EECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
NKFIFDVNDKKNPILQMGINNGLMMAAERLLESNMSIDKVVILLRLTKQQEKVLRLKYAR
CCEEEEECCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]