Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is licR [H]
Identifier: 15674386
GI number: 15674386
Start: 164979
End: 166622
Strand: Direct
Name: licR [H]
Synonym: SPy_0181
Alternate gene names: 15674386
Gene position: 164979-166622 (Clockwise)
Preceding gene: 15674385
Following gene: 15674387
Centisome position: 8.91
GC content: 36.92
Gene sequence:
>1644_bases ATGATTTTAGATAAAAAGAGTTATGACTTGCTGTCTTATTTACTTAAACTAGAAACACCTGAGACAGTTATGGCCATTTC TCATGCTTTAAATCAGTCACGTCGTAAAGTTTATTACCAGCTTGACAAAATTAATCAGGCTTTGCCAAAGGGAGTAGATC AGATTATCTCTTATCCTAGACTTGGCATTCTTTTAACGGCGGATCAAAAAGCTGCTTGTCGCTTATTATTAGAAGAAGTG ACTGATTATAATTATGTCATGAAAAGTGATGAGCGCAGACGACTATCCTCGATTTATATTGCGGTTTCCACTGAGCGCGT GACCATTGATAAACTGATGCAGATCAATGATGTGTCTCGTAACACGATTTTAAATGACCTGACTGAGTTAAGGGAAGAAC TGGAAGACAAACAATACAAGATTCAGCTTCATGCGACAAAGGCTAGGGGATATTATTTTGGTTGTCATCCAATGGCTCTT ATTCAATACCTGTACAAATTGTTAGTGGACGTTTACCAAGGTGGCAATACTAGCTTTATTGATATATTCAACCGTAAACT CTCAGAGATACAAGGCTTATCGGTTTATTTTTCTAAAGATATTTTGACCTATTTTCATGAGTATCTTTTTTTATCTCAAG CTAGTTTAGGAAAGACAATTAATACCCAAGATAGCCAATTCATGTTGCAGATTTTACCTTTCATGCTTTTAAGTTATCGT AATATGCGTCTTGATTCAGAAACAAAGTCTGCTCTTAAACAAGAATTTCATTTGATTTGGAAACGTAAAGAATATCACAT TGCTCAGGACTTAGCTAGAGAGCTTTACCATAATTTTAAGCTTCATTTGGATGATATCGAAGTTAGTATGGTAGCGATGT TGATGTTGTCTTTTCGAAAAGATCAAGATCATCACGTGGAAAGTCAAGATTACGATGACATGCGAGCAACCATTAGTCAC TTTATTGACCAGTTGGAGAGCCGTTATCAGTTACATTTCACGCATAAACAGGATTTGCTGAAGCGGTTGACGACCCATTG TAAGGCGCTCGTTTACCGTAAAGCTTATGGGATTTTTTTAGTTAATCCCTTAACAGACCATGTTAAAGAAAAATACGAAG AATTGTTTGCTATGACTCAATCTTGTGCCACTATTTTGGAACAAGATTGGACGATTAGCTTGACAGACGATGATATTGCC TACTTGACTATCCATCTTGGGGGAGAGCTGCGTCACAATAATACAGAGCAAGAAAAGACCAAACTCGTTATTGTTTCAGA TGATGGGATAGGCATTCAAAAGTTATTGTTCAAACAGTGTCAAAGGTATCTAGCAAATGGTCAGATTGAAGCTGTTTTTA CGACAGAACAGTATCAGAGTGTTTACGATCTTTTAGCAGTCGATATGATTGTTGCTACTACAGATACGCTAAAGACTAAA ATCCCGATGCTTATTGTTAACCCTATTTTAAGTGACGATGATATCATCAAATTGATACGCTTTTCAAAGCAAGGACGCTT GAGTGAGCACTCCCGCTTTTCTACAGAGCTCACAAAAGCAATTGAAGCTGTTGTAAAAGATGAATCAGATCGTTATGCCT TGGTTTCTAAAATTGAAAAACTCATTCATCGCGAGCTGCTATGA
Upstream 100 bases:
>100_bases ATCTTATTATGGTGAGTTTTTAAAAACTTGGCTGCGCAGTCACTGAAATCATGATAAAATAAGCAAGGATGGATTTTCAG AGAGGAGGTTTGTAAACATG
Downstream 100 bases:
>100_bases GTAAGTGTTAAGTCGTCAAAGTACCTCAGTTTTCTATGACATAGAAAAATATAACTGAGGTTTTTAATATAGCTTTGAAT ACAGTATTGATGCGAGATAC
