Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
---|---|
Accession | NC_002737 |
Length | 1,852,441 |
Click here to switch to the map view.
The map label for this gene is infA
Identifier: 15674309
GI number: 15674309
Start: 75934
End: 76152
Strand: Direct
Name: infA
Synonym: SPy_0075
Alternate gene names: 15674309
Gene position: 75934-76152 (Clockwise)
Preceding gene: 15674308
Following gene: 15674310
Centisome position: 4.1
GC content: 36.99
Gene sequence:
>219_bases GTGGCAAAAGAAGACGTGATTGAAATTGAAGGCAAAGTAGTAGAAACGATGCCAAATGCAATGTTTACTGTTGAATTGGA AAATGGACATCAAATTCTAGCAACTGTATCAGGAAAAATCCGCAAAAATTACATTCGTATTTTAGTAGGTGACCGTGTTA CAGTAGAAATGAGTCCTTATGACTTGACACGTGGACGCATCACATACCGCTTTAAATAA
Upstream 100 bases:
>100_bases GCATAAGTAGATTAGTAATGATATACTAGTTTAGTCTGACTTATAATTGTTACCTCTGTGCTCAGAGGACATCAAATCGA AATTTAGGGGGTACTTTTGC
Downstream 100 bases:
>100_bases TCGAAATAATTGGAGGGATTAAAACATGAAGGTAAGACCATCGGTTAAACCAATTTGCGAATACTGTAAAGTTATTCGCC GTAATGGTCGTGTTATGGTA
Product: translation initiation factor IF-1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPYDLTRGRITYRFK
Sequences:
>Translated_72_residues MAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPYDLTRGRITYRFK >Mature_71_residues AKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPYDLTRGRITYRFK
Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3
COG id: COG0361
COG function: function code J; Translation initiation factor 1 (IF-1)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 S1-like domain
Homologues:
Organism=Escherichia coli, GI1787110, Length=70, Percent_Identity=68.5714285714286, Blast_Score=108, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): IF1_STRA1 (Q3K3U7)
Other databases:
- EMBL: CP000114 - RefSeq: YP_328806.1 - ProteinModelPortal: Q3K3U7 - SMR: Q3K3U7 - EnsemblBacteria: EBSTRT00000005260 - GeneID: 3685061 - GenomeReviews: CP000114_GR - KEGG: sak:SAK_0113 - TIGR: SAK_0113 - GeneTree: EBGT00050000027175 - HOGENOM: HBG286099 - OMA: KMRMHFI - ProtClustDB: PRK00276 - BioCyc: SAGA205921:SAK_0113-MONOMER - GO: GO:0005737 - HAMAP: MF_00075 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR022967 - InterPro: IPR006196 - InterPro: IPR004368 - Gene3D: G3DSA:2.40.50.140 - SMART: SM00316 - TIGRFAMs: TIGR00008
Pfam domain/function: PF01176 eIF-1a; SSF50249 Nucleic_acid_OB
EC number: NA
Molecular weight: Translated: 8273; Mature: 8142
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS50832 S1_IF1_TYPE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPY CCCCCEEEECCEEEECCCCEEEEEEECCCCEEEEEECCCEEEEEEEEEECCEEEEEECCC DLTRGRITYRFK CCCCCEEEEEEC >Mature Secondary Structure AKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPY CCCCEEEECCEEEECCCCEEEEEEECCCCEEEEEECCCEEEEEEEEEECCEEEEEECCC DLTRGRITYRFK CCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA