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The map label for this gene is yurN [H]

Identifier: 15674434

GI number: 15674434

Start: 219088

End: 220050

Strand: Direct

Name: yurN [H]

Synonym: SPy_0254

Alternate gene names: 15674434

Gene position: 219088-220050 (Clockwise)

Preceding gene: 15674433

Following gene: 15674435

Centisome position: 11.83

GC content: 38.21

Gene sequence:

>963_bases
ATGCACATGTCAAATGGTCACTGGAAAGAAGCTTTTCTTTTTAGAAAAGTTGAACAGAAAAAAGAGGTATTTCAAGTGAA
CGTCAATAAATTAAAAATGAGAGAGACGCTCATCTCATACGCTTTCTTAGCTCCGGTCTTGGTTTTCTTTGTGATTTTTG
TCTTGATACCGATGATTATGGGCTTTGTGACGAGCTTTTTCAATTATTCCATGACAGAGTTTACCTTTGTTGGTTTTGCT
AATTATGCTAGGATGTTTCAAGATCCCATTTTCATGAAGTCTCTTATTAACACCTTGATTATTGTTATTGGTTCGGTACC
TGTTGTAGTTTTCTTTTCCCTCTTTGTGGCGGCTAAAACCTACGACAAAAATGTAGTGGCGCGTTCGTTTTACCGGGCAG
TTTTCTTTCTGCCTGTTGTTACCGGAAGTGTTGCGGTGACGGTGGTTTGGAAATGGATCTATGATCCAATGTCAGGGATT
TTGAATTATGTCTTAAAATATGCTCATGTGATTGAACAAAATATTAGTTGGCTGGGAGATAAGCACTGGGCTTTGTTGGC
TATTATTGTTATTTTATTAACCACATCTGTTGGGCAGCCTATTATTCTATATATTGCTGCTATGGGAAATATTGATAACT
CTTTGGTAGAAGCTGCGCGTGTGGACGGCGCCACAGAATTTCAGGTGTTTTGGAATATCAAGTGGCCAAGTCTGCTGCCA
ACAACCTTATATATTGCTGTCATAACAACCATTAATTCCTTCCAATGTTTTGCTTTGATTCAACTTTTGACGTCTGGAGG
GCCAAATTATTCAACCAGTACCCTCATGTACTATTTGTATGAAAAGGCCTTTAAGCTCTCTGAATACGGCTATGCCAACA
CAATGGGTGTATTCTTGGCAGTCATGATTGCAATCATCAGCTTTGCTCAATTTAAAATTTTAGGTAATGATGTGGAATAT
TAG

Upstream 100 bases:

>100_bases
TGATGAAAAGCCAGAAGATGCTTTGAAAGCCTTCACTGAAAAAGCAAACAAGACAATCAAAAAAACACAATAAGTGTTCC
TAACAAGTGGCTTCTTTTCA

Downstream 100 bases:

>100_bases
GAGGATATTAAGATGACGAAAAAGAAACTAACCGCATCAGATATCTTAACCACTGTGATGCTATGTGTTTTGACCATTTT
GTTTATTTTTCCATTTTATT

Product: N-acetylneuraminate transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MHMSNGHWKEAFLFRKVEQKKEVFQVNVNKLKMRETLISYAFLAPVLVFFVIFVLIPMIMGFVTSFFNYSMTEFTFVGFA
NYARMFQDPIFMKSLINTLIIVIGSVPVVVFFSLFVAAKTYDKNVVARSFYRAVFFLPVVTGSVAVTVVWKWIYDPMSGI
LNYVLKYAHVIEQNISWLGDKHWALLAIIVILLTTSVGQPIILYIAAMGNIDNSLVEAARVDGATEFQVFWNIKWPSLLP
TTLYIAVITTINSFQCFALIQLLTSGGPNYSTSTLMYYLYEKAFKLSEYGYANTMGVFLAVMIAIISFAQFKILGNDVEY

Sequences:

>Translated_320_residues
MHMSNGHWKEAFLFRKVEQKKEVFQVNVNKLKMRETLISYAFLAPVLVFFVIFVLIPMIMGFVTSFFNYSMTEFTFVGFA
NYARMFQDPIFMKSLINTLIIVIGSVPVVVFFSLFVAAKTYDKNVVARSFYRAVFFLPVVTGSVAVTVVWKWIYDPMSGI
LNYVLKYAHVIEQNISWLGDKHWALLAIIVILLTTSVGQPIILYIAAMGNIDNSLVEAARVDGATEFQVFWNIKWPSLLP
TTLYIAVITTINSFQCFALIQLLTSGGPNYSTSTLMYYLYEKAFKLSEYGYANTMGVFLAVMIAIISFAQFKILGNDVEY
>Mature_320_residues
MHMSNGHWKEAFLFRKVEQKKEVFQVNVNKLKMRETLISYAFLAPVLVFFVIFVLIPMIMGFVTSFFNYSMTEFTFVGFA
NYARMFQDPIFMKSLINTLIIVIGSVPVVVFFSLFVAAKTYDKNVVARSFYRAVFFLPVVTGSVAVTVVWKWIYDPMSGI
LNYVLKYAHVIEQNISWLGDKHWALLAIIVILLTTSVGQPIILYIAAMGNIDNSLVEAARVDGATEFQVFWNIKWPSLLP
TTLYIAVITTINSFQCFALIQLLTSGGPNYSTSTLMYYLYEKAFKLSEYGYANTMGVFLAVMIAIISFAQFKILGNDVEY

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=255, Percent_Identity=28.6274509803922, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI1789861, Length=296, Percent_Identity=24.3243243243243, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1790465, Length=257, Percent_Identity=24.9027237354086, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36426; Mature: 36426

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHEECCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]