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MILDKKSYDLLSYLLKLETPETVMAISHALNQSRRKVYYQLDKINQALPKGVDQIISYPRLGILLTADQKAACRLLLEEV TDYNYVMKSDERRRLSSIYIAVSTERVTIDKLMQINDVSRNTILNDLTELREELEDKQYKIQLHATKARGYYFGCHPMAL IQYLYKLLVDVYQGGNTSFIDIFNRKLSEIQGLSVYFSKDILTYFHEYLFLSQASLGKTINTQDSQFMLQILPFMLLSYR NMRLDSETKSALKQEFHLIWKRKEYHIAQDLARELYHNFKLHLDDIEVSMVAMLMLSFRKDQDHHVESQDYDDMRATISH FIDQLESRYQLHFTHKQDLLKRLTTHCKALVYRKAYGIFLVNPLTDHVKEKYEELFAMTQSCATILEQDWTISLTDDDIA YLTIHLGGELRHNNTEQEKTKLVIVSDDGIGIQKLLFKQCQRYLANGQIEAVFTTEQYQSVYDLLAVDMIVATTDTLKTK IPMLIVNPILSDDDIIKLIRFSKQGRLSEHSRFSTELTKAIEAVVKDESDRYALVSKIEKLIHRELL
Sequences:
>Translated_547_residues MILDKKSYDLLSYLLKLETPETVMAISHALNQSRRKVYYQLDKINQALPKGVDQIISYPRLGILLTADQKAACRLLLEEV TDYNYVMKSDERRRLSSIYIAVSTERVTIDKLMQINDVSRNTILNDLTELREELEDKQYKIQLHATKARGYYFGCHPMAL IQYLYKLLVDVYQGGNTSFIDIFNRKLSEIQGLSVYFSKDILTYFHEYLFLSQASLGKTINTQDSQFMLQILPFMLLSYR NMRLDSETKSALKQEFHLIWKRKEYHIAQDLARELYHNFKLHLDDIEVSMVAMLMLSFRKDQDHHVESQDYDDMRATISH FIDQLESRYQLHFTHKQDLLKRLTTHCKALVYRKAYGIFLVNPLTDHVKEKYEELFAMTQSCATILEQDWTISLTDDDIA YLTIHLGGELRHNNTEQEKTKLVIVSDDGIGIQKLLFKQCQRYLANGQIEAVFTTEQYQSVYDLLAVDMIVATTDTLKTK IPMLIVNPILSDDDIIKLIRFSKQGRLSEHSRFSTELTKAIEAVVKDESDRYALVSKIEKLIHRELL >Mature_547_residues MILDKKSYDLLSYLLKLETPETVMAISHALNQSRRKVYYQLDKINQALPKGVDQIISYPRLGILLTADQKAACRLLLEEV TDYNYVMKSDERRRLSSIYIAVSTERVTIDKLMQINDVSRNTILNDLTELREELEDKQYKIQLHATKARGYYFGCHPMAL IQYLYKLLVDVYQGGNTSFIDIFNRKLSEIQGLSVYFSKDILTYFHEYLFLSQASLGKTINTQDSQFMLQILPFMLLSYR NMRLDSETKSALKQEFHLIWKRKEYHIAQDLARELYHNFKLHLDDIEVSMVAMLMLSFRKDQDHHVESQDYDDMRATISH FIDQLESRYQLHFTHKQDLLKRLTTHCKALVYRKAYGIFLVNPLTDHVKEKYEELFAMTQSCATILEQDWTISLTDDDIA YLTIHLGGELRHNNTEQEKTKLVIVSDDGIGIQKLLFKQCQRYLANGQIEAVFTTEQYQSVYDLLAVDMIVATTDTLKTK IPMLIVNPILSDDDIIKLIRFSKQGRLSEHSRFSTELTKAIEAVVKDESDRYALVSKIEKLIHRELL
Specific function: Positive regulator of the licABCH operon [H]
COG id: COG3711
COG function: function code K; Transcriptional antiterminator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 - InterPro: IPR007737 - InterPro: IPR011608 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR011991 [H]
Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 63932; Mature: 63932
