Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ytgD
Identifier: 15673878
GI number: 15673878
Start: 1962954
End: 1963328
Strand: Reverse
Name: ytgD
Synonym: L146384
Alternate gene names: NA
Gene position: 1963328-1962954 (Counterclockwise)
Preceding gene: 15673879
Following gene: 15673877
Centisome position: 83.0
GC content: 30.93
Gene sequence:
>375_bases ATGCAGAAAATAGAACTTTTTCAACAAACAATTGACGCATGGTTAAATAAAGACATCAAAAAGTTACTGATAATTTTATC AGAAGATATTTTATGGACAGAATATTTCGGCGCTCAGTATCAAGGAAAAGCTGAAATTGAAAAATGGTTCTGTCAGTGCA ATAATCCTGTGGAAAACAAAGTTAAGTCATGGACTGTGGATAAATATTATGTGGATAATGAGACTGCTTTATTCACATGG ACTTTCCGGTGTTTTTATGAAGGTAAAGAAGGCATTCTTGATGGAATTTCTCTTGTTAAATTTTCCGGAAATAAAATTTG TGAAATTCAAGAATTTGAACAAAAACATGAAAAATTTCGGCCATTTTTGAAATGA
Upstream 100 bases:
>100_bases TTACGAGTATTGATTGATAGTGAGCCACAAAATTTTGTATAAAAATTTCCACAGGTGGAAAAGTTAAGAATTTGAAAACA AAAGAAAGTTGGTGTGGAAA
Downstream 100 bases:
>100_bases AATGAGGTAAATATGTTTGAGAAATTCGATTTATTGAAGCATTTTGGAGTCTATGGTGTGGCAATTGACAATGAGAAATT ACTTGTCATTGAAAAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MQKIELFQQTIDAWLNKDIKKLLIILSEDILWTEYFGAQYQGKAEIEKWFCQCNNPVENKVKSWTVDKYYVDNETALFTW TFRCFYEGKEGILDGISLVKFSGNKICEIQEFEQKHEKFRPFLK
Sequences:
>Translated_124_residues MQKIELFQQTIDAWLNKDIKKLLIILSEDILWTEYFGAQYQGKAEIEKWFCQCNNPVENKVKSWTVDKYYVDNETALFTW TFRCFYEGKEGILDGISLVKFSGNKICEIQEFEQKHEKFRPFLK >Mature_124_residues MQKIELFQQTIDAWLNKDIKKLLIILSEDILWTEYFGAQYQGKAEIEKWFCQCNNPVENKVKSWTVDKYYVDNETALFTW TFRCFYEGKEGILDGISLVKFSGNKICEIQEFEQKHEKFRPFLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14879; Mature: 14879
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKIELFQQTIDAWLNKDIKKLLIILSEDILWTEYFGAQYQGKAEIEKWFCQCNNPVENK CCHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHH VKSWTVDKYYVDNETALFTWTFRCFYEGKEGILDGISLVKFSGNKICEIQEFEQKHEKFR HHCEECCEEEECCCEEEEEEEEEEEECCCCCHHCCHHEEEECCCCEEHHHHHHHHHHHCC PFLK CCCC >Mature Secondary Structure MQKIELFQQTIDAWLNKDIKKLLIILSEDILWTEYFGAQYQGKAEIEKWFCQCNNPVENK CCHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHH VKSWTVDKYYVDNETALFTWTFRCFYEGKEGILDGISLVKFSGNKICEIQEFEQKHEKFR HHCEECCEEEECCCEEEEEEEEEEEECCCCCHHCCHHEEEECCCCEEHHHHHHHHHHHCC PFLK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA