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The map label for this gene is nrdI

Identifier: 15674553

GI number: 15674553

Start: 354293

End: 354781

Strand: Direct

Name: nrdI

Synonym: SPy_0426

Alternate gene names: 15674553

Gene position: 354293-354781 (Clockwise)

Preceding gene: 15674552

Following gene: 15674554

Centisome position: 19.13

GC content: 41.72

Gene sequence:

>489_bases
ATGGCAGAGCTGATTATTGTGTATTTTTCATCTAAGTCCAATAACACCCATCGCTTCGTCCAAAAATTAGGCCTGCCTGC
TCAGCGCATACCAGTAGATAATAGGCCACTTGAAGTTTCCACCCATTACCTTTTGATTGTGCCTACCTATGCAGCTGGTG
GCTCAGATGCCAAAGGAGCCGTTTCTAAACAAGTGATTCGTTTTTTGAATAATCCTAACAATCGTAAACATTGTAAGGGA
GTGATTTCTTCTGGAAATACCAATTTTGGCGATACCTTTGCCTTAGCAGGCCCTATCATTTCTCAAAAATTGCAGGTCCC
CTTATTACACCAATTTGAACTATTAGGCACTGCTACAGATGTCAAAAAGGTACAGGCGATTTTTGCCCGCTTAAAGCATC
ACACACACGACAAGCAAAAACAAACCAACAACCTGATTACAGAAAGGACACACCCATGTCACAAACCAATGCGTCATACC
TCTCATTAA

Upstream 100 bases:

>100_bases
GCGTGCAGACGAAAACCATGACTTTTTCTCAGGCAATGGCTCATCTTATGTGATGGGGATCACCGAAGAAACCACAGATG
ACGATTGGGAGTTTTAAGAA

Downstream 100 bases:

>100_bases
ATGCACTGACCCGTTTTAAAAAACCAGACGGCAGCTACCATTTTGATAGCGATAAAGAAGCTGTTAGGCGCTACCTGGAA
GAACATGTCTCTCCCAATCA

Product: ribonucleotide reductase stimulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MAELIIVYFSSKSNNTHRFVQKLGLPAQRIPVDNRPLEVSTHYLLIVPTYAAGGSDAKGAVSKQVIRFLNNPNNRKHCKG
VISSGNTNFGDTFALAGPIISQKLQVPLLHQFELLGTATDVKKVQAIFARLKHHTHDKQKQTNNLITERTHPCHKPMRHT
SH

Sequences:

>Translated_162_residues
MAELIIVYFSSKSNNTHRFVQKLGLPAQRIPVDNRPLEVSTHYLLIVPTYAAGGSDAKGAVSKQVIRFLNNPNNRKHCKG
VISSGNTNFGDTFALAGPIISQKLQVPLLHQFELLGTATDVKKVQAIFARLKHHTHDKQKQTNNLITERTHPCHKPMRHT
SH
>Mature_161_residues
AELIIVYFSSKSNNTHRFVQKLGLPAQRIPVDNRPLEVSTHYLLIVPTYAAGGSDAKGAVSKQVIRFLNNPNNRKHCKGV
ISSGNTNFGDTFALAGPIISQKLQVPLLHQFELLGTATDVKKVQAIFARLKHHTHDKQKQTNNLITERTHPCHKPMRHTS
H

Specific function: Probably involved in ribonucleotide reductase function

COG id: COG1780

COG function: function code F; Protein involved in ribonucleotide reduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrdI family

Homologues:

Organism=Escherichia coli, GI1789029, Length=140, Percent_Identity=48.5714285714286, Blast_Score=138, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDI_STRP1 (Q9A176)

Other databases:

- EMBL:   AE004092
- EMBL:   CP000017
- RefSeq:   NP_268727.1
- RefSeq:   YP_281711.1
- ProteinModelPortal:   Q9A176
- SMR:   Q9A176
- EnsemblBacteria:   EBSTRT00000000727
- EnsemblBacteria:   EBSTRT00000027679
- GeneID:   3572559
- GeneID:   900676
- GenomeReviews:   AE004092_GR
- GenomeReviews:   CP000017_GR
- KEGG:   spy:SPy_0426
- KEGG:   spz:M5005_Spy_0348
- GeneTree:   EBGT00050000026966
- HOGENOM:   HBG697191
- OMA:   FELMGTA
- ProtClustDB:   PRK03600
- BioCyc:   SPYO160490:SPY0426-MONOMER
- BioCyc:   SPYO293653:M5005_SPY0348-MONOMER
- HAMAP:   MF_00128
- InterPro:   IPR020852
- InterPro:   IPR004465
- PIRSF:   PIRSF005087
- TIGRFAMs:   TIGR00333

Pfam domain/function: PF07972 Flavodoxin_NdrI

EC number: NA

Molecular weight: Translated: 18104; Mature: 17973

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELIIVYFSSKSNNTHRFVQKLGLPAQRIPVDNRPLEVSTHYLLIVPTYAAGGSDAKGA
CCEEEEEEEECCCCCHHHHHHHHCCCHHHCCCCCCCEEECCEEEEEEEEECCCCCCCCHH
VSKQVIRFLNNPNNRKHCKGVISSGNTNFGDTFALAGPIISQKLQVPLLHQFELLGTATD
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHH
VKKVQAIFARLKHHTHDKQKQTNNLITERTHPCHKPMRHTSH
HHHHHHHHHHHHHHCCHHHHHHHCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AELIIVYFSSKSNNTHRFVQKLGLPAQRIPVDNRPLEVSTHYLLIVPTYAAGGSDAKGA
CEEEEEEEECCCCCHHHHHHHHCCCHHHCCCCCCCEEECCEEEEEEEEECCCCCCCCHH
VSKQVIRFLNNPNNRKHCKGVISSGNTNFGDTFALAGPIISQKLQVPLLHQFELLGTATD
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHH
VKKVQAIFARLKHHTHDKQKQTNNLITERTHPCHKPMRHTSH
HHHHHHHHHHHHHHCCHHHHHHHCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296