Click here to switch to the map view.

The map label for this gene is scpA [H]

Identifier: 15674516

GI number: 15674516

Start: 315997

End: 316698

Strand: Direct

Name: scpA [H]

Synonym: SPy_0366

Alternate gene names: 15674516

Gene position: 315997-316698 (Clockwise)

Preceding gene: 15674515

Following gene: 15674517

Centisome position: 17.06

GC content: 34.9

Gene sequence:

>702_bases
ATGGATATAAAACTTAAAGATTTTGAAGGTCCTCTTGATTTACTCTTACACTTGGTATCACAGTACAAAGTTGACATCTA
CGAGGTTCCTATTGTTGAGGTTATTGAGCAGTACCTTAATTATATTGAAACCTTACAGGTAATGAAACTTGAAGTGGCTG
GTGACTACATGCTGATGGCAAGTCAGCTCATGTTAATCAAAAGTAGAAGGCTATTACCAAAGGTGGTAGAACACATCGAA
GAAGATTTAGAACAAGATCTGTTAGAAAAGATCGAAGAATATAGTCGCTTTAAAGCAGTTAGTCAAGCGTTAGCGAAGCA
ACATGACCAAAGGGCAAAATGGTATTCAAAACCTAAACAAGAATTAATTTTTGAAGATGCTATCTTACAGGAAGATAAAA
CGGTGATGGATCTATTTCTAGCTTTTTCAAACATAATGGCAGCTAAAAGAGCAGTTTTAAAAAACAACCATACAGTCATC
GAGCGTGATGATTATAAGATTGAAGACATGATGGCTTCTATTAAACAGCGACTGGAAAAAGAAAACGTTATTAGATTATC
AGCGATTTTTGAGGAATGCCAAACATTAAATGAAGTTATCAGTATATTTTTAGCTAGTCTAGAATTGATTAAGCTTCACG
TGGTATTTGTAGAGCAGCTCTCTAATTTTGGGGCTATCATACTACGAAAGGAGAAGAAATGA

Upstream 100 bases:

>100_bases
TTATTTTGAAAGAAAAACTAGCTGGTAAATCGATAATAGAACTTAGCGATATTCTTGGGCTGAAAAGCCCTATGACCTTA
GAAAAATACTACAAATCATA

Downstream 100 bases:

>100_bases
CGTATTTGTCACAGATAGAAGCGCTGCTATTTGTTGCAGGTGAAGAAGGATTAAGTTTGCGACATCTAGCGTCTATGTTA
TCATTAACGCCAACAGCTCT

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MDIKLKDFEGPLDLLLHLVSQYKVDIYEVPIVEVIEQYLNYIETLQVMKLEVAGDYMLMASQLMLIKSRRLLPKVVEHIE
EDLEQDLLEKIEEYSRFKAVSQALAKQHDQRAKWYSKPKQELIFEDAILQEDKTVMDLFLAFSNIMAAKRAVLKNNHTVI
ERDDYKIEDMMASIKQRLEKENVIRLSAIFEECQTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRKEKK

Sequences:

>Translated_233_residues
MDIKLKDFEGPLDLLLHLVSQYKVDIYEVPIVEVIEQYLNYIETLQVMKLEVAGDYMLMASQLMLIKSRRLLPKVVEHIE
EDLEQDLLEKIEEYSRFKAVSQALAKQHDQRAKWYSKPKQELIFEDAILQEDKTVMDLFLAFSNIMAAKRAVLKNNHTVI
ERDDYKIEDMMASIKQRLEKENVIRLSAIFEECQTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRKEKK
>Mature_233_residues
MDIKLKDFEGPLDLLLHLVSQYKVDIYEVPIVEVIEQYLNYIETLQVMKLEVAGDYMLMASQLMLIKSRRLLPKVVEHIE
EDLEQDLLEKIEEYSRFKAVSQALAKQHDQRAKWYSKPKQELIFEDAILQEDKTVMDLFLAFSNIMAAKRAVLKNNHTVI
ERDDYKIEDMMASIKQRLEKENVIRLSAIFEECQTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRKEKK

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 27319; Mature: 27319

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKLKDFEGPLDLLLHLVSQYKVDIYEVPIVEVIEQYLNYIETLQVMKLEVAGDYMLMA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SQLMLIKSRRLLPKVVEHIEEDLEQDLLEKIEEYSRFKAVSQALAKQHDQRAKWYSKPKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ELIFEDAILQEDKTVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHH
ENVIRLSAIFEECQTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRKEKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
>Mature Secondary Structure
MDIKLKDFEGPLDLLLHLVSQYKVDIYEVPIVEVIEQYLNYIETLQVMKLEVAGDYMLMA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SQLMLIKSRRLLPKVVEHIEEDLEQDLLEKIEEYSRFKAVSQALAKQHDQRAKWYSKPKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ELIFEDAILQEDKTVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLEK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHH
ENVIRLSAIFEECQTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRKEKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]