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILDKKSYDLLSYLLKLETPETVMAISHALNQSRRKVYYQLDKINQALPKGVDQIISYPR CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LGILLTADQKAACRLLLEEVTDYNYVMKSDERRRLSSIYIAVSTERVTIDKLMQINDVSR CEEEEECCCHHHHHHHHHHHCCCHHHCCCCHHHHHEEEEEEEECCEEEHHHHHHHHCCHH NTILNDLTELREELEDKQYKIQLHATKARGYYFGCHPMALIQYLYKLLVDVYQGGNTSFI HHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHH DIFNRKLSEIQGLSVYFSKDILTYFHEYLFLSQASLGKTINTQDSQFMLQILPFMLLSYR HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH NMRLDSETKSALKQEFHLIWKRKEYHIAQDLARELYHNFKLHLDDIEVSMVAMLMLSFRK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHCC DQDHHVESQDYDDMRATISHFIDQLESRYQLHFTHKQDLLKRLTTHCKALVYRKAYGIFL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHCCEEE VNPLTDHVKEKYEELFAMTQSCATILEQDWTISLTDDDIAYLTIHLGGELRHNNTEQEKT ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCEECCCCCCCHHE KLVIVSDDGIGIQKLLFKQCQRYLANGQIEAVFTTEQYQSVYDLLAVDMIVATTDTLKTK EEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHC IPMLIVNPILSDDDIIKLIRFSKQGRLSEHSRFSTELTKAIEAVVKDESDRYALVSKIEK CCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LIHRELL HHHHHCC >Mature Secondary Structure MILDKKSYDLLSYLLKLETPETVMAISHALNQSRRKVYYQLDKINQALPKGVDQIISYPR CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LGILLTADQKAACRLLLEEVTDYNYVMKSDERRRLSSIYIAVSTERVTIDKLMQINDVSR CEEEEECCCHHHHHHHHHHHCCCHHHCCCCHHHHHEEEEEEEECCEEEHHHHHHHHCCHH NTILNDLTELREELEDKQYKIQLHATKARGYYFGCHPMALIQYLYKLLVDVYQGGNTSFI HHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHH DIFNRKLSEIQGLSVYFSKDILTYFHEYLFLSQASLGKTINTQDSQFMLQILPFMLLSYR HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH NMRLDSETKSALKQEFHLIWKRKEYHIAQDLARELYHNFKLHLDDIEVSMVAMLMLSFRK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHCC DQDHHVESQDYDDMRATISHFIDQLESRYQLHFTHKQDLLKRLTTHCKALVYRKAYGIFL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHCCEEE VNPLTDHVKEKYEELFAMTQSCATILEQDWTISLTDDDIAYLTIHLGGELRHNNTEQEKT ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCEECCCCCCCHHE KLVIVSDDGIGIQKLLFKQCQRYLANGQIEAVFTTEQYQSVYDLLAVDMIVATTDTLKTK EEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHC IPMLIVNPILSDDDIIKLIRFSKQGRLSEHSRFSTELTKAIEAVVKDESDRYALVSKIEK CCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LIHRELL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8990303; 8969509; 9384377; 10438772 [H]