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The map label for this gene is yrrN [H]

Identifier: 15674676

GI number: 15674676

Start: 474943

End: 475869

Strand: Direct

Name: yrrN [H]

Synonym: SPy_0590

Alternate gene names: 15674676

Gene position: 474943-475869 (Clockwise)

Preceding gene: 15674674

Following gene: 15674677

Centisome position: 25.64

GC content: 39.37

Gene sequence:

>927_bases
ATGGAAAAAATAATTATTACAGCCACAGCTGAAAGCATTGAGCAAGTCAAAGCTTTATTAGCTGCTGGTGTTGATCGTAT
TTATGTTGGTGAAGCCAATTACGGGTTACGTCTTCCCCATAATTTTTCTTATGATGAATTGAGACAAATTGCCAAACTAG
TGCATGATGCAGGCAAAGAGTTGACAGTAGCTTGCAATGCTTTGATGCATCAAGATATGATGGATCAGATCAAACCCTTT
TTAGACTTAATGATAGAGATTGCTGTTGATTATCTTGTGGTTGGTGATGCAGGTGTGTTTTATGTCAATAAAAGGGATGG
CTATAACTTTAAACTGATTTATGATACCTCTGTTTTTGTGACTTCTAGCCGTCAGGTAAATTTCTGGGGGCAACATGGTG
CTGTTGAAAGTGTTTTAGCAAGGGAAATCCCATCAGCAGAGTTATTCACCTTAGCTGAAAATTTGGAATTTCCAGCAGAG
GTGCTAGTTTACGGCGCCTCGGTGATTCATCACTCGAAACGTCCCTTGCTAGAAAATTATTACCATTTTACAAAGATTGA
TGATGAGGTTAGTCGTGAACGAGGACTTTTCTTGGCAGAACCAGGAGATGCTAGCAGCCATTACTCCATTTATGAAGACA
ATCATGGCACTCATATTTTCATTAATAACGATATCGACATGATGTCTAAATTGGGTGAGCTGTATGCGCATGGCTTAACT
CATTGGAAGCTAGATGGCATTTACTGTCCAGGTGATGATTTTGTCGCTATTACTAAATTGTTTATTCAGGCTAAAACCTT
ATTAGAAGCTGGGCAATTTACCCAAGAAGAAGCTGAAAAGCTTGATCAAGCAGTGCATGCCCATCATCCAGCTGGCCGTG
GATTAGATACTGGCTTTTATGAGTTCGATCCAAAAACCGTTAAATAA

Upstream 100 bases:

>100_bases
TGACTTATCATGCTATAACAGTAAGGGGACTAGCTTAACGTTTGGGCTTTTGCAAGAAATATGCTTAAGGTCTTAAAATT
TTTGGTATAATAAAGCTTAT

Downstream 100 bases:

>100_bases
GTAATCCTTGTCTTGAGTGAGTGGGCAAGACAGGGTTATGACACCATTACACAGGTAATCTACCTATCTTGAAAATAGAA
AGAATATCACATGTCACATA

Product: putative protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MEKIIITATAESIEQVKALLAAGVDRIYVGEANYGLRLPHNFSYDELRQIAKLVHDAGKELTVACNALMHQDMMDQIKPF
LDLMIEIAVDYLVVGDAGVFYVNKRDGYNFKLIYDTSVFVTSSRQVNFWGQHGAVESVLAREIPSAELFTLAENLEFPAE
VLVYGASVIHHSKRPLLENYYHFTKIDDEVSRERGLFLAEPGDASSHYSIYEDNHGTHIFINNDIDMMSKLGELYAHGLT
HWKLDGIYCPGDDFVAITKLFIQAKTLLEAGQFTQEEAEKLDQAVHAHHPAGRGLDTGFYEFDPKTVK

Sequences:

>Translated_308_residues
MEKIIITATAESIEQVKALLAAGVDRIYVGEANYGLRLPHNFSYDELRQIAKLVHDAGKELTVACNALMHQDMMDQIKPF
LDLMIEIAVDYLVVGDAGVFYVNKRDGYNFKLIYDTSVFVTSSRQVNFWGQHGAVESVLAREIPSAELFTLAENLEFPAE
VLVYGASVIHHSKRPLLENYYHFTKIDDEVSRERGLFLAEPGDASSHYSIYEDNHGTHIFINNDIDMMSKLGELYAHGLT
HWKLDGIYCPGDDFVAITKLFIQAKTLLEAGQFTQEEAEKLDQAVHAHHPAGRGLDTGFYEFDPKTVK
>Mature_308_residues
MEKIIITATAESIEQVKALLAAGVDRIYVGEANYGLRLPHNFSYDELRQIAKLVHDAGKELTVACNALMHQDMMDQIKPF
LDLMIEIAVDYLVVGDAGVFYVNKRDGYNFKLIYDTSVFVTSSRQVNFWGQHGAVESVLAREIPSAELFTLAENLEFPAE
VLVYGASVIHHSKRPLLENYYHFTKIDDEVSRERGLFLAEPGDASSHYSIYEDNHGTHIFINNDIDMMSKLGELYAHGLT
HWKLDGIYCPGDDFVAITKLFIQAKTLLEAGQFTQEEAEKLDQAVHAHHPAGRGLDTGFYEFDPKTVK

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI87081910, Length=238, Percent_Identity=23.9495798319328, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 34691; Mature: 34691

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIIITATAESIEQVKALLAAGVDRIYVGEANYGLRLPHNFSYDELRQIAKLVHDAGKE
CCEEEEEECHHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCCH
LTVACNALMHQDMMDQIKPFLDLMIEIAVDYLVVGDAGVFYVNKRDGYNFKLIYDTSVFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCEEEEEEECEEEE
TSSRQVNFWGQHGAVESVLAREIPSAELFTLAENLEFPAEVLVYGASVIHHSKRPLLENY
ECCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHH
YHFTKIDDEVSRERGLFLAEPGDASSHYSIYEDNHGTHIFINNDIDMMSKLGELYAHGLT
HHHHCCCHHHHHHCCEEEECCCCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHCCCC
HWKLDGIYCPGDDFVAITKLFIQAKTLLEAGQFTQEEAEKLDQAVHAHHPAGRGLDTGFY
EEEECCEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEE
EFDPKTVK
ECCCCCCC
>Mature Secondary Structure
MEKIIITATAESIEQVKALLAAGVDRIYVGEANYGLRLPHNFSYDELRQIAKLVHDAGKE
CCEEEEEECHHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCCH
LTVACNALMHQDMMDQIKPFLDLMIEIAVDYLVVGDAGVFYVNKRDGYNFKLIYDTSVFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCEEEEEEECEEEE
TSSRQVNFWGQHGAVESVLAREIPSAELFTLAENLEFPAEVLVYGASVIHHSKRPLLENY
ECCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHH
YHFTKIDDEVSRERGLFLAEPGDASSHYSIYEDNHGTHIFINNDIDMMSKLGELYAHGLT
HHHHCCCHHHHHHCCEEEECCCCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHCCCC
HWKLDGIYCPGDDFVAITKLFIQAKTLLEAGQFTQEEAEKLDQAVHAHHPAGRGLDTGFY
EEEECCEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEE
EFDPKTVK
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]