Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is comYB [H]
Identifier: 15674325
GI number: 15674325
Start: 102554
End: 103402
Strand: Direct
Name: comYB [H]
Synonym: SPy_0102
Alternate gene names: 15674325
Gene position: 102554-103402 (Clockwise)
Preceding gene: 15674324
Following gene: 15674326
Centisome position: 5.54
GC content: 35.69
Gene sequence:
>849_bases ATGGAAGAGTCTTTATTAAAAGGACAAGGCTTAGCAGATATGTTGTCGGGTTTAGGTTTTTCAGATGCTATTCTTACTCA AATTAGTTTAGCTGATAGACACGGTAATATTGAAACAACATTAGTAGCGATTCAACATTACTTGAACCAAATGGCAAGGA TCAGACGAAAAACTGTTGAAGTTATCACCTATCCTCTTATTCTTTTACTTTTTCTTTTTGTGATGATGCTAGGGTTGAGA CGCTATTTAGTCCCTCAATTAGAAACTCAAAATCAGATAACTTACTTTCTTAACCATTTTCCTGCCTTCTTTATAGGTTT TTGCTCAGGTCTTATTTTGTTGTTCGGGATGGTATGGCTACGATGGCGATCTCAAAGCCGCTTGAAACTCTATAGTCGGC TAAGCCGTTATCCTTTTTTAGGTAAACTGTTAAAACAATACTTAACTAGTTATTATGCTAGAGAATGGGGTACGTTAATA GGTCAAGGTCTTGATTTGATGACTATTTTAGACATTATGGCCATTGAGAAATCCTCACTAATGAAAGAATTAGCTGAGGA CATCAGAATGAGTCTGCTTGAAGGGCAAGCCTTTCACATTAAAGTAGCTACCTACCCTTTTTTTAAAAAAGAATTAAGTT TAATGATTGAATACGGTGAAATCAAATCGAAACTGGGGGCTGAGTTGGAAATCTATGCCCAGGAAAGCTGGGAACAATTT TTTAGTCAGCTTTATCAAGTGACACAACTTATTCAACCAGCTATTTTTTTAGTAGTTGCTGTGACAATCGTCATGATTTA TGCGGCAATCCTATTACCAATTTACCAAAATATGGGAGGTATTTTTTAA
Upstream 100 bases:
>100_bases TCAATTACTAGCTAATCTTTTATCTACAGGATTTAGCTTCGCAGAGGTTATTGCTTTTTTAAAAAGAAGCCAGTTGCTTC AGCTAGATTATGTTCTTAAA
Downstream 100 bases:
>100_bases GATGATTAATCAATGGAACAACTTACGACACAAGAAGCTAAAAGGATTTACTCTTCTAGAAATGTTATTGGTGATTCTTG TCATCAGTGTTTTGATGCTA
Product: putative competence protein, ABC transporter subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MEESLLKGQGLADMLSGLGFSDAILTQISLADRHGNIETTLVAIQHYLNQMARIRRKTVEVITYPLILLLFLFVMMLGLR RYLVPQLETQNQITYFLNHFPAFFIGFCSGLILLFGMVWLRWRSQSRLKLYSRLSRYPFLGKLLKQYLTSYYAREWGTLI GQGLDLMTILDIMAIEKSSLMKELAEDIRMSLLEGQAFHIKVATYPFFKKELSLMIEYGEIKSKLGAELEIYAQESWEQF FSQLYQVTQLIQPAIFLVVAVTIVMIYAAILLPIYQNMGGIF
Sequences:
>Translated_282_residues MEESLLKGQGLADMLSGLGFSDAILTQISLADRHGNIETTLVAIQHYLNQMARIRRKTVEVITYPLILLLFLFVMMLGLR RYLVPQLETQNQITYFLNHFPAFFIGFCSGLILLFGMVWLRWRSQSRLKLYSRLSRYPFLGKLLKQYLTSYYAREWGTLI GQGLDLMTILDIMAIEKSSLMKELAEDIRMSLLEGQAFHIKVATYPFFKKELSLMIEYGEIKSKLGAELEIYAQESWEQF FSQLYQVTQLIQPAIFLVVAVTIVMIYAAILLPIYQNMGGIF >Mature_282_residues MEESLLKGQGLADMLSGLGFSDAILTQISLADRHGNIETTLVAIQHYLNQMARIRRKTVEVITYPLILLLFLFVMMLGLR RYLVPQLETQNQITYFLNHFPAFFIGFCSGLILLFGMVWLRWRSQSRLKLYSRLSRYPFLGKLLKQYLTSYYAREWGTLI GQGLDLMTILDIMAIEKSSLMKELAEDIRMSLLEGQAFHIKVATYPFFKKELSLMIEYGEIKSKLGAELEIYAQESWEQF FSQLYQVTQLIQPAIFLVVAVTIVMIYAAILLPIYQNMGGIF
Specific function: Involved in the translocation of the type IV pilin (pilA) [H]
COG id: COG1459
COG function: function code NU; Type II secretory pathway, component PulF
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP F family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003004 - InterPro: IPR018076 - InterPro: IPR001992 [H]
Pfam domain/function: PF00482 GSPII_F [H]
EC number: NA
Molecular weight: Translated: 32561; Mature: 32561
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEESLLKGQGLADMLSGLGFSDAILTQISLADRHGNIETTLVAIQHYLNQMARIRRKTVE CCCCHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VITYPLILLLFLFVMMLGLRRYLVPQLETQNQITYFLNHFPAFFIGFCSGLILLFGMVWL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWRSQSRLKLYSRLSRYPFLGKLLKQYLTSYYAREWGTLIGQGLDLMTILDIMAIEKSSL HHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH MKELAEDIRMSLLEGQAFHIKVATYPFFKKELSLMIEYGEIKSKLGAELEIYAQESWEQF HHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHH FSQLYQVTQLIQPAIFLVVAVTIVMIYAAILLPIYQNMGGIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEESLLKGQGLADMLSGLGFSDAILTQISLADRHGNIETTLVAIQHYLNQMARIRRKTVE CCCCHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VITYPLILLLFLFVMMLGLRRYLVPQLETQNQITYFLNHFPAFFIGFCSGLILLFGMVWL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWRSQSRLKLYSRLSRYPFLGKLLKQYLTSYYAREWGTLIGQGLDLMTILDIMAIEKSSL HHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH MKELAEDIRMSLLEGQAFHIKVATYPFFKKELSLMIEYGEIKSKLGAELEIYAQESWEQF HHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHH FSQLYQVTQLIQPAIFLVVAVTIVMIYAAILLPIYQNMGGIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7905475 [H]